Haliotis rufescens (red abalone): 124116680
Help
Entry
124116680 CDS
T07893
Name
(RefSeq) vacuolar protein sorting-associated protein 13A-like isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124116680
Membrane trafficking [BR:
hrf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
124116680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Pallilysin
Motif
Other DBs
NCBI-GeneID:
124116680
NCBI-ProteinID:
XP_048251085
LinkDB
All DBs
Position
Unknown
AA seq
3275 aa
AA seq
DB search
MVFESLVVELINKFVGDYVENLDASQLKLGIWGGDAVLQNLDLKQSALDDLDLPVKIKAG
HVGKLTLKIPWKNLYTEPVIAQLDGIYALAVPNAGIKYNAEKEEKAKQEAKQKKLKQIEE
RKKAEADKDKPKEEKPDTFVEKMATQVIKNLQIKVNNIHVRYEDRFTNPKRPFAIGITLQ
ELLFQTTDESWQPCVIKDAVTQIFKLIRLDSLGVYWDSCTKMYDSLPKEDILNTLKSNIA
AQNAQTDYQYLVKPISSVAHLKLNPKPEKNQFTLPKIFMTIVFDNIAVALSKLQYDDMLE
MLEAFERTALLGLYRKYKPDVPLHNNAKAWWHYAYNAVLEETVRRRRRMFSWSHIIQHRL
AMKRYREAYVKKLDKGKASGDVQKAIDECEKLLDVLSITLMKQQAEVEAAKLGAQRKEEQ
GSGWFGGWFGGKKKKATEKPGNDIQEKFYEQFSLDEKNKLYGAIGYEENESDPTLPIDYI
AVRLVTKLNNVSVSLRDPTKKDPQVLRLQLKDVFTSVGQRPAASAVSVEAKIDRLSVFGT
PQNNATPKMVTSLVQEADQVYSLLSINLETNPLDGLADTRVKVSSRPLEIAYDAITVNQL
GDFFKPPKSVRLKQLSQAAMAKFDEVKEQSATGLQHSIEQHKYTEISVDLMSSYVLVPEG
GLMKKGVKMLLLDLGSLKVSSEKNQSQQIKGKMDSLEEVMARAYDKFNIQLARIQLLFIH
PGEDWHKARWAGQSDMHILRPISINIDLQKCMFDKDPRMAKMKVAGELPLLSLSISDYRL
QEIMALAQGIPTGGGGEAAPPDEVDEEIFKGPNTMVSVAGDEGALLNRASKIQVQQGDKP
AEKTLQRTTSQEFINATDMELKFEIKEILINVAQREGATEAPLLKLVIESVGTQVKMRTF
DMVVEAYVGCLYLQHLKFKASDTMAQQLSKVRAVNDGSLINIINTPNGPGFGKLLMVQYV
KANKEGPEFLTTYKNTEQAITVVFSGLELLLHQGAIISLLEFAQKLQPPSSPATASQKEQ
EKKEREKKEQEKKEQEKKEQEKTKDKKPPRKKKGMPEDPNLIDILVNAEMKSFAVAISSD
EKLLTDIKINGIDARVAVQKAQTTVAAVLKDMTIYNPTPDTLYPKILGIEGSEVLKLDVV
AYNNGTAGDKYGDMSCMDTKVDVALGCIRLVFLNRYVTDLLAFLDNFQAAKAKIAEAGEA
MAEYSADAVQSLQETASRIGLNIAMKAPLIIVPQKSTSSSVLLADLGNLEIANSFHLAGK
NSPNNVPAVLDKMNIVLSSLKLSRAVLVKTGQVEAEVLLLEPVTISVFVNRNLSAAWYHD
QPDMDLGGTLEALTVKMSQGDFTMTMSVLNDNLSEGQSPAKTSSKTDVVPAVEPAVQASQ
TSTTAAAPGSAQQTQAVTEPPTQLVYTKMKFNFQIKSISVTLYSGESKLTTGVCQREAIK
ALGKVALMMFALDGSMMSDTSMVTKVILRDTILDDLRPQSQKGISRLLRMIQRSTTTSRT
STHTANMIDVNFKQNATQDKNIDVKMSSLHVCVCVEFLMTLGDFFTKGMPTPPAGSTTTD
VEKAPSTTTPASTASPAPAAPVPPTSEMVITLEIEKPDIILVEDQKNTSSNALMLNLGLM
FKLRNTPDVQSMQASIKRLQIISCVFNKRDKPGTEVLQPCDISFISSAPYGKDHHMDINI
TDLVLNISPAIISTMAAISAGFATKPAEEEGPSREPVPVGLWTIKKVEECNFWYLKSIEE
GLAADTEPALTNGEVAEEVGMQRGEQLILNLPSLVIKLEGGVGHRTVPLLIVESAFQAEV
