Halobaculum roseum: K6T36_18790
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Entry
K6T36_18790 CDS
T07547
Name
(GenBank) transcription factor
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
hre
Halobaculum roseum
Pathway
hre03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hre00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
K6T36_18790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hre03000
]
K6T36_18790
03021 Transcription machinery [BR:
hre03021
]
K6T36_18790
Transcription factors [BR:
hre03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
K6T36_18790
Transcription machinery [BR:
hre03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
K6T36_18790
RNA polymerase III system
TFIIIB
K6T36_18790
RNA polymerase I system
SL1/TIF-1B
K6T36_18790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
NusA_N
DUF6206
Peptidase_M16_C
DUF5591
Motif
Other DBs
NCBI-ProteinID:
QZY04783
LinkDB
All DBs
Position
unnamed3:complement(153633..154181)
Genome browser
AA seq
182 aa
AA seq
DB search
METVSTMGSGSLGREVDLETLVAEIENALGQSVEANFTSDSIVTLRLDEDGPAYTVYRTG
TFQVRGAASEDELAAAEDTFLDVLDEIGVDVPEYEFEHVTSVLMTDLERDVNLSALAVSL
GLESTEYEPEQFPGVVYRPERFDCVLLVFGSGKVIVTGGWSREEAEYALDTLKEHVDEIA
ST
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atggagacggtcagcacgatggggagcggcagtctcggacgcgaggtggacttggagact
ctcgtggccgagattgagaacgcgctcgggcaatcagtcgaagcgaacttcaccagcgac
agcatcgtcaccctgcggttggacgaggacggcccggcgtacacggtctaccgcacgggc
acgttccaagtccggggcgcagcgtcggaggacgagctggcggccgccgaggacaccttc
ctcgacgtgctggacgagatcggcgtggacgtgccggagtacgagttcgagcacgtcacc
tcggtgttaatgactgacctcgagcgtgacgtgaacctgtctgcgctggccgtttcactc
ggcttggagtccaccgagtacgagccggagcaattccccggcgtggtgtacagacccgag
aggttcgattgcgttctgttggtgttcggctcggggaaggtgatcgtgacgggcggctgg
agcagagaggaggcggagtacgcgctcgacacgctgaaggaacatgtggacgagatcgcg
tccacgtag
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