Haliotis rufescens (red abalone): 124110904
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Entry
124110904 CDS
T07893
Name
(RefSeq) deoxyribodipyrimidine photo-lyase-like isoform X1
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124110904
Enzymes [BR:
hrf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
124110904
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
124110904
Prokaryotic type
124110904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_photolyase
DUF6218
Motif
Other DBs
NCBI-GeneID:
124110904
NCBI-ProteinID:
XP_048250001
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MWSCAKLIHCGTGQLRSRQGLHLTHQLSSVPILYLVGLSSKMSGNGKSNKLKRKAEEDSG
SPEKRLKAETSKTSVDFLNDITENRQSVCESVCKFKFNKKRVRVLSAAKEFPDDCDGVVY
WMSRDQRVQDNWAFLYAQRLALKMEVPLHVCFCLVPRFLEATIRQFGFMLTGLQEVEQEC
KTLNISFHLLIGYAKDVLPDFVKDNNIGGVVTDFAPLRTPMAWVTDVKERLPKDIPMCQI
DAHNIVPCWEASPKLEYGARTIRKKITEKLPEFLTAFPPVCKHPHNATVKSEPVKWEAAY
ASLEVDRSVKEVDWAIPGTKGGLQMLESFCKDRLKYFNADRNNPNKNAVSNLSPWIHFGQ
ISVQRCILTVKQFRSKGTESVNAFIEEAVVRRELADNFCFYNKHYDSIEGAYDWAKTSLK
LHAGDKRPYLYSRQQLEDGKTHDKLWNAAQLQMVNEGKMHGFLRMYWAKKILEWTRSPED
ALKDSIFLNDKYNLDGRDPNGYVGCMWSICGIHDQGWKEREVFGKIRYMNYKGCTRKFDV
PAFERKYKVKKI
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgtggagctgtgccaaactgattcattgtgggacgggtcagcttagatcaagacagggt
ctacatttaacacatcaactcagctcagttcctatcttgtaccttgtgggactttcttcc
aaaatgagtgggaatggaaagtccaataagttgaaaagaaaagccgaagaagattctggg
agtcctgaaaaaaggttgaaagcagaaacaagcaaaacatctgttgattttctaaatgat
atcacagaaaatcgtcagtctgtttgtgaatctgtttgtaagttcaaattcaacaagaaa
agagtgagagtgttgtcagcagccaaagagttccccgatgactgcgatggcgttgtgtat
tggatgtccagggatcagagagtacaagacaactgggccttcctgtacgctcagcgtctg
gccctaaagatggaggtgccacttcacgtctgcttctgtctggtgccacggttcctggag
gctacgattcggcagttcggcttcatgctcacgggactccaggaagtggaacaggagtgt
aagacactgaacatatcatttcacctgctgatcggctacgcgaaggatgtcctgccggac
ttcgttaaggacaacaacataggtggtgtggtcactgactttgccccgctgcgtaccccc
atggcctgggtcactgatgtgaaagagaggctgccgaaagatatcccaatgtgtcagatc
gatgctcataacattgtgccttgttgggaggcgtcgcccaagttagaatatggagcccgc
acaatacgcaagaaaataacagaaaaactcccagaattcctcactgcatttccacctgtg
tgtaaacaccctcataatgccacagttaaatctgaacctgtcaagtgggaggcggcctac
gccagcctggaggtggaccgttccgtgaaggaggtggactgggccatcccaggaaccaag
gggggtcttcagatgctggagtcattctgtaaagaccgactgaaatatttcaacgctgat
cgcaacaatcctaataagaatgctgtcagtaacctgtcaccatggatacattttgggcaa
atctcagttcagagatgtatactgactgtgaagcagtttcgcagcaagggaactgagagc
gtgaacgcgttcatcgaagaggcagtggtgagacgcgagctggctgacaacttctgcttc
tacaacaaacattatgattccattgaaggagcatacgactgggcgaagacatcactgaag
ttgcatgctggggacaagcggccatatttgtactctcgccagcagctggaggacggaaag
actcatgacaagctctggaatgctgcccagttgcagatggtgaatgagggaaagatgcac
ggtttcctgaggatgtactgggccaagaaaatcctcgagtggacccgttctccggaggac
gctctcaaggactccatcttcctcaacgacaagtacaacttggatggtcgagatcctaac
ggttacgttggatgcatgtggtcaatctgtggcatccacgaccagggctggaaggagcgc
gaagtgttcggcaagatccgctacatgaactacaagggctgcaccaggaagtttgatgtg
ccggcgtttgaaaggaaatacaaagttaagaagatatga
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