Haliotis rufescens (red abalone): 124115019
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Entry
124115019 CDS
T07893
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B-like
KO
K11267
sister chromatid cohesion protein PDS5
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrf03036
]
124115019
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124115019
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
124115019
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
124115019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
INTS7_N
Motif
Other DBs
NCBI-GeneID:
124115019
NCBI-ProteinID:
XP_046331761
LinkDB
All DBs
Position
Unknown
AA seq
1482 aa
AA seq
DB search
MAKALNKTVKVCYPPGCKEVSEEIPKDELIRRLKLLARAFQDMGQDDNDQYAGLALMLAT
DFYLDHQNKDVRLLVACCIADVFRIFAPEAPYKDQDHLKEIFLFLIKQLRGLEDPEAPSF
KRYFYLLENLAWVKSFNICIELDDNQEIFCSLFKLMFSTVSDKHSSKVKNFMLDMMTPLI
AEADTVSQELLDVVLINIVEPQKSQNKHAYALAKDLLRRTSNAIEPYIQAFFNNTLMLGK
TSESEVSDHLYDLIYELNQVSPNVLLAVLPQLEFKLKSNEEHERKHVTKLLAKMFSEPGS
DLANQNKPLWYCFLGRFNDISTSVRIICCSFAQYFVLNHPELTKDILEQLKVRQHDPEET
VRIEVINCVMNVAKKDFDFVNEEMMTFIKERTLDKKFKIRREGLLGLGTMYKQVMTKETI
NPQHEKKVAWIKNKVFHAYYQNSNDDRLLVERIFNINLVPYMLPADVRMLRLLRLYCTLD
DHAVKAFNELLKHRSSVRVQVMQLLEAIELHGQPNAPPLFPRLAGLVRTLPEQQKPQEYL
KKFSQKLRDDKRMRHLLKVVVHPECSCKKAEEAVKEILKKIGCNPGQANYMYNLVKSLLE
RIAPVMIDAVAMEKLVNHVNETLTGLGENMEGIHNAGEKSVKLLLALSYAYPHHFRTAEV
FEKFLTFLNHDDDTVSDITQQIITNTGSNLQRMHPDIYSSLVPVLVRTAKMGNPKQTKHA
IRCISVVCKNKEPILAQVFEYVKRNLDPESANYITSIVALGHIAKLCPEEFATDMKSIVS
RIIVKDLLMQDRTDSVEATESWYSDHLVSEETQAKVQAMKLLVRWLQGLKSNQNNSGTST
LRLLYTVIIHEGDLMEHGRINKPELARLRLQAGCCMLKLAEETCYSDIIPCEQFQALALL
INDSCYHVRVKFAIKLHKGLLNMRLPLEFMSIFSLAANDPLKERQRQLKQFLNVNIQKRR
DYLKQNPAARNRMFAILPDYILPYTVHLLAHDPDFKTFQQTDALKNIKDCLWFVMDPLTG
RSEDYNYAFFRRMIENMKQTKDAQCPDDDDMNKKLYAVCDVALGLMNTKTTNITLKDNNT
EPVLPAKLFTKPDKSYTNTKSYLPKDFNFDGPRRKGVQALIDGPPRSGYGSKPDPTTTEI
IVESPGPVVNPHPKVPRTKRGPLRKKKEEEPGKENDGDSNESDSLEKNCGDSDKSSSPEV
AKKSTRSSSQDKNSDESQSSSEHTSRGGRGVKAGTKQTRLEDFKVKLSPAKRGKDSVKKS
LVNGTNKRTAKAGEGDGSESAKHSRKRHGSSEEDVPSKRTRGATSEDVESQRNTRAADTK
KSKGTKDKNGGGKSYNCDVSETDSVSKEGSVSTPGASPRKRRASSPSPQPSAQVKRSRLT
RSNIKTTDSDQEIVPSPTPSAEPQKTLQTKKQETLVKKTNVRNVRRAKAMSNGTSDGEDT
AETDSPSSPPRRVAALTRAVQSVGAGEDAEGGVRRKTRSRKK
NT seq
4449 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagcgctgaacaaaactgtgaaggtgtgttacccacctggctgcaaggaagtc
agtgaggaaatacccaaggatgaacttatcagaagactcaagttactggcccgagccttc
caggacatgggtcaggacgacaatgaccagtatgctggacttgccctcatgctggccaca
gatttctacctggaccaccagaacaaagacgtccgacttctggtggcatgctgcattgca
gacgtcttcagaatatttgccccagaagcaccatacaaagatcaagatcatttgaaggag
atcttcctgttcctgatcaagcagctgcgagggttggaggatcctgaggctccttctttc
aagagatatttctatttattggaaaacctggcctgggtgaagtccttcaacatatgcatt
gagctagacgacaaccaggagatattctgctccctcttcaaactcatgttctccacagtc
agtgacaagcattccagcaaggtgaagaactttatgttggacatgatgacacccctaata
gctgaggctgacacagtgtcacaagaactgttggatgttgtactaatcaacatagtagag
ccgcagaagtcgcagaacaaacatgcctatgccttggcgaaggacctgttgaggagaacc
agcaacgccattgaaccatacattcaggcatttttcaacaacacactgatgctggggaag
acctcggagagtgaggtgtcagaccacctgtatgatctcatctatgagttaaatcaggtg
tctcccaacgtactcctggctgtcctcccacagctggagtttaaactcaagagtaatgaa
gagcatgagcgaaaacatgtgacaaaattgctggcaaagatgttctcagaacctggatct
gacctggcgaatcagaacaaaccactgtggtactgttttctaggcagattcaatgacatc
agtacatctgtacggatcatctgctgttcgtttgcacagtacttcgtgctgaaccacccg
gagctcactaaagatatccttgagcaactgaaggtgcggcagcacgaccctgaggagact
gtaaggattgaagtcatcaactgtgtcatgaatgtcgcaaagaaggacttcgactttgtc
