Haliotis rufescens (red abalone): 124114383
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Entry
124114383 CDS
T07893
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124114383
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
124114383
NCBI-ProteinID:
XP_048244937
LinkDB
All DBs
Position
Unknown
AA seq
1893 aa
AA seq
DB search
MAASPQGYMSDHRYIDRGKRETAFSIKWIVYCVVFFSVIICTNSVVPYRNCVSSTGQDLA
CFASSENVENINTTLTVTPLDVTCGQTTTDFYLRLGDVITPQNCTLGQHTKEKMIDTLTT
TWWQSKTWPISQYESTFPDHQYPINITLSFNKTYRMSANLTLTFNSGRPQVMAIYKSMDN
GATWVPLQYYARDCAKEYPNVPIAITANNMTTVICTADYSKDTGNPKPGGKVDFPGPGER
IKLKTEDTTQYYVELENIKGFFKFTDIRIQLFYPATDSKEASRNRFDFLRYYYGISDINI
RANCFCNLHAASCMSDLNGDSMCECQHNTAGKDCERCLPLYNNKQWREGSFLPSRNGTAH
ACEKCMCNDHADSCTFNSTLIKGVCDNCLHNTTGTMCEQCLDAFYPDVSLPLNDTKVCLP
CDCEALGVLDPANLKCQKDRAQPNIGQCTCKANVTGRRCNLCQPGFYGLLLPEPGTCKPC
GCNTKGTIGNSIVCDNSNGNCPCKTSIEGRVCDKCKAGYYQFPALSSDECKSCSCDPGGS
TNASCDSFGMCGCAPHVTGTKCEQAELYFYIPLLDEFILQPEGGTCTIDGDLWTPTKPFD
GSTFATCPPSGEKVVEFKYQGTNDQFDVTWPYNLGVRYSLGGVTARVGAQLELTATGNTQ
QIPAGSCGQALRTPTTLTLNLIPGQSTAAMASPAVTIDRRCQYTLKLTLPDHVNGTNSTL
IDSLIFLPSLNNSGQMFRITTERSSDAALYTDTCMGQLAALSSREAAITNETCRKVLYTV
SAEVYKEGKPCQCNPVGTLNSTCQNGQCTCAPLGGQCTCKPGVGGRRCDVCFPGYFGLSS
SGCTPCDCGPYGSVNGACNSTTGQCKCLQNIAVAGQMDANGNKTDRQCRACLADHYGYGP
SGCVECGCNATGTNNNETQCSAFGQCPCKPTISGMRCDACADSYYSFSASGCQKCDCDPN
GSTALTCDPVSGVCNCKSNVQDSKCNQCKPGFFNLAGYNPRGCQPCFCFNHSNVCAAADG
FTVYNITSATTTGWVVNGSNILAPEAYLGDKSSSYGQLIIADMFLTAGNVSQESLITVRG
AGAELVYRHSASTTAGRNVIETRLLPENWLLNNQNPSPHAMYNILSSITQLMFKNEINST
RTDVSTVTMVTAAASAGATAQLGASFVENCTCNAPDNVGGLSCEKCSAGNWRSASLPNDT
RFGMCIACDCTGRTFGERQCNETTGVCLNCRNGTTGDKCENCSVNVVGAQCDTCADRFWG
LGADGCRDCNCSTPGTTAASLCDKATGQCVCAAHVTGRQCDKCEDNYHNLTVSGCQECDQ
CYKLVMKEADKLRGLLTNMTDTLTNLTTNDDTQRLGNFVDRVDNASRSLSRLLNFLNDAN
AEEARTQTLIDQFNSTLVTLTSNLNTGNSSDLPLIQQRLQEATSTLSGASTKRDQAVANI
KSIHAASGPLKQIWTSLTSLVTSLKGVQTYLMSLSSDASSQVTNIMATVDEIERVARQSF
NRTLLDYTTAGNLNILHRNTTTDITRLDNIDSVLETVSTTALAEAIRIQAKSNTTLATAN
RLQSESIQFNNLDLKLQEQNLTFISFRNTLEATKAMAVTGKAGVDNKATAVAIAISNSEQ
QRMNTNNIIKQCDEINARVTAAERMAEDAKLNSEKLFKEAELMRDTMMNFETRALAVEQQ
ANTSLASARAVTAESQKVIEDAAALMTTMTSSQQTSSLALNTARQAKTVAQSQNTAITSV
AATANQLGVMSDLGMYQNKSLLPSTINTTILMPAKSKCDSTTTDVASATTVINNATTSAT
NVNADVARTQAEASRVLGVIMNIPGLNIATIESLKTQVDRLKGQFNRESLTATITGLKTA
HEAQTAWLEGIKAKKADLERQVNDMKLLERQIS
NT seq
5682 nt
NT seq
+upstream
nt +downstream
nt
atggcagcatccccgcaaggctacatgtctgatcaccgttacatcgacagggggaagagg
gagacggccttctccatcaagtggattgtgtattgtgttgtgtttttctctgtgataata
tgtaccaattctgtagttccataccgtaactgtgtgtcaagcacgggtcaagacttggca
tgttttgcctcgtcggagaacgttgaaaacattaacacgacgttgacggtaacgccgctc
gacgtcacctgtgggcagacaacaaccgacttctaccttcgacttggagatgtgatcacc
ccgcaaaactgcacactaggtcaacacacgaaggagaagatgattgacaccctaactact
acatggtggcagtcaaaaacgtggccaatcagccagtacgaatctacgttccctgaccac
