Haliotis rufescens (red abalone): 124114190
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Entry
124114190 CDS
T07893
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124114190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124114190
03036 Chromosome and associated proteins [BR:
hrf03036
]
124114190
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124114190
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124114190
Chromatin remodeling factors
BAF complex
124114190
PBAF complex
124114190
GBAF(ncBAF) complex
124114190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
HSA
Bromodomain
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
124114190
NCBI-ProteinID:
XP_046330727
LinkDB
All DBs
Position
Unknown
AA seq
1745 aa
AA seq
DB search
MATGDDSNMMNTPPPGPSASYPQDNVQMLQKVTMAISQMEEKGMQGDPRYDQLMVMANRA
KNMPGGPGPHGMQGGPGGPGMAGTPPHGMTMGPQSQGMQGPMPGMHQGPQGMGGPPGMSG
GPMPGMGGPQPGMTASQQGMGGSQSGMGGPGGPQQGMGGGQNINGGSQQGMNGGPQQGMP
GGPQQGMPGPPGMQGPGGMPHGGMGGPGPNMPGNMASQNMGGPNDGPMGAPGMNMPPNMN
NPNVPTSSTSMSQPSSNMGGPSVPNTSGSGGAMNTTMAGPGMNSGPGPMGPVSGNMGMGP
NMPPHNMEGNQGQGKIQGSAPQGMPPGQMPPGGPRPTAFSSAQLHQLRAQIMAYKLLARN
QIIPDTLRLAVEGKRPLGPFPRPADPHQMQQMRMQHQQQQQQQQQQQQQQQSQQSSDPSQ
QPQQMQMRAMSSTAQPNGAPPPTSTPDSGASTPRPTQPSQPPPPSVQAMMALQQKQNRIA
PVAKPQGLDPIEMLSERENRLAARIGSRIQELSKMPATMPEDMRCKAMIELRALRLLNFQ
RQLRTDVVSCMRRDTTLETALNTKAYKRSKRQSLREARITEKLEKQQKVEQERKKRQKHQ
EYLNAVLQHAKDFKEFHRNVTAKISKLNKAVMTYHANTEREQKKEQERIEKERMRRLMAE
DEEGYRKLIDQKKDKRLAYLLHQTDEYIDNLMKLVHEHKEDIRKKKRHRIKKKKRPKTPK
EGQSGDALKEGGLDESSNMSEIHATVKETATGKLLTGEDAPTAGQLDAWLELHPGYEVVP
TEGGEDDENSDEEESDEESEADEPLPPPSILTENRPGTKATSPENLDEETANQIIQQAST
KDEDDEYKNLENYYGVAHTVREKVFEQASILVNGTLKEYQVKGLEWLVSLYNNHLNGILA
DEMGLGKTIQTIGLITYLMERKRVNGPFLIIVPLSTLSNWIIEFEKWAPSVIKIPYKGSP
LVRRNIAPQLKGGKFNVLLTTYEYIIKDKAILSKLRWRYMIIDEGHRMKNHHCKLTQVLN
THYIAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSCATFEQWFNAPFAMTGEKVELNQ
EETLLIIRRLHKVLRPFLLRRLKKEVESQLPEKVEYVIKCEMSALQRFLYRHMQHKGVLL
TDGSEKDKKGKGGAKLLMNTIMQLRKICNHPFMFHHIEEAFAETAGSQGGIVTGPDLYRS
SGKFELLDRMLPKLKLRNHRVLLFCQMTSLMSIMEDYFVYRGFRYLRLDGTTKSEDRGHL
LHLFNQQDSPYFVFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQKAE
VRVLRLMSVNSVEERILAAARYKLNVDEKVIQAGMFDQKSTGFERKQFLNEILMNEQNGE
EEEDEVPDDETINQMLARSEDEFEVYQKMDIERRRNEARDGGKRKPRLMEIDELPSWITK
DEEEVDRLTCEEEEDKLFGRGSRQRKEVDYSDQLTEKQWLRAIEDGNLDEVEDKKRVTKK
GRKRKPVDDDMEQTPKIKKRRGRPPVEKMTPNPPKLTKRMKKILDVVINYKDSDGRVLSS
MFMQLPSKKELPEYYEIIRKAVDFRKIKQRIVDHKYRSIDDLENDVMLLCKNAQAYNVEG
SVIYEDSIVLQSVFTSARERLEKEGMVSSDESGASEEEEDIDDKDDQDDDADDDDSQHVK
KHKLSKESKKTPSSSKQRGPKPRKAKAKPIISDDESEDSDSDDEEVMPSRSSTRTSSPSP
GHRKR
NT seq
5238 nt
NT seq
+upstream
nt +downstream
nt
atggcaactggggacgacagcaacatgatgaatacaccacccccagggcctagcgcttct
