Haliotis rufescens (red abalone): 124115638
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Entry
124115638 CDS
T07893
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96-like isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124115638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124115638
03036 Chromosome and associated proteins [BR:
hrf03036
]
124115638
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124115638
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
124115638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
124115638
NCBI-ProteinID:
XP_048244212
LinkDB
All DBs
Position
Unknown
AA seq
1871 aa
AA seq
DB search
MFGQKPMGFGAGFGGGTSSTFGSSTPFGQNNNSFGNKPAGAAGFGTPAFGSTTPAAGGLF
GANNNTSTGGLFGQTNASTFGNQSTGFNFGNTPSTSSGGAGGLFGQTQTQSAGGLFSTPQ
STTSAFGAKTPGFGGFGTSTAPAGGLFGQQNQANTGGMLFGQAGAAGFANNANGTTVKFN
PPSGQDTMMKNGVSASINTRHQCITAMKEYDNKCLEELRLEDYQANRKGKQQGTGGAGGG
LFGSTPATSSTGFSFGQQPQQQQQQQQQASTGFAGQNSFGTNTSTASTGLFGQTNPQASG
GMFGQNKPLFGGASTTTTASTTGFGFGNTNQAAGLFGQNQQNKPLFGTATTQSSLFGANT
STAPATSFNFGNTGGFGTQAPSAGLFGSKPAGFGAATTSAPGFFGQGGNLFAKPTTTSSF
GFGGTSTGTAGFGGFGGFGSTANTGGAGLFGNKPGGFGAAAASTLGGPTNSFNFGQTGQT
GAGLFGANNMNKPSTFGFNFNSGQTTASTGFGGVVTGSGFSLGGNTSTLGTTTNPSASNN
QLQQQLLALTSSPFGDSPLFWNLKQNSEKREEVLKPTNPAAQKAALSSSSQYKVSPRPTA
KIKPKSLHSLMNGSKSQLFDGLEDEDFSFGNDTFMPRRSVKKLTLKKVNGDSSNMSRASS
QTDEQPDLQSFSQDTPRPKPITRTLQADLDRAAQSPDTEPILRTKSITEPTRHSPMKDTT
SLDDTIAALNSKNKVLSGNSHSDMNKSHSEQDPNVSIEPQAQMEDFEPHPTGIILTRPGY
YTSPSLDSLVELIDENGDCFVDDFTIGRENYGSLFFPGSTNVANLNLDEIVHFRRKEVIV
YPDDDKKPPLEEGLNKIAEVTLDCVWPSDKSTRSPIKDSSRLRTMGYQTKIEEITAKIGA
KFIDYRPETGSWVFQVKHFSKYGLVDDSDEEEVSESEKKKLKLANEQQLQIQKLKIQTEG
QMKGKEVKGQGDIDFQLQGLTGKPVSPPKEGYEAHYAQSEGMDDFDEDMPDITMEKFPRD
MEDSDDDMKGMTDTPSSHRLASSMGVSAHSMQVMKASFFGDDDYQDDFKGKLSGFTSGQT
FLKQQDKTMPSLFSPALKSKYVSPLRVTQSPVPQEMQKQPPGLFSQKIIAPEARRPPQNF
GHPPLAEHMLLTSGLSQKDTPRKIVGSRVKRDIPPVSDSLMYKKQELIVDAGCLMGRSFR
VGWGPGWTLVHSGQPSNYKEKEAPRQTPFSLLPGIQGGKPVRAGSKAWTVTCEKMDVADY
LTGNDKTVISTHEEMLDVQLENSQRDTDGGCPLFVPSPGVDSLHQYAQLGEKLLEENSGH
PDESSVDHIRMVWNLCVALWGNLPEFRYSDTDEYAVSQARREAFSKWLSETAQPKIKEEV
QESKFKSQGHLIAILSYLSGRQITDACTLAQKSGDHRLALSLAQAVGSNVARQMLAQQLE
EWAELGANHFIDQVRLKIYSLLSGQLVWSSSTAVNTCDNMDWKRALALHLWYHCKPNASI
SEALSQYEDAFKSRTSFGKYSNSPLPPYLEDDDSYEEEEEAMDERDDHVVRDTCYHLLKL
YCQKGHRLERILNPTTSTANQLDYRLSWHLYQVLQSMSYHHVSPYHAACLHTSFAAQLEA
LHLWHWAVFALLHIEDALRRETAVRSVLERHVTLSKSPKYLHKEEFVRERLRVPHAWIHH
AKAIKARSENKYHDEAWHLLKAAQWNEGHKVILAHIAADAIINENFAYLRRYLEELSPPE
ISSSVLDWSTGGKVFLDYINLCQRLENLKQGTPSAYDLERLQPAVTSLCNRVGSLECRSS
KERLCQSEMAKKSANLLGTLLTFQSAGSATGRPPTRLVASHISGLPMPEDYALQELRELT
RSHLLEMTMGT
NT seq
5616 nt
NT seq
+upstream
nt +downstream
nt
atgtttggacaaaagccaatggggtttggagctggatttggcggtggcacatcttccaca
tttggaagttcgacaccatttggacaaaataacaactcgttcgggaacaagccagctgga
gctgctggatttggaacgccagcctttggttcgacaacgccagccgcaggaggcttgttt