caataccctatcaacatcacgttgtccttcaacaagacgtacagaatgtcggccaatttg
acgttgaccttcaactctggacgtccccaggtgatggccatttacaagtctatggacaat
ggtgccacttgggttccgctccagtactatgccagagactgcgccaaggagtaccccaac
gtgcccatcgccatcacggctaacaacatgacgacggtgatctgtacagcggactacagc
aaggacacagggaacccgaagccaggcgggaaggtcgactttcctggtccgggagagagg
attaagctgaagacagaagacaccacacagtattacgttgagctggagaatattaaggga
ttcttcaaattcacagatattcgtatacaattgttttacccggctacagattccaaggaa
gccagtagaaacagatttgacttccttcgctactactatggaatctcggacattaacatt
agagccaattgtttctgcaacttgcacgccgcctcctgcatgtccgacctgaacggcgac
tccatgtgcgagtgtcagcacaacaccgcggggaaggactgtgagcgatgtttgcccctc
tacaacaacaaacaatggcgggagggcagcttcctgccgtcccgaaacggcactgcgcat
gcgtgtgaaaaatgtatgtgtaacgaccacgccgacagctgcaccttcaactccacgttg
atcaaaggcgtgtgcgacaactgcctccacaacaccacggggacgatgtgtgaacagtgt
ctagacgccttctaccctgacgtgtcactacccctgaatgacaccaaggtctgcctgccg
tgtgactgtgaggccctcggtgtcctggaccctgctaacctcaagtgtcagaaggacaga
gcacagcccaacatcggccagtgcacgtgcaaggccaacgtgaccggccggcggtgtaac
ctgtgccagcccgggttttacggcctgctgctgccagagccgggcacctgtaaaccctgt
ggatgcaacactaaggggacaattggcaacagcatcgtctgtgacaacagtaacggcaac
tgtccctgcaagacgtccatcgagggccgagtctgtgacaaatgtaaagcgggttactac
cagtttccagccctgtcctctgacgaatgtaaaagttgttcttgcgaccccggtgggtcg
acgaacgcgtcgtgtgattcttttggaatgtgtgggtgcgccccccacgtcaccggcacc
aagtgtgagcaggcggaactctacttctatattccactactggacgagttcattctccaa
ccagagggtgggacgtgcaccattgatggagatctctggactccgacaaaaccgtttgat
ggttcgaccttcgccacctgcccgccaagcggggaaaaggtcgtggaatttaaatatcaa
ggcaccaatgaccagttcgatgtcacatggccatacaatctgggcgttcggtattctctg
ggaggcgtgacggcaagggttggtgctcaactggagctcactgcgaccggaaatacacaa
cagataccggcagggtcatgtggacaagcattgagaactcccactaccttaacgttaaat
ctcatacctggtcaatccactgctgcgatggcaagcccagccgtgaccatagacaggaga
tgtcaatacacattaaagctgaccctcccagaccacgtgaacggcaccaactccaccctc
atcgactccctcatattcctcccttccctcaataacagcggacagatgttcagaattaca
acagaaaggagctccgatgctgccctgtacacagacacatgcatgggtcagttggcagcg
ctgtcgtcacgcgaggccgccattacaaacgaaacgtgccggaaggtgctgtacacggtg
tccgcggaggtgtacaaggaggggaaaccttgtcaatgcaatcctgttggaacccttaat
agcacttgtcaaaatggccaatgcacgtgcgctcctcttggtggtcagtgcacgtgcaag
cccggggtaggagggcgccgctgtgacgtctgttttcccggctacttcggtctgtcgtcg
agtggatgtacaccctgtgattgcggcccctatggatctgtcaatggcgcttgtaacagc
accaccggccaatgcaagtgtctccagaatatcgctgttgccgggcagatggatgcaaac
gggaacaagacagacagacagtgccgcgcatgtctggctgatcactatggttacggaccg
agtggctgcgtagaatgcgggtgcaatgccactggaacaaataataatgagacgcagtgt
agcgcgtttggacagtgcccgtgtaagccaaccattagtggaatgagatgtgacgcctgc
gcagactcctactacagcttcagcgctagtggctgtcagaaatgtgactgtgaccctaat
ggcagcacggccttgacctgtgaccctgtgtccggggtgtgcaactgtaagtccaacgtc
caggatagcaagtgcaatcaatgtaaaccaggattctttaacctggcggggtacaatcct
agaggatgtcagccttgcttttgcttcaaccatagcaacgtctgtgcagcggctgacggc