RDWSSKLLVDSSLLLEVAYYNEKLAVWEPLVEPILEDGKPRRWELGLEVVQNDDLPPLPP
EDAEDTVVLPLPKMSVSIKSTDAMQLTMSKACLEVLTNLGKAFNDAYNLVEPSAAIGEVL
TPYVIENYTGMDIVLKLDTSFETPTHAVSGRVKLQSGKKLPLSEKIVAQSSTKASVIKAT
QEGVERKIIFLVEEFGATREVTIKRAEKRMFQINKVSHSGDKWAIVANTQAHIGQKIVAL
QSLIQVKNHLDQAVEVYYRGDTRTDSCGVAPPGGIFNIPLHAIYSSSSELYFRPVEGYDM
CKEPFRWRAAENDGVKQCACPSRQSGHSAFYFNVSPEVENIFFEAGEEPSAKSYVLHLYP
TVILHNLLPFPITYMLEGMAEQQTLQKGVNIPLFHASINESSLEVTPRLDIVIPDYQGKE
WIGRRTLQKNVPELSVWNFESHDGTQKTAMDLGLHCKVNEGSFDVTVYSPYWMLNKTGQS
LCYKGSDADVVLDHAADNEDVVLFSFKAKTLFGTKKKEKEKDGTLERKGKVKEMKQSGKD
KKEESAKCPQARQAQLKIGDTDWSDKFSLDTVGSSGTVQCKSNKRVFEVGVKISLTSSGL
TKIVTFTPFYMMLNTAEYSILCTEATETESWVEVVPGKCLPFWPEQSGKEMTMKAKVKDS
DERTAGFLINKAHTSLMRLNNEYGGINTECQVTESAMVTTFKAYKSGMATVQIVNFTDKS
SLTFFQSGVKNSVHELGPNQTQLYTWENSLGKREMVYTCGNKKDVKNDLSQDGIGEFFFD
SDTKVYWVSFLDGMQRVLLFTQDLALATVAQQAGELERIELEVNICIQGLGLSLVNNYNQ
TEVAFLGITSSGIIWEEKRKRYKAIKMKDGMVLEMAYQRHLAELAVGKTPNARMVLENKF
DVDFSNKDKMMMFKPNKREIRRSFVDGIWLQYKTSAHQLQFHAKINRLQLDSQLKGAVFP
TILAPIPPPKSVAAESVPKPFTEISLMQRKHEHSNIAQIKYAKVLIQEFAVKVDQGFLNA
LLELFASGEPVSREQETKEFEADVKKTDAKLMDVVGLSLAEEQKNFYDYLHLSPIKIHLS
FSLQGGGGDDSGKPTQLHSNVLNIFMQSVGVVLTDVQDVVFKLGYFERSHTFYNQSQLVG
EMTRHYAGQAIKQMYVLVLGLDVLGNPFGLLRGLSEGAVDLFYEPCQGAIQGPEEFAEGL
ALGVRSLFGHAVGGAAGAVSRITGTLGKGVAALTLDDDYQKKRREQLNKRPANAREGFAR
GGKGLVMGVFDGVTGIVRKPLEGAQEEGAKGFFKGIGKGLVGVVTRPTSGVIDFASSSFE
GIRRIAEMSDEVRRLRPPRRFHNDKVIRPYNHQEAEGYAILQETEKGKYAASDEYLAHVV
ISKDGKLVFLVLDKRILLAKRGEIFGSWDCDWTYTWPDLKEGPKKTARGIEIILKEKEKK
KFFGSSSSKKEVPISDPATAERIVTKIEEAMARMK
NT seq
9828 nt
NT seq
+upstream
nt +downstream
nt
atggttttcgaatctcttgttgtggaacttattaacaagttcgttggagattatgtggag
aatttggatgcatcgcaactcaagttgggcatttggggcggagatgcggtgctgcagaac
ctggacctaaagcagagtgccttggatgatctggacctgcctgtaaagatcaaagctggt
catgttggaaagttgacattaaaaattccctggaagaatttgtacacagagccagtgata
gctcagttggatggaatctatgcattggcagttcccaatgcaggcatcaagtacaatgcg
gagaaagaggagaaggcgaagcaggaggcgaagcaaaagaagttgaagcagattgaggag
aggaagaaggctgaggctgacaaggacaaacctaaggaagaaaagccagacacgtttgtg
gagaaaatggcaactcaggtgattaagaacctgcagataaaggtgaacaacatccacgtg
agatatgaggaccgttttacaaatcccaagcgtccgtttgccatcggcatcactctccag
gaactgctgtttcagaccacagatgagtcttggcagccatgtgtcatcaaggatgctgtg
acccaaatcttcaagctgatccgcctggactcgctgggtgtgtactgggacagttgcacc
aagatgtacgacagtcttcccaaggaggacattctgaataccctgaaatccaatattgct