ggcgccaacaacaacacaagtactggaggcttgtttggccagactaatgcaagcacattt
gggaaccagtcaacaggattcaattttggcaacactcccagcacatcaagtggaggggct
ggagggttgtttggacagacacagactcagtcagcaggtgggctgttctcaacaccacag
tcaaccacgtcagcttttggagcaaagactccaggatttggtggattcgggacttccacc
gctcctgccgggggattgtttggccagcagaaccaggcaaacacaggggggatgttgttt
ggtcaggctggggcagcagggtttgctaacaatgccaatggcactacagtcaagttcaac
cctccgagtggccaggatacaatgatgaagaatggggtgtccgccagcatcaatacgaga
catcaatgcatcacagccatgaaggagtatgacaacaagtgtcttgaggagctgagactt
gaagactatcaggccaatcggaaaggcaagcagcagggtactgggggtgccggtggtggt
ttgtttggttctactccggcaacgtccagcactggcttctccttcggccagcaaccgcag
cagcagcaacagcaacaacagcaggcatcaacaggctttgccggtcagaatagctttggt
acaaacacatctacagcaagcactggcttgtttggccagaccaaccctcaggctagtggt
ggaatgttcggtcagaacaagcctctgtttggtggcgccagtaccaccacaactgccagt
accactggcttcggatttggaaataccaatcaagcagcagggttgtttggacaaaaccaa
cagaataagcctctgtttggcacggctactactcagtcctctttgtttggtgccaacaca
agcacggcgccagcaacatcattcaactttggtaacaccggaggctttggcacgcaggcg
ccatcggctggactgtttggtagcaagcctgcgggatttggagcagctacaacttcagcg
ccaggattttttggtcaaggtggcaatctctttgccaagccaacaacaacttcctcgttt
ggatttggtggtacgagtacaggcacagcaggctttggagggtttggaggttttggttcg
acagcaaacacaggaggagctggtctgtttggcaacaagccaggtggttttggagcggct
gcagcctccacattagggggcccaacaaactccttcaacttcggtcaaactggacagact
ggtgcaggactgtttggtgccaacaacatgaacaagccttcaacctttggcttcaacttc
aacagcggtcagactacagcgtccacaggttttggaggtgtagtaactggctccggcttc
tcacttggaggaaacaccagcacgctgggaacgacaaccaacccatcagcaagcaacaac
cagcttcagcagcagctcttggcactcaccagctcaccgtttggagattcccctctcttc
tggaatctcaaacagaactctgaaaaaagggaggaagttcttaaaccaaccaaccctgct
gcccagaaagctgccctgagttcttccagtcagtacaaagtgagtcctcgacccacggcc
aagatcaagcccaagtcactacactcactcatgaatggaagcaagtcccagttgtttgat
gggctggaggatgaggatttcagttttggcaatgacacgttcatgcctcgtcgaagtgtg
aagaaactgactctcaagaaagtaaatggagactcttccaatatgagcagagcctcatca
cagactgatgaacagccagacctacaatccttcagccaggacacacccagacctaaaccc
atcacaagaacactacaagctgacttagatcgtgcggcccagagcccggacacagagcca
atactacgtaccaagagcatcacagaacctaccagacactcccctatgaaagataccacc
agtctggatgacactattgctgctctgaattccaagaacaaagttctgtcagggaacagc
cattctgacatgaacaaatctcacagtgaacaagatccaaatgtctccatagagccccag
gcacagatggaagacttcgagccccacccaactgggatcatcttgaccagacctggctac
tacacgagtccgtcactagacagccttgtggagttgatagatgagaatggagattgcttt
gtggatgattttaccatcggacgagaaaattatggcagtctcttcttccctggttcaacc
aatgttgccaacttgaatctggatgaaattgtgcacttccggcgtaaggaggtgatagtg
taccccgatgatgacaagaaaccccctcttgaggaggggctcaacaagatagccgaggta
acattggactgtgtctggcccagtgacaagtccacaaggtctccaatcaaggactcttcc
agattgaggacaatgggctaccagacgaaaattgaagagatcacagcaaagattggagcc
aagttcatagactacagacccgaaactgggtcgtgggtttttcaagtaaagcacttttct
aaatatggtcttgttgatgactccgatgaagaggaagtttctgaatcagaaaagaaaaaa
ttgaagcttgcaaatgaacaacaactgcagattcagaagttgaagatacaaactgaaggc
cagatgaaggggaaggaggtcaaaggtcaaggggacattgatttccaacttcaaggtctg