aatgaagaaatgatgaccttcatcaaagagagaaccttggacaaaaagttcaagatccgg
cgtgaaggtctgcttggtctgggcaccatgtacaagcaggtgatgaccaaggagaccatc
aacccccaacatgagaagaaggtcgcgtggatcaagaacaaggtgttccacgcatactac
cagaacagcaatgatgacaggttacttgttgagcggatcttcaacatcaacctggtgccg
tacatgctgcctgcggatgttcggatgcttagacttctgcgcctctactgtaccctggat
gaccatgccgtcaaagcatttaatgaattattgaagcacagaagctcggttcgagttcaa
gtgatgcagctactagaggctatagaattacatggacaacccaatgccccgccactcttc
cctagactggcaggtcttgttcggacgctacctgagcaacagaagccccaggaatacctg
aagaagttcagccagaagctgcgagatgacaagcggatgcggcacctactcaaggtggtg
gtgcaccctgaatgctcctgtaagaaggcagaggaggctgtgaaagagatattgaagaaa
attgggtgtaatcctggacaggccaactacatgtacaacctggtcaagtcactactggaa
cgtatcgccccggtaatgattgacgctgttgccatggagaagcttgtgaatcatgtaaat
gagacgttgacaggacttggtgagaacatggagggcatccacaatgctggagagaagtcc
gtcaagttgctgctggccctgtcatatgcatatccacatcattttcggacggcggaagtg
tttgaaaagttcctcactttcttgaatcatgatgacgacacagtcagtgatattacacaa
cagatcatcaccaacacaggctcgaacctgcagaggatgcacccagacatatactcgagt
ctggtgcccgtgctggtccgtacagccaagatgggcaacccaaagcagacgaagcatgcc
atcagatgcatcagcgtagtgtgcaagaacaaagagcctattctggcacaggtgttcgag
tatgtgaagaggaacctagatcccgagtcagccaactacatcacatcaatagtagcattg
ggacatatagccaagttgtgtcctgaagagttcgccacggacatgaaatccattgtatcc
agaatcatagtgaaagatctcctcatgcaggacaggacagacagtgtggaggcaacagaa
agctggtatagtgaccacctggtgtcagaagaaacgcaagcaaaggtgcaagcgatgaag
ctgctggtgcgatggctgcaggggctgaagagcaaccaaaacaactcaggcacctcgaca
ctccggctcctctacacagtcatcatacatgagggggatctcatggaacatggcaggatc
aataagcccgagctggctcgactgcggctccaggccggctgctgcatgctgaagctggcc
gaggagacatgctactctgacatcatcccttgtgaacagttccaggccctggcactcctc
atcaatgatagctgctatcatgtccgagtcaagtttgccatcaagttgcacaagggcctc
ctgaacatgcgcctgccacttgaattcatgagtatcttctccctggcagccaatgatcca
ctgaaagagaggcagcgtcagctcaaacagttccttaacgtcaacattcagaagaggcgc
gactacctcaagcagaaccccgcagcgagaaaccgaatgtttgccatcctgccagactac
atcctgccctacactgttcatctcctggctcacgaccctgacttcaagaccttccagcag
acagatgcactcaagaacatcaaagactgcctgtggtttgtgatggaccctctaactggc
cgcagtgaagactacaactatgccttcttccggcggatgatagagaacatgaaacagacc
aaagatgcccagtgccccgatgatgatgatatgaacaaaaagttgtatgctgtatgtgat
gtggccctggggctaatgaacaccaagaccaccaacatcaccctgaaggacaacaacaca
gagcccgtcctgccggccaaactcttcaccaagcctgacaagtcgtacaccaacacaaaa
agttaccttccaaaagacttcaactttgatgggccaaggaggaagggagtgcaggcactg
attgatggtccgccccgctcaggctatggcagcaagcccgatcccaccaccacagagatc
atcgtggagagtcctgggccagtcgttaacccacatccaaaggttcctcgcaccaagagg
ggacctctcagaaaaaagaaagaggaggaaccagggaaggagaatgacggtgattccaat
gagtcagattccctggagaagaactgtggagactcagacaagtcctcaagtccagaagtg
gccaagaaaagtacccgaagctcttctcaagataagaactctgacgaatctcagtcatcg
agtgaacacacaagcaggggaggtaggggtgtaaaagcagggactaaacaaacaagactc
gaagactttaaagtgaaactttcccctgctaagaggggcaaggattctgtgaaaaaatct
cttgtgaatggcacaaataaaaggactgcgaaggcaggtgagggggacggtagtgaaagt
gcaaaacattctcggaaacgtcatgggagttcagaagaggatgtgccatcaaaacgaaca
cgaggcgcaacctcagaggacgttgaatcacagagaaatactagggcagcagatacaaaa
aaatcaaaagggacaaaagataagaatggtggtgggaagagctataactgtgacgtcagt
gaaactgacagtgtgtccaaggagggctcagtgtccacgccaggagcatcaccacggaaa
cgcagagcctcgtccccatctcctcagccttctgctcaggttaaaaggtcccgtctgacg
cgcagcaacataaagaccactgacagtgaccaggagatcgttccctcacccacacccagt
gcagaaccacagaagaccctgcaaaccaaaaaacaagaaactctggtgaagaagaccaat
gtgaggaatgtgcggcgagcaaaggcgatgtccaatggcacatctgatggagaggacaca
gcagagacggactccccgtcgtcgcctccgcggagggttgcagcactcaccagggccgtc
cagtcagtcggggcaggagaggatgctgaaggaggggttcgaagaaaaacacgatccagg
aagaaatag
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