gcacagaatgcccagacagattaccagtacttggtcaagcccatatcgtctgtagcacat
ctcaagctcaatcccaagccagaaaagaaccaattcactcttccgaagatcttcatgaca
atagtgtttgacaacatcgcagtagctctctccaaactacagtatgacgacatgctggag
atgttggaggcattcgagaggacagcattgttgggcctctatcgcaaatacaaaccagat
gtgccacttcacaacaatgccaaggcctggtggcattatgcctacaatgctgtccttgag
gagacagttcgacggcgccgacggatgttctcctggtctcatattattcaacacaggctg
gcaatgaagcgatacagagaggcatatgtaaagaagcttgacaagggaaaggcttcggga
gatgttcagaaggcaatcgatgaatgtgagaagctattggatgtgttgagcatcaccctg
atgaagcagcaggctgaggtggaggctgccaagcttggggctcaacgcaaagaggaacag
ggaagtggttggtttggtggctggttcggaggaaagaagaagaaagcaactgaaaagcct
ggaaatgatattcaggagaaattctatgagcagttctctctggatgagaagaacaagctg
tatggagctataggctatgaggagaatgagtctgatcctacactgccaatagattacatt
gcagtccgactggttactaagctgaacaatgtctccgtttctctccgagatccaacaaaa
aaagatccccaggtgctcagactgcagctgaaggatgtgttcacgtctgtagggcagaga
ccagcagccagtgctgtgagtgtggaggccaagatagaccgactcagtgtatttggaacc
ccccagaacaacgccacgcctaagatggttacatctctcgtacaggaagctgatcaagta
tactcactcctctccatcaacctggagaccaaccctctagatggtctggccgacacccgg
gttaaagtgtcctccagacctctagagatagcatatgatgctattacagtgaatcagctt
ggcgacttctttaaacctcccaaatctgtgcggttgaagcaactctctcaagcggctatg
gcgaagtttgatgaagttaaggagcagtcagccacgggtctacagcactcgattgaacaa
cacaagtacaccgagatcagcgttgatctcatgtcctcctacgtcctggtaccagagggg
ggtctcatgaagaaaggtgtgaaaatgctccttctcgacctcggtagcctcaaggtttcc
agtgaaaagaaccagtctcagcaaatcaagggcaagatggacagtctggaggaggtgatg
gccagggcatatgacaagttcaacattcagcttgcacgtatacagctgctgttcatacat
ccaggtgaggactggcacaaggcacgctgggcgggacagtcagacatgcacatccttcga
ccaatatccatcaatatcgaccttcagaagtgtatgtttgacaaagaccccaggatggct
aagatgaaggtggctggtgagttgcccctgcttagcttgagcatctcagactatcgactg
caggagatcatggcgctggcccagggcatccccactggaggaggaggagaagcggcccct
ccagatgaagtagatgaagagatattcaagggccccaacacgatggtgtctgtggcagga
gacgagggagccctgctgaaccgagcctccaaaatacaggtgcaacaaggggacaagcct
gcagagaagacgctacagaggaccacatcccaggagttcatcaatgccactgacatggaa
ctcaagtttgaaatcaaggagatattgatcaatgtagcacagagggaaggtgcaacagag
gcgccgctgctgaaattggtgatcgagtcggttggcacccaggtgaagatgaggacattt
gacatggtagtcgaggcctatgtgggctgcctctacctgcaacacctcaagttcaaagcc
tccgacaccatggcccagcaactctctaaagtccgagcggtcaacgatggctccctgatc
aacatcatcaacacaccgaacggccccggctttggaaagctgctgatggtgcagtacgtc
aaggccaacaaggagggtcctgagttcctgacaacgtacaagaacacggagcaggccatc
actgttgttttctcaggccttgagctgctactgcaccagggagccattatcagtctcctc
