Haliotis rufescens (red abalone): 124111350
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Entry
124111350 CDS
T07893
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124111350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124111350
03110 Chaperones and folding catalysts [BR:
hrf03110
]
124111350
04121 Ubiquitin system [BR:
hrf04121
]
124111350
Enzymes [BR:
hrf01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
124111350
Spliceosome [BR:
hrf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124111350
Complex C
U4/U6.U5 tri-SnRNP related factors
124111350
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
124111350
Chaperones and folding catalysts [BR:
hrf03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
124111350
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
U-box type E3
124111350
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
FOXO_KIX_bdg
Motif
Other DBs
NCBI-GeneID:
124111350
NCBI-ProteinID:
XP_046326965
LinkDB
All DBs
Position
Unknown
AA seq
526 aa
AA seq
DB search
MGKKQHQKDKLYLTTTEWRNEWGGYKGKQNTGQNARFRRLPFHCCSLSLQPFEHPLCTKE
GIIFDLMNIYPFLKKYGVSPVTGEKMTSKDLTKLTFHKNAKDRYHCPVTYRIFNENTHIV
AIKTTGNVYSYEAVERLNLKVTNLRDLLTDESFTRRDILTIQDPTNLDKFNMSDFYHIKN
NLKVPDEDSELSKTDPKYRLKNINSEARDALEELDRDYKPKDLHLLGITNEQKAKADKFN
AASYSTGAVSASFTSTAVTPQTEQESALIHEDVLRYERVRKKGYVRMVTSHGTLNIEIFC
DMVPKTCENFMQLCGRGYYNGLIFHRSIRNFIVQGGDPTGTGKGGESCWGPAFKDEFKPN
LTHTGRGMLSMANSGPNTNTSQFFFTYRSARHLDGKHAVFGKIVGGLETLDKMEAIEVNK
HDKPKEEIKIENVIVFVNPFDEADEQLKKEREDELEKQKAAAEAERKKKERRKMEEEGPR
VFKKGVGKYINMSTLKRSKDEEDASSETVKKKKTKGEYSFGDFSAW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagcatcagaaagataaactgtacctgaccaccactgagtggaggaat
gagtggggtggctacaaagggaaacagaacacggggcaaaatgccagattcaggagacta
cctttccactgctgcagtctgtctctgcagccatttgaacatccactgtgcaccaaggaa
ggaataatttttgacttaatgaacatttatcccttcttgaagaagtatggagtgagccca
gttactggagagaaaatgacctccaaggacctgaccaagctgacatttcataagaatgct
aaagaccgctatcactgcccagtcacctacaggatattcaacgagaacactcacatcgtg
gccatcaagaccacaggcaatgtgtattcctatgaggctgttgagagactgaacctgaaa
gtgaccaaccttcgggatctgttgaccgacgagtcgtttactcggagggacatccttacc
atccaggatcctacaaacttggacaagttcaacatgtcagatttctaccacatcaaaaac
aacttgaaagttcctgatgaagacagcgagctgtccaagactgaccccaagtaccgcctg
aagaacatcaactcagaggcccgggatgcgcttgaagaactggaccgcgactacaaaccc
aaggatctccacctgctgggtattacaaatgagcagaaagccaaggcagacaagttcaat
gccgcatcctactcaactggggcagtatcagcctccttcacgtccactgcagtgaccccg
cagacggagcaggagtctgctctgatccatgaagacgtcttgagatatgagcgtgtccgc
aaaaagggttacgtgaggatggtgacaagccacggcaccctcaacatagagatcttctgt
gacatggtgcccaaaacgtgcgagaacttcatgcagctgtgtggcagggggtactacaac
ggactgatattccaccggtccatcaggaacttcattgtccaaggtggagatccaaccggc
accgggaagggtggagaatcatgctggggtcctgccttcaaggacgagttcaaacccaac
ctgacccacacaggcagagggatgctgagcatggccaacagcgggcccaacactaacacg
tctcagttcttcttcacatataggtccgcccgacatctggatggtaaacatgctgtgttt
ggcaagattgttggtggtttggagaccttggacaaaatggaagctattgaagtcaacaaa
catgacaaaccaaaggaagaaatcaagattgagaatgtcatcgtgtttgtgaacccgttt
gatgaagcggatgaacagctgaagaaagaaagagaagatgaacttgagaaacagaaggca
gcagcagaagcagagcggaagaagaaggaacggaggaagatggaggaagagggaccacgt
gttttcaagaagggtgttgggaaatacatcaacatgtcaacacttaagcgaagtaaggac
gaggaagatgcttcctcagagacagtcaagaagaagaagacaaaaggagaatactcattt
ggggacttcagtgcctggtga
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