taccctcaagacaatgtgcagatgttacagaaggtaaccatggctatcagccagatggaa
gagaaaggaatgcaaggagacccaagatatgatcaactgatggtcatggctaacagagcc
aaaaacatgccaggcgggcctggaccacatggtatgcaagggggaccaggtgggcctgga
atggctggcacccctcctcatggaatgaccatgggaccacagtcacaaggaatgcaaggg
cctatgccaggaatgcaccaaggtccacagggaatgggaggaccaccagggatgtcaggt
ggtccaatgccaggaatgggtggcccacaaccaggaatgactgcttcccaacaagggatg
ggtggatctcaatctgggatgggtgggcctggtggcccacagcaaggaatgggtggaggg
cagaacataaatggaggatctcaacaaggcatgaatggtggcccacagcaaggtatgcca
ggaggtccccaacagggcatgcctggtcctccaggtatgcagggacctggaggcatgccc
cacggaggaatgggtggtcctggtcccaacatgccgggcaatatggcctcacagaacatg
ggaggacccaacgacgggccaatgggggcaccaggcatgaacatgcctcccaacatgaac
aatcccaacgtgccaacaagtagtacatcgatgtcacaaccatcatccaacatgggtggc
ccctcagtacccaatactagcggtagtggtggagctatgaacacaaccatggctggccct
ggtatgaactctggacctgggcctatgggacctgtttcagggaacatggggatgggacca
aacatgccaccgcacaacatggaggggaatcaagggcaaggtaagatccaaggaagtgcc
cctcaaggaatgccccctggtcagatgccccccggaggaccccgcccaactgccttcagc
tccgcacagctccatcaattgcgagcacagatcatggcctacaagttactagctcgcaac
cagatcatcccggacacactccggttagctgtggagggtaagaggccactgggaccattt
cctagaccagcagatcctcaccagatgcagcagatgaggatgcagcatcagcagcagcaa
caacaacaacagcagcaacagcagcagcagcagtcacaacagtcatctgatccatcacag
cagccacaacaaatgcagatgagggcaatgtcaagcactgcccagcctaatggagcacca
cccccaacatcaacacctgatagtggcgcttcaacacccagacccacccagcctagtcag
cccccaccaccttcagtgcaagccatgatggcccttcaacagaagcagaaccgtattgca
cctgtagctaaaccacaaggactggatcctattgagatgttgagtgagagagaaaacaga
cttgctgctcgtatcgggtctcggatccaggaactcagcaagatgcctgccaccatgcct
gaagacatgagatgcaaggccatgatagagctccgggctctcagactgctcaacttccaa
agacagctgagaactgatgttgtgtcatgcatgagacgcgacaccactctagaaacggct
ctcaacaccaaggcgtacaagcgcagcaagcgacagtcactgagagaagcccgtataact
gagaagcttgagaaacaacagaaggtggaacaggagaggaagaagaggcagaaacatcag
gaatatctgaatgctgtgctacaacatgccaaggacttcaaggagttccacaggaatgtg
acggccaagatcagcaagttgaacaaggctgtgatgacgtaccacgcaaacaccgagcgg
gagcagaagaaggagcaggagagaatagagaaagagcgtatgagacgtctcatggctgaa
gatgaagaaggttaccgtaagctgattgatcagaagaaagacaagcgcttggcctacctt
ctccaccagactgacgagtacatcgacaatctaatgaagttggtccacgaacacaaggaa
gatatccgcaagaagaagaggcacaggattaagaagaagaagaggcccaagacacccaag
gaagggcagagtggcgatgcccttaaggaagggggcctggacgagagctccaacatgagt
gagatacatgcaaccgtcaaggagacggctactgggaaactgttgaccggggaggatgct
cccactgctggtcaacttgacgcttggctagaactgcaccctggttatgaggtggtgccg
acagaagggggagaagatgatgaaaattcagatgaagaagagtcagatgaggagtctgaa
gctgacgagccactgccgccaccttcaatattgactgagaatagacctgggactaaagcc
acaagcccagaaaacctagatgaggagactgccaaccagattatacaacaagcatctact
aaggatgaggatgatgagtacaagaatcttgaaaactactatggtgttgctcacaccgtc
agagagaaggtgttcgaacaagcgtccatcttggtcaatggaacattgaaggagtaccag