gagttcgcacagaaactacagccaccatcctcccctgccacagcaagtcagaaggagcag
gagaagaaggaacgggagaagaaggaacaggagaagaaagaacaggagaagaaggaacag
gagaagaccaaggacaagaagcccccaagaaaaaagaagggcatgccagaagacccaaac
ctgattgacatcctggtcaatgctgagatgaaatcatttgctgttgccatctcctcagat
gagaagcttctaacagacatcaaaattaatggtattgatgcccgggtagcagtgcagaaa
gcccagaccactgtggcagctgtgctgaaggatatgacgatctacaacccgacacctgac
acgctgtaccctaagattcttggtattgaggggtctgaggtgctgaagctggacgttgtt
gcctataataacggcacggccggtgacaagtacggcgacatgtcatgtatggacacgaag
gtggatgttgccctgggctgcatcagattggtcttcctcaacagatacgttacagacctg
ctggctttcctggacaacttccaagctgccaaggctaaaatagcggaggctggagaggcg
atggcagagtattctgcggatgcggtgcaaagtttacaggagacagcttcccggatcggc
cttaacattgccatgaaggccccactcatcattgttccccagaagtccacatccagcagc
gtcctcctggctgaccttggtaatctggagatcgctaactccttccacctggcaggcaag
aactcccccaacaatgtcccggctgtattagacaagatgaacattgtactcagctcactc
aaactgtccagggctgttcttgtcaaaactggtcaggtggaggcggaggttctgctgttg
gagcctgtgaccatatctgtgtttgtgaaccgcaacctctccgctgcctggtaccatgac
cagccagacatggacctgggcggcacactggaggcactcacagtgaagatgagccaggga
gacttcaccatgacgatgagtgtactgaatgataacttgtcagagggacagagcccggca
aagacctcttccaagacagatgttgtacctgcagtggagcctgctgttcaggcatcccag
accagcactacagcagctgcccctggcagtgcccagcagacacaggcagtaactgagccc
cctacacaactggtgtacaccaagatgaagttcaacttccagatcaagtctatctctgtc
acactgtactcaggagagtcaaagctgacgaccggcgtgtgtcagcgcgaggccattaag
gcactgggcaaggttgcactgatgatgtttgccctggacggaagcatgatgtccgacacc
tctatggttaccaaggtgatcctccgagacaccattttagacgacctgcgccctcagagt
cagaagggcatatcaaggctgttgcggatgatacagaggagtacgacaacgtcccgtaca
tcaacacacaccgctaacatgattgatgtcaacttcaagcagaacgccacacaggacaag
aacattgatgtgaagatgagcagcctgcatgtgtgtgtgtgtgtggagttcctcatgaca
ctgggcgacttcttcaccaagggcatgcccaccccgcctgctggctcaaccaccactgat
gtagagaaagcaccttcaacaactacaccagcttcaacagcctcacctgccccagccgca
ccggtgccaccaactagtgaaatggttatcactctggaaatagagaagcctgacattatc
ttggtagaagaccaaaagaacacaagctccaatgcccttatgctgaatctgggcctgatg
ttcaagttacgcaacaccccagatgtgcagtctatgcaggcaagcatcaagagactccag
atcatctcctgtgtcttcaacaagagggacaaaccaggaaccgaggtgctccagccgtgt
gacatctctttcattagcagtgcgccctatgggaaggatcatcatatggatatcaacatc
actgacttagttctcaatatctctccagccatcatctcaaccatggctgccatatcagcc
ggatttgccaccaagcctgcagaagaggaaggtccgagcagagagcctgtccctgttgga
ctgtggactatcaagaaggtggaggagtgcaacttctggtatctcaagtccattgaggag
ggccttgcagcagacacagaacctgccctcacaaacggagaggttgccgaggaggtcggc
