Haliotis rufescens (red abalone): 124112106
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Entry
124112106 CDS
T07893
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124112106
03041 Spliceosome [BR:
hrf03041
]
124112106
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124112106
Spliceosome [BR:
hrf03041
]
Complex C
Other components
EJC/TREX
124112106
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
124112106
NCBI-ProteinID:
XP_046328027
LinkDB
All DBs
Position
Unknown
AA seq
750 aa
AA seq
DB search
MPDEMEKAPKPNMNSSALIDLKAELYRKQEEFKQLKNTTGTRIKGRTQEKTTPDLFSRKN
KGVLERAQRDLEEKVEEEDVLVRSRRALEAKAKLYDKISSSSEIPEEDGSGVFLVDFQKK
VIDNIVEARDREYSKGRQLPADNQDEEEMLSDTVPPPSDPQEEWVDYTDSLGRSRRCMKK
DLPQLIQQDKDMAKVRGEDSSRPPPPEDEDTPSLMSSDMHRELLRQKWEKEEQEALQQSN
IHYANVQFDEIRTHGVGFYQFDKDTDKRQEQMDTLNKLRDQTVDERGRRERLKEKRKAML
DARLAKVKQRRRLKEGAPLAEEPATEEEIGPRLEEMLSGQRCKPERTEVKQENPEVEPLK
RDDSWKKDAPEREWDKGKEKTLAFKEERYFSQRRDERLNEFAPPSAYFDSPPVRQPPKTK
SAFGKPYNISNTDLKPKTVVLTRESIQAKHQPQPEIVDVSAIPLPTNIRKSDCTSEDNKQ
DAMKTSMISKAPGAPPGLAPHVDFSVPPPGFQPPPQWGPYPSVPPSSSMYPGHDGFLSGS
VMAGVGHQLPDTSVPPPNTFIQPPNSYVPPLNSSVQPLNTSVPPPNTWVSPPGVSLGPPE
STPADATEEQADASTPSSYPIPHTHSSGTSGADVMEKPIFVPRTAVLDTRLVQNEDSEAP
TVCGGVPDVLAQPYQPGSFMAALQAQHQATEDLATASREKAHFRGGPVIYKHEPVVTVTE
KAVVESESVSCEQSTEDVVAAFLKQIKDKV
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcctgacgaaatggaaaaagcgcccaagccaaacatgaattcttccgctctgatagat
ttgaaagctgagctgtaccggaagcaggaagagttcaaacagttgaagaatacaacagga
acgcgaatcaaaggaagaacacaggaaaagacaacacctgacctgttcagtcggaagaac
aagggcgtgttggagcgggcacagcgggacctggaggagaaggtggaggaggaggatgtg
ctcgtcaggtcaagaagagctttagaagccaaggccaagttgtatgacaagatctcttcc
agttctgaaattcctgaggaagatggcagtggagtgttccttgttgatttccagaagaaa
gttattgacaatattgtggaggccagagacagagagtatagcaaggggagacaactccct
gcagacaaccaggatgaggaagagatgctttccgacactgttcctccaccatccgatcct
caggaggagtgggtggattacacagactctttgggcagatctcggcgctgtatgaagaaa
gacttgccacagttgatccaacaggacaaggacatggctaaagtcagaggggaggactca
agtcgacctcctccccctgaggatgaggacacaccgtccttgatgtccagcgacatgcat
cgtgagctgctgagacagaagtgggagaaggaagagcaggaggccctccagcagtcaaac
atacactacgctaatgtccagtttgatgagatccgaactcatggagttggattctaccag
tttgacaaggacactgacaaacgtcaggaacagatggacacactgaacaagctgagggat
cagacggtagatgagcgaggtcgtcgagagaggctcaaggagaagcggaaggccatgttg
gatgctcgacttgccaaagtcaaacagagacgcaggctgaaggagggggcgccactagcg
gaagagccagccactgaggaagagattggtcccaggctggaggagatgctctccggacag
agatgtaaaccagagaggacggaggtgaaacaggagaaccctgaggttgagcctctcaaa
cgagacgacagctggaagaaggacgcacccgagagagagtgggacaagggcaaggaaaaa
accctggcattcaaggaagagagatacttctcacagcgtcgggatgaacggctgaacgag
ttcgcgccaccttctgcgtactttgactctcctccagtcagacaaccaccaaagactaaa
tctgccttcgggaaaccctacaatatatccaacacagacttaaaacccaaaactgttgtg
ttaaccagagaaagtattcaagctaaacatcaacctcaaccagagattgttgatgtaagt
gcaatacctctaccaactaacatcagaaaaagtgattgtacatcggaggataacaaacaa
gatgctatgaagaccagcatgatttctaaggccccaggtgcacctcctggccttgcccca
cacgtagacttctctgtacctcccccggggttccagccacctccccagtggggcccctat
ccttcagttcccccaagctcgtcaatgtatcctggtcatgatggtttcctgtccgggtca
gtcatggcaggggtaggtcatcagttaccagacacctcagttccacccccgaacaccttt
atccaaccacctaactcctacgtcccacccctaaacagctcagtccaaccactgaacacc
tcggtccctcctccgaatacctgggtctcgccacctggtgtctcattaggacctccagag
tcgacaccagcagatgcgacagaggagcaagcagacgcttcaactccgtcttcataccct
atacctcacacccacagttcaggaacttctggagcagatgtgatggaaaaacctattttc
gtaccccggacagcggttctggatacccgtctagtccagaatgaggacagtgaggcccca
accgtgtgcggtggtgttcctgatgtcctggcccagccctaccagcccggcagcttcatg
gccgccctacaagcccagcatcaggccacggaggacctagctacagcatcacgcgagaag
gcacacttccgaggtggacctgtcatatataaacatgaaccagttgtgacggtcactgag
aaggctgtggtagaatcagagtctgtgtcatgtgaacagtcgactgaagatgtagtcgca
gccttcttgaaacagattaaggacaaagtgtga
DBGET
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