Halobaculum roseum: K6T36_13015
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Entry
K6T36_13015 CDS
T07547
Name
(GenBank) single-stranded DNA binding protein
KO
K07466
replication factor A1
Organism
hre
Halobaculum roseum
Pathway
hre03030
DNA replication
hre03420
Nucleotide excision repair
hre03430
Mismatch repair
hre03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K6T36_13015
03420 Nucleotide excision repair
K6T36_13015
03430 Mismatch repair
K6T36_13015
03440 Homologous recombination
K6T36_13015
03460 Fanconi anemia pathway
K6T36_13015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hre03000
]
K6T36_13015
03032 DNA replication proteins [BR:
hre03032
]
K6T36_13015
03400 DNA repair and recombination proteins [BR:
hre03400
]
K6T36_13015
Transcription factors [BR:
hre03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
K6T36_13015
DNA replication proteins [BR:
hre03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
K6T36_13015
DNA repair and recombination proteins [BR:
hre03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
K6T36_13015
MMR (mismatch excision repair)
K6T36_13015
DSBR (double strand breaks repair)
HR (homologous recombination)
K6T36_13015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
OB_MEIOB_N
OB_Ssb-like
EF-G_D2
Motif
Other DBs
NCBI-ProteinID:
QZY02210
LinkDB
All DBs
Position
complement(2550953..2552404)
Genome browser
AA seq
483 aa
AA seq
DB search
MGAIEDVYDDLDADVPFEEFEAAVEQKVEDMGGLADEETAAMLIAHELRDEEVNSVADIE
PGMDDVKFLAKVMTVGEVRTFERDGEDEDGHVLNVEVADESGRITISLWDQVAVDAKENL
QAGDVLRIMGRPKEGYSGLEVAVDKVEPDPDAEVDVEAVEQYRVEDLTMGASDVDLLGVI
LDTDTVRTFDRDDGTEGKVSNMTVGDETGRVRVTMWDEMADRVEELAAGTTVEVVDGYVR
ERDGDLELHVGSRGAIEEVDEDVEYVPETTDIDDLELEDVVDIAGGVIETSEKRTFDRDD
GSQGQVRNVRIKDDTGEIRVALWGDKADRDIDLADRVVFTDVEVQDGWQDDLEASAGWRS
SVTVLEDAAGGTADDAAGASGRDAGQGGLDSFESTGSSADSSSESTAAATAEADGDEATG
ADASDDGGVVEFTGTVVQAGDPVVLDDGTETRSVETSANLRLGEEVTVRGVERDGTIDAD
DVF
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgggcgctatcgaggacgtctacgacgacctggacgccgacgtccccttcgaggagttc
gaggccgccgtcgagcagaaggtcgaggacatgggcgggctggccgacgaggagaccgcg
gcgatgctcatcgcccacgagctgcgcgacgaggaggtcaacagcgtcgccgacatcgag
ccggggatggacgacgtgaagttcctcgcgaaggtgatgaccgtcggcgaggtgcgcacc
ttcgagcgcgacggcgaggacgaggacggccacgtcctcaacgtcgaggtcgccgacgag
tccggccggatcaccatctcgctgtgggaccaggtcgccgtcgacgcgaaggagaacctc
caggcgggcgacgtgctccggatcatgggtcgcccgaaggaggggtacagcgggctggag
gtcgccgtcgacaaggtcgaacccgacccggacgccgaggtcgacgtggaggcggtcgaa
cagtaccgcgtcgaggacctcacgatgggcgcctccgacgtggacctgctgggcgtgatc
ctcgacaccgacaccgtccggacgttcgaccgcgacgacggcaccgaggggaaggtgtcg
aacatgaccgtcggcgacgagaccggtcgcgtgcgcgtcaccatgtgggacgagatggcc
gaccgcgtcgaggaactggcggccggcacgacggtcgaggtcgtcgacggctacgtccgc
gagcgcgacggcgacctcgagctccacgtcggctcccggggcgccatcgaggaggtcgac
gaggacgtggagtacgtccccgagacgaccgacatcgacgacctggagctggaggacgtg
gtcgacatcgccggcggcgtcatcgagacgagcgagaagcgtacgttcgaccgcgacgac
ggctcgcagggacaggtcaggaacgtccgcatcaaggacgacaccggcgagatccgggtg
gccctgtggggcgacaaggccgaccgcgacatcgacctcgcggaccgcgtcgtcttcacc
gacgtggaggtccaggacggctggcaggacgacctcgaagcctccgccggctggcgctcc
tcggtgaccgtgctggaggacgccgccggcggaaccgccgacgacgcggccggggcgagc
ggccgcgacgcgggtcagggcggcctcgattccttcgagtcgaccggttcgtccgccgac
agttcgtccgagtcgaccgccgcggcgacggccgaggccgacggcgacgaggcgaccggc
gcggacgcgagcgacgacggcggcgtcgtggagttcaccgggacggtcgtgcaggcgggc
gacccggtcgtcctcgacgacggcacggagacgcggtcggtcgagacctcggcgaacctc
cgcctcggcgaggaggtaaccgtccgcggcgtcgagcgcgacgggaccatcgacgccgac
gacgtgttctga
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integrated database retrieval system