atgcaacgtggagaacagttgatcctgaacttaccatcccttgtgatcaagcttgaaggg
ggtgttggccataggacggtgccgctactgattgttgagtcagctttccaggctgaagtc
cgtgactggagctctaagcttttggtggacagctcgctgctgctggaagtggcgtattac
aatgagaagctggctgtgtgggagccgttggtggagcccattcttgaggatggaaagcca
cgccgctgggaacttggactcgaggtggtgcagaatgacgacctgcccccactgccccca
gaggacgccgaagacactgtggtccttcccctgcccaagatgagcgtcagcatcaagtct
actgatgccatgcagctcaccatgtccaaagcctgcctggaggtgctcaccaacctgggc
aaggccttcaatgatgcttacaacttggtggagccatcagctgccattggggaggtcctc
accccctatgttattgagaattacaccggcatggacattgtgctcaagctggacacttca
tttgagactccgacccatgcagtgagtgggcgtgtcaagctgcagtctgggaaaaagctg
ccactgtcagagaagattgtcgcccagtcatccacaaaggcctctgtcatcaaggcaacg
caggagggtgtggagagaaagataatattcctggtggaggagtttggagctactcgagaa
gtgacgatcaagcgggcagagaaacgcatgttccagatcaacaaagtgtctcacagcgga
gacaagtgggccatcgtcgccaacacacaggcacacattggccagaagattgtggctctg
cagtcactcatacaggtcaagaatcacttagaccaagcagtggaggtgtattaccgcgga
gacacacggactgacagctgtggagtggcacctcctggtggcatcttcaacatcccactg
catgccatctactcctcatccagtgaactctacttccgaccagtcgaaggatatgacatg
tgtaaggagccattcaggtggcgggctgcagagaatgatggagtgaagcagtgtgcgtgt
ccaagtcgacagagtggacactcagccttctacttcaatgtgagccctgaggtggagaac
atcttctttgaggcaggcgaagagccctccgccaaaagctatgtcctacacctgtaccca
acagtcattcttcacaacctgctgccctttcccatcacctacatgttggaggggatggcg
gagcagcagacgctacagaagggggtgaacatcccgcttttccatgccagtatcaacgag
tccagccttgaagtgactccacgcctggacattgtgattccggactatcagggcaaggag
tggattggccgcaggacgctgcaaaagaatgtccccgagttgtctgtgtggaacttcgag
agccatgatggaacccagaagactgctatggatctcggtctgcactgtaaggtaaatgag
ggcagctttgacgtgaccgtgtacagcccgtactggatgctgaacaagacaggacagtcc
ctctgttacaaggggtctgatgctgatgtagttctggaccatgcagctgataatgaggat
gttgtcctgttctccttcaaagccaagactctctttggtaccaagaagaaggagaaggag
aaggacggcacactggagaggaagggcaaagtgaaggagatgaagcagagtggtaaagac
aaaaaggaagagagcgctaagtgtcctcaggccaggcaggcccagctgaagatcggtgac
acggactggtcagacaagttctccctggacacagtgggcagttcaggcacagtgcagtgt
aagagcaacaagagagtgtttgaggtgggtgtgaagatcagcctaacatcgtctggtctc
accaagatcgtaacattcacaccattctacatgatgctcaacactgcggagtattccatc
ttgtgtaccgaggccacagagacagagtcctgggtggaggttgttcctgggaagtgtctt
ccattttggcctgagcagtcagggaaggaaatgacaatgaaagccaaagtgaaggacagt
gatgaaaggacggcagggttcctcatcaacaaggctcatacctctctcatgcgcctcaac
aatgagtatggcggtatcaacacggagtgccaggtgactgagagtgccatggtgactacc
ttcaaggcctacaagtctggcatggccactgtacagattgtcaactttacagacaagagt