tttaccgtgtacaacatcacatcggcgacaactactggatgggtcgtcaacggaagtaac
attctcgcaccggaagcttaccttggagacaaaagctcctcttatggccaactcatcatt
gctgatatgttcctaacggcggggaatgtctcacaggagtcgctcattactgtgcgagga
gctggggcggaactggtttacaggcactcggcgtcgactacagcagggaggaacgtaatc
gaaacacgactgttacccgagaactggctcctcaacaaccagaatccttcgccacacgcc
atgtacaatatcctctcatctataacacaactgatgttcaaaaatgaaataaactcaact
cggacagacgtgtcaactgtaaccatggtaacggcagcagcatccgctggcgccacggcg
caacttggcgccagttttgtagaaaattgtacttgtaatgctccggacaacgttggaggt
ctgtcttgtgagaagtgcagtgcaggtaattggcgatctgcctccttgccaaatgatact
cgtttcggcatgtgcattgcgtgtgactgcaccgggcggactttcggtgaaaggcaatgc
aacgagacgacgggggtttgtcttaactgccgtaacgggacaacaggtgacaagtgtgag
aactgctctgttaatgttgtgggagctcagtgtgatacctgcgccgataggttctggggt
ctcggcgctgatggatgtagagactgcaactgttccacacccggaaccacggcagcctca
ttatgtgacaaggcgaccgggcagtgtgtgtgtgctgctcatgtgaccggaaggcagtgt
gacaagtgtgaagataactaccataacctcacagtgtcgggttgtcaagagtgtgaccag
tgctacaagctggtgatgaaggaggcggacaaactgcgtggactgctgaccaacatgaca
gacacactgaccaatctcaccacaaacgatgatacccagagacttggcaactttgttgat
cgggtggacaacgcttcgagatccctttccagacttcttaacttcttgaatgacgccaac
gcagaggaggccagaactcagaccttgatcgaccagtttaacagcacactggtgaccttg
acctctaacctcaacactggcaacagctcagaccttccgctgatacagcagcgccttcaa
gaagcgacttcgaccttgagtggcgccagcacgaagcgggaccaggcagttgccaacatc
aagagcatccatgcggcgtcaggaccactgaaacaaatatggacgtccttgacctcgctt
gtgacgtcgttgaaaggggtgcaaacttacctgatgtccctgtcgtcggacgcctcctca
caagtcaccaacatcatggccaccgttgatgagatagaacgcgtagctaggcagtcgttc
aacaggaccctgcttgactacacgaccgctggcaatctgaatatattgcatcggaacacc
acaaccgacatcaccaggctcgacaacatcgactcagtccttgaaactgtgtcaacgacg
gccctggctgaagcaataaggattcaagcaaagagcaacaccacgctagctacagctaac
cgcctacagagcgaaagcatacaattcaacaaccttgatctgaaactacaagaacaaaat
ttgactttcatctctttcaggaatactttagaggccaccaaggcaatggctgtgacaggt
aaagctggtgtggacaataaggcgacggcagtagcaatagccatcagcaactcggagcag
cagcgaatgaacaccaacaacattatcaagcagtgcgacgaaatcaacgcccgggtgacg
gcggcggagagaatggccgaggacgccaagctcaactcagagaagctgttcaaagaggca
gagttgatgagggacactatgatgaacttcgaaaccagggcacttgcggtcgagcagcag
gcaaacacgtctctcgccagtgcgagggcggtgacggcggagagtcaaaaggttatcgaa
gacgctgctgctctgatgacgacgatgacttcatcgcagcagacatcgtcactggctctt
aatacagcaagacaggcgaaaaccgtcgcccagagccagaatactgccatcaccagtgta
gcggccacagccaatcaactgggagtcatgtccgacctggggatgtaccagaacaagtct
cttcttccaagcaccatcaacacaaccattctcatgccagctaaaagcaagtgtgattcc
actacaaccgacgttgctagcgccaccactgtcatcaacaacgccaccaccagtgcaaca
aacgtcaacgccgatgtcgctcgaacccaagccgaggccagcagagtacttggcgtcatc
atgaacatcccgggactcaacatcgcgaccatcgagtctctgaagacgcaagttgatcgg
ttgaagggtcagtttaacagggaatcgctcactgcaacgatcactggacttaaaactgcc
catgaggcccagacagcctggcttgagggaataaaagcgaaaaaggcagatcttgagaga
caggtcaatgacatgaaattattggagagacagatttcgtaa
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