Haliotis rufescens (red abalone): 124113267
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Entry
124113267 CDS
T07893
Name
(RefSeq) exodeoxyribonuclease-like
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
124113267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124113267
Enzymes [BR:
hrf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
124113267
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
124113267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
124113267
NCBI-ProteinID:
XP_048239994
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
MPPKSKKKVAKEVPKEVADAAAAEGPPAKKGKKAEAEADEGEEATPKKGKGKKKAEENGD
GDKKKVVIPTMTLDEQDFSSSAKTKAGLDWNLKISSWNINGIRAWLGKEGTAYIEKEAPD
VFCVQETKCSLDKMPDTVNVDGYHAYWSSGETEGYAGTGMYCKEKPIEVTYGIGVDKHDK
EGRVITAEFEKFYLVTAYIPNAGRGLTRVDYRTKEWDVEFQAYMKKLDDKKPVILCGDLN
VAHLDIDLKNPKTNKKNAGFTPQEREGFTNLLNEGFVDSFRLLYPDLEGAYTFWAYFMNN
RAKDVGWRLDYFVMSERLTDNLCDSIIRKFVQGSDHCPVVLFLNM
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagtcaaagaaaaaggtcgccaaggaagtacctaaggaagtagctgacgct
gctgcggctgagggacctccagcaaagaaggggaagaaggcagaggctgaggcagatgag
ggtgaggaggccacgcccaagaagggcaaggggaagaagaaggccgaggagaacggagac
ggagacaagaaaaaggtcgtcattccgaccatgaccttggacgagcaggacttctcctcc
agcgccaagaccaaagctggacttgactggaacttgaagatatcctcctggaacatcaac
ggaatcagggcgtggcttgggaaagagggtactgcctacatcgagaaagaggccccagat
gtcttctgtgtccaagaaacaaagtgtagtttagataagatgcctgatacagtgaatgta
gatggttaccatgcctactggtcgtcgggggagaccgagggctatgctgggacaggcatg
tattgcaaggagaagcccattgaggtcacatatggaatcggtgtggacaaacacgacaag
gagggacgggtcatcacagccgaatttgagaagttctacctggtcacagcatacattccg
aacgctgggcgtggtttgacccgagttgactaccgcacgaaggagtgggatgtggagttc
caggcctacatgaagaaactggatgacaagaagcccgtcatactgtgtggagatctcaac
gtcgctcatcttgacatagacttaaaaaatcccaaaaccaacaagaaaaatgcaggtttt
actccccaggagcgtgaggggttcaccaacctgctgaacgagggctttgtggactcattc
cgcctactgtacccggacctggaaggtgcctacactttctgggcctacttcatgaacaac
agagccaaggatgtaggctggagactggactattttgtgatgtccgagcgtctgaccgac
aatctgtgtgacagcatcatcaggaagtttgtgcagggtagtgaccattgtcccgttgtc
ctgttcctcaacatgtga
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