tcgctcaccttctttcagagcggtgtgaagaacagtgtgcatgaactgggccccaaccag
acccagctgtatacatgggagaactcgcttggcaagagggagatggtctacacctgtggc
aacaagaaggacgtcaagaatgatctcagccaggatggtatcggggagttcttcttcgac
tcggataccaaggtttactgggtgtcattccttgacggcatgcaaagagtgctgctgttt
actcaagatctggccttggcaactgttgcacaacaggctggtgagctggaaaggatagag
ctagaggtgaatatttgtatacagggtctcggcctgtctcttgtcaacaactacaatcag
acggaagtggccttcttgggtatcaccagttctggcatcatctgggaggagaagcggaag
cgttacaaggccatcaagatgaaggatggcatggtactggagatggcctaccagaggcac
ctggctgagttggctgtaggcaagactcctaatgccaggatggtgctggaaaacaagttt
gatgtggacttcagcaacaaagataagatgatgatgtttaagccgaacaagcgagagatc
cggcgtagttttgtagatggaatctggctgcagtacaagacatcagcccaccagctgcag
ttccatgccaagatcaaccgtctgcagctggacagtcagctgaagggagccgtattcccc
accatactagccccaatacctccacccaagtcggtggctgcagagagtgtgcccaagccc
ttcacagagatcagtctgatgcagaggaaacatgagcacagcaatattgcacagatcaag
tatgccaaggtcctcatccaggagtttgctgtaaaggtggaccagggattcctcaatgcg
ctgctggagctgttcgcctccggggagccagtgtcaagagagcaggagacgaaggagttt
gaggcggatgtgaagaagactgatgcaaagctgatggatgtggtgggcctgtctctggcc
gaggagcagaagaacttctatgactacctccacctctcccccatcaagatacacttgagc
ttctccctgcaaggcggcggcggtgatgacagcgggaagcccacacagcttcactccaac
gtcctcaacatctttatgcagagtgtgggagtggtgctcactgatgtccaggatgtagtc
ttcaaactggggtacttcgagcggtcccacaccttctacaaccagagtcagcttgtggga
gagatgactagacactacgccggacaggccatcaagcagatgtacgtgctggtgctgggg
ctggatgtactgggcaaccccttcggcctcctccgcgggctgtcagagggagcagtcgat
ctcttctatgaaccgtgtcagggtgctatccaaggaccagaggagttcgccgagggcctg
gcgcttggtgtacgcagcctgttcggacatgctgtcggtggcgccgcgggagccgtgtct
cggatcacagggacattgggtaagggcgtggcggccctgactctggacgatgactaccag
aagaagaggcgagagcaactcaacaagcgaccagctaatgccagagagggcttcgctcgt
ggaggcaaggggctagtgatgggtgtatttgatggtgtgactggcatcgtcaggaaaccc
ctggagggtgctcaagaagagggagccaagggtttctttaaaggtatcggcaagggtctg
gtcggtgtggtcacaagaccaacaagtggagtcatcgatttcgccagcagctcatttgag
ggaatcagaaggattgctgaaatgtctgatgaagtacgcagactccgcccgccccgacgc
ttccacaatgacaaggtgatccgcccctacaaccaccaggaggcagagggctacgcaatc
ctgcaggagactgagaaggggaaatatgctgcctcagacgagtacttggcccacgtggtc
atcagtaaagacgggaaacttgtgttccttgtactggacaagcgaattttacttgctaag
agaggagagatcttcggatcatgggactgtgactggacgtacacatggccagatctgaaa
gagggtcccaagaagactgcacggggcattgagattatcctcaaggagaaggagaagaag
aagttttttggcagtagttcctctaagaaggaagtgcctatctctgatccagccactgct
gagcgaatcgtcacaaagattgaagaggctatggccagaatgaagtaa
DBGET
integrated database retrieval system
