Haliotis rufescens (red abalone): 124114386
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Entry
124114386 CDS
T07893
Name
(RefSeq) laminin subunit gamma-1-like
KO
K05635
laminin, gamma 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04512
ECM-receptor interaction
hrf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124114386
04518 Integrin signaling
124114386
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
JAG1-like_EGF2
Alanine_zipper
COG4_N
DUF1455
Motif
Other DBs
NCBI-GeneID:
124114386
NCBI-ProteinID:
XP_048244870
LinkDB
All DBs
Position
Unknown
AA seq
1642 aa
AA seq
DB search
MAAYSAAGLRQTTLKSCSNGNTRGKMVSFVLVICLGLLMRTCEAQEDPPRGRSSCYDRQG
RAQRCMPEFVNAAFGLPVDASNTCGVSSTNEYCLQTGVTGATKSCYYCDARRPGYNHPPE
FMTDFNNNYNWTWWQSETMLEDIQYPKFVNLTLSLKKTYDITYVRIRFHSPRPESFAIYK
RKSDTDEWTPFQFYSASCERTYGLPRRGVIQINNEAKAICTDEFSDISPLTGGSVAFSTL
EGRPSAFEYEDSPVLQDWVTASAIKIVLTRMNTFGDEVFGDPQVLKSYFYAISDLAVGAR
CKCNGHGSECKEVTSQGLEDELICTCEHNTQGPDCGECLPFYNDIPWARATESDAHECLP
CDCNNLSNRCHFDQELYLRTGHGGHCDDCRDNTDGAHCERCLVNHYRKLPENRCIDCQCN
PTGSESLQCNEQGQCRCKPGVAGDKCDRCEANFFDFDAYGCRPCSCNSAGSYNNEPRCDT
RTGECTCKENVEGRTCDSCKPGFFGLSEAHPFGCVPCFCYGHSSICQSAPGYYARNISTD
FETGKQRWTAVDRRNQEVETNYNGFTKNLGVSAPGTDSMYFQAPVRYLGDQRFSYNRFLT
FNLRIGDATGARPSIIDVVLEGAGQKVSGPIFAAGNQMPGLVGKNYRFRLHEHPDYQWTP
RLKASDFIAILSNLTAIKIRGTYTAEGVGFIDDIKLETARRGFNAGDEASWVEQCTCPEG
YVGQFCESCAPGYKRDPMNGGPFAMCVPCECNGHSSNCDVNTGRCICQDNTEGDYCDRCV
SGYYGNARAGTSADCQPCPCPGGGACVELPTDVVCTECPEGFGGNRCDLCLDGYFGDPAG
KYGDRRTCQKCFCNDNIDPNAVGNCNSTTGECLKCIYNSAGYYCERCLPTYYGDAIAEPK
GQCQPCGCYSNGTNQVGLLTCDDSGQCPCLRNVRGQRCDMCDDGYWNLDSGTGCEACDCD
QVGSLNFTCQLGSGQCQCKPGVTGRRCDTCQRFFYGFSRAGCQACNCDPVGSLDLQCDEY
GNCPCRNNVGGRRCDRCMENKFNISAGCIDCPPCYDLVQEHVNIHRAKLRELTNLINNIG
NNPSLFNDTEFISVMGDVNKTVNILLDEARGASTGDGSVGRQLQELRKSLNEVIHKTGQI
GRSITSAKDVSMETDRDIRQAEQAIERAEISLKAAEDYIDREGRLALDRALQALGRFGRQ
SEQMTEIANRAKIESERQLADAARIVAVANDAQNTSREALRLAQMALSMPGQTATDIQRL
NSEYNNADRLYEKTRQLAEKASELAEKAQDEALGLFTESQQSVPSVDVEKLLTDAANIKI
QATLIKEEAERLLEQNADLMADVNDGKMKAEDKLEEGIHLQQRTDELLAEVDGARAKARD
AVEMGEKTLKEANETYRTLAGFEDQVKGNKDKADEALKKVPQIEATIDQAERTTQEARNA
LSGASDDANKALQLAKQAQDTALDASDEASRIRNEAGTTKTKASALRNKADSLAENVNDA
ESVFNDLDARSTSDMDLAKTALEKANEAKDTAQKASSKVEDALKTVNDILQILDSFEMVD
PKSLDALEADLVDVERQLKEADIDAQYKYISSANDNVKNLVRKYTEDYSQLKADVDNIED
IKNSLRDGCFKSIEIESPAGGR
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtacagtgcagccgggttgcgacagacaactttgaaaagttgttcgaatgga
aatacacgagggaagatggtttcctttgttttagtcatctgtctgggacttttgatgagg