gtgaagggtctagaatggctcgtctccctgtacaacaatcacctgaatggtatccttgct
gatgagatgggtctaggaaagaccattcagaccattggtcttatcacatacctcatggaa
agaaagagagttaacggaccattcctcatcattgtaccattgtcaactttgtccaactgg
atcatagagttcgagaagtgggccccctctgttatcaagatcccatacaagggatcacca
ctggtcaggagaaacattgccccacaattgaagggaggcaagtttaatgtgctcctaaca
acatatgagtacatcatcaaggacaaggccattctgtccaagttgcgctggaggtacatg
atcatcgatgaaggtcatcgtatgaagaaccaccactgtaagctgacccaggtcctgaac
acccactacatcgccccccacagactgctgctcacagggaccccactccagaacaaattg
ccagagttgtgggcccttctgaacttcctcttgccatccatcttcaaatcctgtgccaca
tttgagcagtggttcaacgctcctttcgccatgacaggagagaaggttgagttgaatcag
gaagagacactgctcatcatccgacgtctccacaaggtgcttcgacccttcctactgaga
cggctgaagaaggaggtggagtctcagctacctgagaaggttgagtatgtgatcaagtgt
gagatgtcggctctacagcgcttcctgtaccgacacatgcaacacaagggtgtcctgctc
acagatggatctgagaaggacaagaagggcaagggaggagccaagcttctgatgaacacc
atcatgcagctgagaaagatctgtaaccatccattcatgtttcatcacattgaggaggcc
tttgcagagacagcaggatcacagggcggaattgtcactggccctgatctgtacagatct
tctggaaagtttgagttgttggacagaatgttgccaaaactgaagttacgtaaccaccga
gtcttgctgttctgtcagatgacatctctgatgagcatcatggaggactattttgtatac
agaggtttccggtacctgcgtcttgatggaacaaccaagtctgaggatcgaggtcacctc
ctacacctgttcaaccaacaggactccccctacttcgtgttcctgctgagtaccagggct
ggaggtctcggtctcaaccttcaggctgccgacacagtcatcatcttcgactccgactgg
aaccctcatcaggacttgcaagcccaggatcgagctcatcgtatcggtcagaaggcagag
gtgcgtgtcctgcgtctcatgtcagtcaacagcgtggaggagcgcatcctagctgcagcc
cgctacaagctgaacgtggatgagaaggtcatccaggcgggcatgttcgaccagaagtcc
actggctttgaaaggaaacagttcctgaacgagattctcatgaatgaacaaaatggagaa
gaggaagaagatgaggttcctgatgatgagaccatcaaccagatgttggccagaagcgag
gatgagtttgaggtctatcagaaaatggacattgagcgacgtcgtaacgaggccagagat
ggagggaagaggaagccacgactgatggaaattgatgaactgccatcttggattaccaag
gatgaggaagaggttgaccgactgacgtgcgaggaggaggaagacaagctcttcggccgt
gggtctcgccagaggaaggaggttgactattcagatcagctcacagagaagcagtggctt
cgggctattgaagatgggaacctggatgaagtggaagacaagaagcgagtcaccaagaaa
ggtcgtaagaggaagccagtggatgatgatatggagcaaacgccaaaaattaagaagagg
cgaggtcgacctccagtagagaaaatgaccccaaacccaccaaaactgacaaagaggatg
aagaaaatacttgatgttgtgataaactacaaggacagtgatggccgagtattgagcagt
atgttcatgcagctgccatcaaagaaggagctccctgaatactacgaaattatcaggaaa
gctgtcgatttcagaaagattaagcaacgcatcgtcgaccacaagtaccgcagtatagat
gacttagagaatgatgtcatgttgttgtgtaaaaatgcccaggcttacaatgtggaggga
tcagtgatctatgaggactccatcgtgctacagtcagtatttacaagtgctagagagagg
ttggagaaggagggcatggtgtcctcggatgagagcggagcaagtgaggaggaggaggac
atcgatgacaaagacgaccaagacgatgacgctgatgatgatgacagtcagcatgtgaag
aaacataaactgtccaaagaaagcaaaaagactccatcaagtagcaagcaacgagggccc
aaaccgaggaaggcaaaggctaagcccatcatcagtgatgatgaatcggaagatagtgac
tctgatgatgaagaggtgatgccatcacgcagctcaacgcgaacatcgtccccgagtcca
ggacatcggaaacgatga
DBGET
integrated database retrieval system