actggtaaaccagtttcgcctcccaaggaggggtacgaagcccattacgcccagtcagag
ggtatggatgactttgacgaggatatgccagatattaccatggagaagttccctcgagat
atggaagactcagatgatgatatgaagggcatgaccgacacgccttcctcccaccgcctc
gcctccagcatgggggtcagtgctcacagcatgcaggtcatgaaggcttccttctttgga
gacgacgactaccaggatgacttcaaaggcaagctgagtgggtttacatccggccagacc
tttctgaagcagcaggacaagacaatgccaagtctgttcagccccgcactcaagtccaag
tatgtgagcccactgagggtgacgcagtctccagtaccccaggagatgcagaaacagccg
ccaggtcttttctcacaaaagataatagccccagaagctcgccgtccccctcagaatttt
ggccatcctccactagccgaacacatgctgttgacgagtgggctgagccagaaggacaca
cccaggaagattgtggggtcgcgagtgaagagagacataccccctgtcagtgactccctc
atgtacaagaagcaggagctgatagtggacgcaggctgcctgatgggcaggtcattccgt
gtgggctgggggcctggctggacactggtacacagtggccaaccctccaactacaaggag
aaagaggcacctcggcagacaccattctccctgttacctggcatccagggtgggaagccg
gtgagggcaggcagcaaggcttggactgtgacctgtgagaagatggacgtagcagattac
ctcactggcaatgataagacagtcatatccacccatgaggagatgctggatgtgcagctg
gagaactcccagcgagacacggatgggggctgcccactgtttgtgccatctcctggtgta
gactctcttcatcagtatgcacagctgggagagaagctcttagaggagaacagtggacat
cctgatgagagcagtgtggatcatatacggatggtgtggaacctctgtgtagctctttgg
gggaatctccccgagttcaggtactcagacactgatgagtatgctgttagccaggcacgg
agagaagccttctcaaaatggttgtcagagacagcccagcctaagatcaaggaagaagtg
caggagtccaagttcaagagtcaaggtcacttaatagccattttgagctatttaagtggg
agacagataactgatgcatgtacattggcacagaagtcaggtgatcacagattggcgctc
tcattggctcaagcagtcggcagcaatgttgctcggcagatgttggcccagcagctggag
gagtgggcagagcttggggcaaatcactttatcgaccaagtaagactgaagatctactcc
ctgctgtctggtcagctggtgtggtcatccagcacagccgtcaacacatgtgacaacatg
gactggaagcgagcccttgccttgcatctatggtatcactgcaagcccaacgcaagcata
tctgaagccttgtcccagtatgaagatgccttcaaaagccgcacctcattcggcaaatac
tccaactccccactgcctccgtatctggaagacgatgacagttacgaggaagaggaggag
gcgatggatgagcgagatgaccatgtggtgcgggacacctgctaccacttgctcaagttg
tactgtcagaagggccataggctggagaggatcctcaaccccaccacatccactgccaac
cagctggattaccgtctcagctggcacctgtaccaggtgttacagtccatgtcctaccat
cacgtctccccctaccatgctgcctgtcttcacaccagctttgcggcacagctcgaagct
ctccatctctggcactgggcagtatttgccctgctacatattgaagatgcactcagacga
gagactgcagtaagatcagtattagagcgccatgtgacgctgtcgaagagccccaagtac
ttacacaaggaggagtttgtgagagagaggcttcgggttcctcacgcatggatacaccat
gctaaggctataaaagcaagatctgagaacaaataccatgacgaagcatggcacctgctg
aaggcagctcagtggaatgagggacacaaggttatcttggcacacatagctgctgatgct
atcattaatgagaactttgcctacttgcgtcgctacttggaagagttgtctccccccgag
attagttcttcggtgttagactggtccacagggggaaaggtgtttcttgactacatcaac
ttgtgtcaacgattagagaatctcaagcagggaacacccagtgcttatgatctggagaga
cttcaaccggccgtcacatccctctgtaacagggtgggcagcctggagtgcaggagttcc
aaggagagactctgccaatctgagatggctaaaaaatcagccaaccttcttggaactcta
ctgacattccagagtgcaggatcagcaacagggcgccctccgacaagacttgttgcatct
cacatcagtggtctacccatgccagaggactacgcccttcaggagctccgagagctgact
cgtagccacctgctggagatgaccatgggcacgtag
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