acttgcgaggcccaagaggaccctccaagaggcagaagcagttgttatgatcgccagggt
cgggctcagcgctgtatgcctgagtttgtgaacgcagctttcggtctgccggtggacgcc
agtaatacgtgcggagtttcttccaccaacgaatattgtctgcaaactggagtgacggga
gctaccaagtcttgctattattgtgacgccagacgacccgggtataaccatccacccgag
tttatgacagatttcaacaataactacaactggacgtggtggcagtcagagacgatgcta
gaggatattcagtaccctaaatttgtcaacctcactctcagcctcaaaaagacatacgac
attacctatgtgaggatacgcttccattccccaaggccggagagtttcgccatatacaag
aggaaaagtgataccgatgaatggaccccattccaattttatagcgcttcatgtgagagg
acatacggattacctcgacgaggagttattcagataaacaatgaagccaaggcaatctgt
actgatgaattcagtgatatatctcccctcactgggggcagtgtggccttcagtactctg
gaagggaggcccagtgcttttgaatatgaagacagtccagttttacaggactgggtgacg
gcatcagccatcaagatagttctgacccgtatgaacacttttggagatgaagtgtttgga
gaccctcaagttttaaagtcctatttctatgccatatctgatttagctgtcggtgccagg
tgtaagtgtaacggccacggcagcgagtgcaaggaggtgaccagccagggtctggaggat
gagctcatctgtacgtgcgagcacaacacacagggaccagactgtggggagtgcctgccc
ttctacaatgacatcccatgggccagagctactgaatcagatgcacacgaatgtctaccc
tgtgactgcaacaacctgtccaacagatgccactttgaccaggagctgtacctacgtaca
ggccacggtgggcactgtgatgactgccgcgacaacactgacggcgctcactgtgaacga
tgtctggtcaaccactaccgcaaattacctgagaataggtgcatagactgtcagtgtaac
cccacagggtccgagtccctacagtgtaatgagcaaggccagtgcaggtgtaaaccggga
gtagcaggcgacaagtgtgatcgatgtgaggccaacttcttcgacttcgacgcgtatggc
tgcagaccatgttcctgtaactcagctggcagctacaacaacgaacctcgttgtgacact
cgcactggagaatgtacctgtaaggagaacgtggagggacgcacctgcgacagctgcaaa
ccagggttctttggtttaagtgaggcacatccgttcggctgtgttccctgtttctgttac
ggccattcctccatctgccagtcagcaccaggatactatgccaggaacatctccactgac
tttgaaactggcaaacagcgttggacagcagttgaccgtcgcaaccaggaagtggaaact
aactataacgggttcaccaagaaccttggtgtgtcggctccaggaactgactccatgtat
ttccaggctccagttcggtatttgggagaccagcgtttcagctacaataggttcttgaca
ttcaacttgagaatcggggatgcgactggagcacgaccttccatcatcgacgtcgtgctg
gagggcgcggggcagaaggtctcaggtccaatctttgcagcagggaatcagatgccgggt
ctggtaggcaagaattaccgattccgtctccacgaacacccggactaccagtggactcca
aggctgaaggcgtcggatttcattgccatactgtccaaccttacagccatcaagatcagg
ggcacatacactgctgagggtgttggatttatcgacgacatcaagttggaaactgctcgc
cgtgggttcaatgctggagacgaggcgtcgtgggtggagcagtgcacgtgccccgaaggc
tatgtgggtcagttctgtgagtcttgtgcccccggctacaagcgagatcctatgaatggt
ggaccctttgcaatgtgcgtgccctgtgaatgtaatggccactcctccaactgtgacgtc
aacacagggaggtgtatctgtcaagacaacacggagggagactactgtgatcgatgtgtg
tctggttactatggcaatgcacgtgcaggaacgtctgccgactgtcagccatgtccttgt
cccggaggaggggcctgtgtggagctgccaactgacgtcgtctgtacagagtgcccggaa
ggatttggaggaaaccgatgtgatctctgtctggatggttactttggggacccggccgga
aaatatggggacagaagaacctgccagaaatgcttctgtaatgacaacatagatccaaat
