Haliotis rufescens (red abalone): 124110772
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Entry
124110772 CDS
T07893
Name
(RefSeq) ubiquitin conjugation factor E4 B-like
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04120
Ubiquitin mediated proteolysis
hrf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124110772
04120 Ubiquitin mediated proteolysis
124110772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124110772
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124110772
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
U-box type E3
124110772
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
MtlR
Motif
Other DBs
NCBI-GeneID:
124110772
NCBI-ProteinID:
XP_048250307
LinkDB
All DBs
Position
Unknown
AA seq
1110 aa
AA seq
DB search
MSELTPDEIRRRRLARLGGNQSSPVERNEASQASPMQQGSESQQSSQSTASSSGSLGVDC
PAATPQTMDMDTEFCSEKNSQSQMDVDSGIETMEVEEPEPRPEIKRKRDVSFGSEASEEQ
VLSAVSRVFVTSWREKSCETLHLPQLVEVVDEACSGGNIDYSDVVSQVLMEVLMLMRDSQ
ENPVLLLRTHPPALSPLKSYSSSPRSISPMMSPEHFNREFSEKFPLAKCKEVDMLNYLLD
CYDRVAVEERTAPKRCSIPPMSDMLSTARSQCICHTALVLQGAFVQQRSLNGVSNLLPFL
LAHNLPRGFLPELVQTIYHDRDSFRRVFTPILQSLMRLIQTMSLDTDDYRDPLSVIAELC
DIRSGNARPICNLMIEQKNWLPEVVSQASGMELEKLSFLGPVLGLSVFAEDNVKVVEQFF
SGHQLTTDSTRLINQSLQHRLEYVRSEVFKVVHSLLVNVETRDSAMSFLASALMRNAKRS
QIHVDERFVSGDGFILNLMSVLQQLSVKIMLDKVDPYYPFHPKARVSTKSESRLHSTTAE
ADKWMDDLNSKPNPPWQDPKFPTECFFLTLHCHHLSITPIMRKYQRRLRAIRDLNRMVEE
MEGTEPQWKILPTAGRNRDMLKKWKSQVQRLQKSKLCADAGVLDANMLRKCLQFYTLVAE
FVIKAADPQKHGSRLPLPTEVPMQFSALPEFYVEDIADFLLFVLQYNPQILDDPATTKIL
QLLIVLVCNGSYISNPYLVAKLVEVMFVLQPTVQPKAEKLNEALLLHPLALEFLSPALML
FYTEIETTGASSEFYDKFTIRYHLSIIFKTMWGMPAHQSRLVEEANNNKHFVKFVNMLMN
DTTFLLDESLDCLKRIHEVQELMDNKAQWDAQPKDQQQSRQRQLAMDERQCRSYLTLATE
TVDMFHYLTEKIQRPFLIPELADRLAAMLNFNLQQLCGSKCKNLKVKNQEKYGWEPKKLL
NSLTDIYLHLDCEDFAKAIANDERSYRKELFEDAVLRMIKACIKTEAEITKFRQLQNSVD
DLVTQKTKAELDYGDIPDEFKDPLMDTLMEDPVLLPSGHIMDRPIIIRHLLNSQTDPFNR
QPLTEEQLTPDLELKKKIQAWKKSKRGDST
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaattaactcccgacgagattcggaggagacgccttgcccgccttggaggcaac
cagtccagtcctgtagaaaggaatgaagctagtcaagcatcacccatgcagcagggctct
gagagccagcagtcatctcaaagtacagcatcctcatctggcagccttggtgttgattgc
ccagcagctactcctcagaccatggacatggacaccgaattttgctccgaaaaaaactcc
cagtctcagatggatgtggattctggcatcgagacaatggaggtcgaagaaccagaaccc
agacctgaaatcaagaggaaaagggatgtcagctttggatctgaagcaagtgaggaacaa
gtgttatcggctgtcagtcgtgtgtttgtgacttcctggagagagaaatcgtgtgaaact
cttcatttgcctcagttagtggaggtggtagacgaggcatgtagtgggggtaacattgac
tatagtgacgttgtcagccaggtgctcatggaggttctcatgctgatgagggacagccag
gagaaccctgtgctgttgttacgcacacatcccccagctctgtcccccctcaagtcctac
agcagcagcccaagaagtataagtccgatgatgtctccagaacacttcaatagagaattc
tcagaaaaatttcctcttgccaaatgtaaagaagtagacatgctgaactacctgttagat
