Haliotis rufescens (red abalone): 124112222
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Entry
124112222 CDS
T07893
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like isoform X1
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04137
Mitophagy - animal
hrf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124112222
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124112222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124112222
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
124112222
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124112222
Multi subunit type E3
ERAD complex
124112222
LMBR1L-GP78-UBAC2 complex
124112222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
G2BR
zf-RING_11
zf-rbx1
zf-ANAPC11
zf-RING_16
zf-RING_UBOX
zf-RING_5
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
124112222
NCBI-ProteinID:
XP_048254927
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MPAILLERIPLPSLQTYTAFSTVLLTCALFYTHQTVTSTPFESLEQEVDAPIKTEVPVTE
NLSEDDPEIMISDPWNTTLPYDSYEWNFLFVMTTQAWCVWTLVNTAYCCLILLGKLIQRM
VFGELRVSEQQHLKDKFWNFVFYKFIFIFGVMNVQTMEEVVLWVAWFSVLGFFHLLTQLC
KDRFEYLSFSPTTARYSHVKLLSLLWVILVSCGGLLLVCVYVGLQVGLTILAFMAAECLL
LGIRALYVVVRYIIHLWDMSKEGVWENRSMYVYYAELIFELAALSIDFCHHLHMLLWGNI
FLSMASLVICMQLRYLFYEFQRRVKRHKNYLRVVKNMEARFPMATQEDLEQNNDDCAICW
ERMESARKLPCCHLFHNSCLRSWLEQDTSCPTCRMPLSDGQRERQNVPQGGPAETGNAGA
PPAPPANAATTNHFFHFDASRYVSWLPSFSVEVTHTNLLTGQQQARVSPTSQLDNMARQV
QAVFPNMPLATIVDDLGATRSVNLTIDNILEGRLVAPPTPVLANRPSVDNDTDDEQNMQQ
IAVPSTVSRTGLMGLRAALGDTHLSVGDNTDSQPGPLLAQAEAMVLNSGDFRHSEDVPSP
LGGRFSKSASERMSMLEHRKTSMVDQARRKYLQKNKHNTESGDLSSSSQSDQSDDSRSQQ
REVIFQAAQRRLNSIHHSQYS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgccagccatcttactggagaggattcctctgcccagcctgcagacgtacacagctttc
agtacagttctgctgacatgtgccctcttctacacacatcagacagtcacctccactcca
ttcgaaagtctggaacaggaggttgatgctccgatcaagacagaggtcccagtaacggag
aacctaagtgaagatgaccccgagatcatgatatctgacccgtggaacaccacactaccc
tacgactcctacgagtggaatttcctgtttgtcatgacaactcaggcatggtgtgtttgg
acactggtaaatacagcctattgctgcctgatcctcctgggcaagctgatacagcgcatg
gtgtttggagagctccgagtcagtgaacaacagcacctgaaggacaagttctggaacttt
gtgttctacaagttcatcttcatctttggtgtgatgaatgttcagactatggaggaggtg
gtgctgtgggttgcctggttctccgtccttggcttcttccacctcctcacacagctctgc
aaggacaggtttgaatatttgtccttctccccgaccacagcccggtactcccacgtgaag
ctcctcagtctgctgtgggtgatcctggtgtcgtgtggaggcctgctgcttgtgtgtgtc
tatgtgggacttcaagtcggcctcactatactggccttcatggcagcggagtgtttactg
cttggaatcagggctctgtatgttgtcgtgaggtacatcatccacctgtgggacatgagc
aaggagggtgtgtgggagaaccgatccatgtacgtgtactatgccgagctcatctttgaa
ttggccgccctctccatcgacttctgtcatcacttacacatgctgctgtggggcaacatc
ttcctgagcatggcgagtctggtgatctgcatgcaactccgctacctgttctacgagttc
cagagacgggtcaagagacacaagaactacctgcgggtggtcaagaacatggaggccaga
ttccccatggcaacacaggaagacctggagcagaacaacgacgactgcgccatctgctgg
gagaggatggagtccgccaggaagctgccctgctgccacctgttccacaattcctgttta
cgatcatggctggagcaagacacatcttgtccaacttgtcgcatgccactgagtgacggt
caacgcgagagacagaacgtgccacaagggggacctgctgaaacagggaatgctggggcg
ccaccagcgccacctgccaacgcggcaaccactaaccacttctttcatttcgatgcatct
cgctatgtgagctggttgccgagcttctctgtggaggtgactcacactaacctgttgaca
ggacaacaacaagcacgggtgtcccccacctcccaactagataacatggccagacaggtg
caggcagtttttcctaacatgccgctggctaccattgtggatgatctgggagctactcgg
tctgtgaacctgacaatagacaacattctagagggaagacttgtagcgccaccaacacca
gtacttgccaacagacccagtgtagacaatgacacagatgatgaacagaatatgcagcag
atagcagtgccatctacagtgtctcggactgggctcatgggcttgagggctgcattgggt
gacacccacctgtcagtgggagataacactgacagtcagccaggccccctgttggctcag
gctgaggccatggtcctaaactcaggggactttagacacagtgaggatgttccttcaccc
cttggaggaaggttttcgaaatctgcatctgagagaatgtcaatgttagaacacagaaag
acatccatggttgatcaagccagaaggaaatatcttcagaagaacaaacataatacagaa
tctggtgatctttcatcatcgtctcaatctgatcagtcggatgactcaaggtcacaacag
cgcgaggtgatatttcaggcagcccagcgcagactgaactctatacaccactctcagtac
agctga
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