Haliotis rufescens (red abalone): 124113418
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Entry
124113418 CDS
T07893
Name
(RefSeq) interferon-induced helicase C domain-containing protein 1-like
KO
K12647
interferon-induced helicase C domain-containing protein 1 [EC:
5.6.2.6
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
hrf04054
]
124113418
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124113418
Pattern recognition receptors [BR:
hrf04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
124113418
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
DEAD
ResIII
Helicase_C
RIG-I_C
AAA_22
AAA_19
Yippee-Mis18
Med16_C
AAA_11
Motif
Other DBs
NCBI-GeneID:
124113418
NCBI-ProteinID:
XP_046329712
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MQEESMHMPPSESLPEDYEDVEMSDEEAERDVTCQQDLDLRLYQLELAEHAVKRRNTIIC
APTGSGKTRVALYIVKDHLEKQDEAEANGKRKVVFLARTVPLITQQYKTFRKFHSKYRVV
KLSGEDENSTVLHLLLDHYDIFVMTPQILENQLRDAKIKSLSVFSLIVLDECHHTRKGEP
YNKLMIRYLKQKSKKKSIRLPQIVGLTASLGVEKATVDEEAIDSILKLCANMDAPYLSTV
QTHIEELREKVPVPDEKKVNLTENRQDPARKELEKAMEKIEDLMIDINDLNNRTIDKLLL
KLPSDRISQSYGQWAVKVKNEARLVQTGPDDGHGSDVDRRKAEMARGIFDMADQLFKYNA
ALEIHEYARIQDVVAYLQKEFSNVALEQIESSLNLAWEEQLGEISTNLKKNLMKFGRQCD
NPNLKVLAKTLTEMLDSKGSDSRAIIFVRTRAFCYALTNWLNEDDKIDPQLKDLKAMAFT
GAGANDEEGGMTQNEQDKVISKFKSGEVKLIVATSVAEEGLDIPECNMVVKYNHVGNEIT
TIQTGGRSRKAGGTSVLLGSSKTHQKEILNLARAAMMERAVKKILQMPIDQVIRRTGSLQ
EETLVKEKTKDLVQRRQNRQKLQTNFKLKCTRCKTFCAHSKDLRVINDNHHVVIDSEFEG
RIEVKPFQNQKNIDGIKLTGHMQCKTCHRAWGTKFLYQGISYPSLAIKNFIVVNEETSEI
KHCKKWLELPYTIRVWSLEDIKTCLRTGGDARSDEEDKDEGEEELDLE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaggagtccatgcacatgccgccgagtgagtctcttcccgaggactatgaagac
gttgagatgtctgatgaagaggctgagagagatgtgacttgtcagcaagaccttgatctc
cgcctataccagctggagttggctgagcatgcagtaaaacgccgtaacaccatcatctgt
gcccctaccggttcaggcaagactagagtggcactctacatcgtcaaagaccatcttgaa
aagcaggatgaagctgaagctaatggtaaaaggaaggtggtgttcctggcacggacagta
cctctaattacacaacagtacaaaaccttccggaaattccatagtaaatacagggttgtg
aagctgagtggtgaggacgagaacagcacggtcctccacctattgctggaccactacgac
atctttgtgatgacaccacagattctggagaaccaactgagggatgcaaagatcaagtcc
ctgtctgtgttcagccttattgtgctggatgagtgtcaccacacacggaaaggggagccc
tacaacaagctcatgatcagatatctcaagcagaaaagcaaaaagaaatccattcgccta
ccgcagattgtaggcctgacagcctccttgggagtagagaaggcaacggttgatgaggag
gccattgacagtatcctgaaactgtgtgccaacatggatgccccctatctctccacagta
cagacacacatagaggaactcagagaaaaggtcccagtgccagatgaaaaaaaagttaat
ttgactgaaaaccgacaggaccctgcacggaaagaattggagaaagcaatggagaagata
gaggacttaatgattgacataaatgatctgaataacagaacaattgacaagctgctactg
aagcttcccagtgaccgtatcagtcagtcatatggccagtgggcagttaaggtgaagaat
gaggccaggctggtccagacaggacccgatgatggccatggcagtgatgtggatcggagg
aaagctgagatggctagaggcatattcgatatggccgatcagctgtttaaatacaacgct
gctttggaaatccatgagtacgctcggatccaggatgtggtggcatatctgcagaaagag
ttcagtaacgtggcactcgagcaaatagaaagcagcctcaacctggcctgggaggagcaa
ctgggcgagatttccacaaatcttaaaaagaatttgatgaaatttggcagacaatgtgac
aaccccaatttgaaagtgttagctaaaacactgacagaaatgctggattcaaaaggcagc
gactcccgagccatcatatttgtgagaactagggccttctgctacgctctgaccaactgg
ctgaacgaagacgacaagattgatccccagctgaaggatctgaaagccatggcgttcact
ggtgcaggagcaaatgacgaggaaggaggtatgacacagaatgaacaagacaaagtgatt
tccaagttcaaaagtggtgaggtcaagttgattgtcgccacatcagtagcggaggaagga
ctggatatcccagaatgcaacatggtcgtgaagtacaaccatgtcggcaatgagatcaca
actatccagaccggagggagaagccggaaggcaggaggcacctctgttctgttgggcagc
agcaagacccaccagaaagaaatactcaatcttgctcgggctgccatgatggaaagagct
gtcaagaaaatcctacaaatgccaattgatcaagtcattcgcaggaccggcagtcttcag
gaagagaccctggtaaaagagaaaaccaaggatcttgtccagcgacgtcagaatcgacag
aaacttcaaacaaactttaaactgaagtgtactcgctgtaaaacattttgtgcccacagc
aaagatctgagggtcattaatgataaccatcatgtcgtcattgacagcgagtttgaaggg
cggattgaagtcaaaccattccaaaaccagaaaaatatcgatggaataaaactgacgggg
catatgcagtgtaagacatgccacagggcctgggggacgaagtttctataccaggggatc
tcgtacccctcactcgcgatcaagaacttcatcgttgtcaatgaggaaaccagtgagatc
aagcactgcaagaaatggttggagcttccttacaccatcagggtatggtccctagaggat
atcaagacatgtctcagaactggtggtgatgccagatcggatgaggaagacaaggatgag
ggagaggaagaacttgatctggagtga
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