gcagttggaaactgtaactccacaacaggagagtgcctgaagtgcatctataattcagcc
ggctactactgtgagaggtgcctgcccacttactatggtgatgccattgctgaaccaaag
ggacaatgtcaaccatgtggctgctactctaatggcaccaaccaggtgggcctgctgacc
tgtgacgacagcggccagtgtccctgcctccgcaacgtccgcggtcagcgctgtgacatg
tgtgatgatggctactggaacctcgacagtggcacaggttgtgaagcctgtgactgtgac
caggtgggctctctcaacttcacctgtcaactcggctcaggacagtgccagtgtaagccg
ggggtcacaggtcgtcgctgtgacacgtgccagcgattcttctacggcttctcacgggca
ggatgtcaagcttgcaactgtgatccagttggttccctggacttgcagtgtgatgagtac
ggcaactgcccctgtcgtaacaacgtcggtggacgtcgatgtgaccggtgcatggagaac
aagttcaacatctccgctggatgtatagattgtccaccatgctatgacctggtgcaggaa
catgtcaacatccaccgtgccaagctgcgagaactcaccaacctcattaacaacatcggc
aacaaccccagcctcttcaatgacacagagttcatcagcgtcatgggagacgtcaacaag
actgtcaacattctccttgatgaggcacgaggagcatcaactggtgatgggtcagtgggg
agacaactccaggagctccgcaagtctctcaatgaagtcatccacaagactgggcagatc
ggtaggagtatcacttcagccaaggatgtctccatggagacagaccgtgacataaggcag
gctgaacaggctattgaacgcgcagagatatcgctgaaggctgcagaggactacattgac
agagaaggacggctagcattagacagggcactccaggcacttgggcgctttgggaggcag
tcagaacagatgacagaaattgccaacagagccaagatagagtctgagagacaattggct
gatgctgctcgtattgttgctgttgctaatgatgcccaaaacacatcccgcgaggccctg
cgacttgcccagatggccttaagtatgccgggacagacagcgacggacatacagaggctg
aactcagagtacaacaatgccgaccgcctgtatgagaagacgcggcagctggcggagaag
gcctcggagctggcagagaaagctcaagatgaagcactgggtctgttcaccgaatcccag
cagagtgtgcccagtgtggatgtggagaagcttctcacagatgctgctaacattaagatt
caggccactctgataaaagaggaagctgagcgactgctagagcaaaacgcagatctgatg
gcagatgtgaatgatggaaagatgaaggctgaagacaagctggaggaaggcatccatctg
cagcagagaactgatgagctgctagctgaggttgatggtgctcgtgccaaggctcgtgat
gctgttgagatgggggagaagacgctgaaggaggccaatgagacgtaccggactctggca
ggttttgaggatcaggtgaagggcaataaggacaaggctgatgaggctctgaagaaagtt
ccccagatcgaggccaccattgaccaggcagaaagaacaacccaggaggcaaggaatgcc
ctcagcggtgccagtgatgatgccaacaaagctcttcagcttgccaaacaagctcaggac
acagccctggatgcttctgatgaagccagtcgtatccgtaacgaggctggcacaacaaag
accaaggccagcgcattgaggaataaagctgactctctcgcagagaatgtcaatgatgca
gaatctgtgttcaatgatttggatgctagaagtacatcagacatggacctggcgaaaaca
gccctggagaaggctaatgaggccaaggatactgcacagaaagcttcatcaaaggtggag
gatgccctcaagactgtcaacgacatccttcagatattagattcttttgaaatggtggac
cctaagagcctggatgcccttgaggctgaccttgtagacgtagaacggcagctgaaggaa
gcagatatagatgctcagtacaaatatatatccagtgccaatgacaatgtgaaaaacctt
gtgcgcaagtacacagaagactattcccagctgaaggcagacgttgacaatatagaggac
attaagaactcactgcgtgatggctgctttaagagtatagagattgagtccccagcggga
ggcagataa
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