tgttatgacagagtagcagtggaggagaggactgcccccaagcgatgcagcattcctcca
atgagtgacatgttgtctacagccagaagtcagtgtatttgtcatacagcactcgtatta
caaggtgcttttgtacaacaaaggtcactgaatggagtgtctaatctgctgccgtttctc
ctggctcacaacttaccgcggggatttctccccgagttggtgcagaccatctaccatgat
agggacagtttccgcagggtatttacgccgatcctccagagcttgatgaggttgatacag
accatgtccctggacactgatgactaccgcgaccccctctctgtgatagctgagttgtgt
gatattaggagcggcaatgctcggcctatatgtaacttaatgatagaacagaagaactgg
ctgccggaagttgtgagtcaagccagtgggatggagcttgagaagttgtctttccttgga
ccagtcctcggcctctcagtcttcgctgaggataatgtcaaagtagtggagcagttcttc
tctgggcatcagctgacaacagacagtacccgtctcatcaaccagtctctacagcatagg
ctggaatatgtcaggtctgaagttttcaaagtcgtccactccctcctagtaaatgtggaa
accagggattcagccatgtccttcctggcgtccgctctcatgagaaatgccaaacgctca
cagatccatgttgatgaaaggtttgtgtcaggcgatggcttcatactcaaccttatgtct
gtgctacagcagctgtcggtgaagataatgttggacaaggttgacccctactatccattc
caccccaaggccagggtgtccaccaagtcggaatctcgcctccacagtacaacagctgaa
gcagacaaatggatggatgatctcaatagtaaacctaacccaccatggcaagatcccaag
tttccaaccgagtgtttcttcctcacccttcactgtcatcacttgtctattactcccatc
atgcgtaaatatcagcgccgacttcgtgcaatccgagatctcaaccgcatggtggaggag
atggagggcacagagccacagtggaagatcctgcctacagcgggcaggaacagggacatg
ctcaagaagtggaagtctcaggtccagaggctacagaagagcaagctgtgtgcagatgct
ggagtgttggatgccaacatgttgcgcaagtgtctccagttctacaccttggtagccgag
tttgtcatcaaggcagcagatccacaaaagcatgggtctcgccttccactgcctacagaa
gttcctatgcaattttcagcattacccgagttctacgtggaggacatagccgacttcctc
ctctttgttctccagtacaatccacagattctggatgacccagcgaccaccaagatcctg
cagctcctcatcgtgctggtgtgtaacgggtcgtacatcagcaacccctacctagtggcc
aagctggtggaggtgatgttcgtcctgcagcccacagtgcagcccaaggcagagaagctc
aatgaagccttgctgctgcaccctctagccctggagttcctgtctccagctctcatgctg
ttctatacagaaattgaaacaaccggtgccagtagtgaattctatgacaagttcaccatc
agatatcacctgagtatcatcttcaagacaatgtggggcatgccggcccatcagtcgcga
ctcgtggaagaggcaaataacaacaagcactttgtaaagtttgttaacatgttgatgaat
gacaccaccttcttgctggacgagagtttggactgtctgaaaagaatccacgaagtccag
gagctcatggacaacaaggctcagtgggatgcccagccaaaggatcaacaacagtctcga
caaagacagctagctatggatgaacgccaatgtcggtcctatctaacactagccacagag
acagttgacatgtttcactatctcacagaaaaaatacagcgccccttcctcataccagaa
ctagcagaccgactggcagcaatgttgaactttaacctgcagcaactttgtggctccaag
tgtaagaatctgaaggtgaagaaccaagagaagtatggctgggagcccaagaagctgctc
aacagcctgaccgacatctacctgcacctcgactgtgaagactttgcaaaggctatagcc
aatgatgagagatcctacaggaaggaactgtttgaagatgctgtgttacggatgatcaaa
gcttgtataaagacagaggcagagattaccaagttccgtcagctccagaacagtgtggat
gatcttgtaacacagaaaacaaaagcagagttagactatggtgacataccagatgaattt
aaagacccgttgatggacactctgatggaggacccagtattactgcccagtggtcacatc
atggaccggccgatcatcatccgccacctcctcaactcacagactgaccccttcaaccga
cagcccctcacagaggagcagctaacaccagaccttgaactaaagaagaaaatacaagcg
tggaaaaagtccaagagaggcgattcaacgtga
DBGET
integrated database retrieval system
