KEGG   Haliotis rufescens (red abalone): 124114702
Entry
124114702         CDS       T07893                                 
Name
(RefSeq) polyribonucleotide 5'-hydroxyl-kinase Clp1-like isoform X1
  KO
K14399  polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78]
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    124114702
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hrf03019]
    124114702
Enzymes [BR:hrf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     124114702
Messenger RNA biogenesis [BR:hrf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     124114702
SSDB
Motif
Pfam: CLP1_P CLP1_N Clp1 CbiA MMR_HSR1 TniB AAA_16 nSTAND3 AAA AAA_18 ATP_bind_1 ABC_tran AAA_29
Other DBs
NCBI-GeneID: 124114702
NCBI-ProteinID: XP_046331355
LinkDB
Position
Unknown
AA seq 422 aa
MADDKEERKEEYKLEKFSELRFEVESKASVNLELCDGMAEVFGTELTKNKRYVFQAGSKV
AVFTWHGCTIKLSGKTEVAYVSKETPMVMYVNTHAALEQMREKADTENSRGPRVLVVGPT
DVGKSTLCRLLCNYAVRLGRAPVLADLDVGQNQIGIPGTIGAIVVERPADVEEGFSEAAP
LCFHFGHKSPSENLTLFNLLVSRLADVINLRCESSNKANMSGVIINTGGWIRGGGYEAIK
QAAGAFEVDAVIVLDQERLYNEMKRDMPEFVKIILLPKSGGVVERSTHVRAEGRDAKVRE
YFYGIKNTLYPHTFEVKFADVKIFKIGAPPLPESCLPLGMKAQDNKTKLVPLLPSNNILH
HVLSINSSTTIEQTMIESNTLGFIVVTSVNMEKMTFNVLSPGAPPLPNTNLFVMDIQFMD
IK
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctgacgataaagaagagagaaaggaagaatacaaacttgagaagttttctgaatta
agatttgaagtggaatctaaagcaagtgtgaacttagagttatgcgatggaatggctgag
gtgtttggcacggaattaaccaaaaataagcgctatgtgtttcaagccggctccaaagtg
gccgtgttcacatggcatggttgtaccatcaaactcagcggcaagacggaagttgcctat
gtttccaaggagaccccgatggtgatgtacgtaaatacacatgcagcgctggaacagatg
agggagaaagcagataccgagaactcccgcggaccaagggtgcttgttgttgggccaact
gatgtcggaaagagcacgctgtgccgcctcctctgcaactacgctgtgcggctcgggcgt
gctccagtcctggcggatctagacgttggtcagaatcagataggaatcccaggaacaata
ggggctatcgtcgtggagcggcctgctgatgtggaggagggcttctcggaggcagcacca
ctctgtttccacttcggacacaagtcccctagcgagaatctcacactcttcaatctcctc
gtgtcgcgactggccgatgtcatcaatctgcgatgtgaatccagcaacaaagccaatatg
agcggggttatcatcaacacggggggttggatacgaggagggggatacgaggccattaaa
caagctgcaggagcctttgaagttgatgctgtgattgtcttggaccaagagcggctgtat
aatgagatgaaacgagacatgccggaattcgtcaagatcatcctgctgccaaagtcagga
ggggtagtggagcggtcaacacacgtgcgtgccgagggcagggacgccaaggtgcgggaa
tacttctacggcatcaagaacaccctgtaccctcacacgttcgaagtcaagtttgcagat
gtcaaaatatttaagattggagccccacccctgcccgaatcgtgcctgcccctggggatg
aaagcccaggacaacaagaccaagctggtacccctgctgcccagtaacaacatcctgcac
catgtcctgagcatcaactcctccaccaccatcgaacagaccatgattgagtcgaacacg
ctgggatttattgttgtgacgtcggtgaacatggagaaaatgacgttcaatgtgctgtcc
ccaggtgctccaccactgcccaacaccaacctgtttgtcatggacattcagtttatggac
atcaagtga

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