Haliotis rufescens (red abalone): 124116885
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Entry
124116885 CDS
T07893
Name
(RefSeq) ATP-dependent RNA helicase HAS1-like
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124116885
03009 Ribosome biogenesis [BR:
hrf03009
]
124116885
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124116885
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124116885
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
90S particles
Helicases
124116885
Pre-60S particles
124116885
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
Helicase_C_2
SecA_DEAD
TMEM219
AAA_22
Motif
Other DBs
NCBI-GeneID:
124116885
NCBI-ProteinID:
XP_048239613
LinkDB
All DBs
Position
Unknown
AA seq
630 aa
AA seq
DB search
MAQSDDGPTLKDKQKLRQIQTLIKGGRLDVKELKTLKKLESKIQRRLTAELTEESETEDS
GREGTRKVGGTSRKRKPSMSLENKGAEAAKKICSTADVSADRGNTDTDDDGSSESGEDEG
GNTVQTMEISQLPGSSVGAGIVTDLSFASLKGKVADNSLKGIEDMGFTYMTEIQAKSIPH
LLEGRDLMGAAKTGSGKTLAFLIPAVDLMYKLKFMPRNGTGCIIISPTRELSMQTFGVLK
ELLKYHCHTYGLVMGGTDRKQEAKKLAKGINILVATPGRLLDHLQNTPDFMFKNLQCLII
DEADRILDLGFEEEMRQIIKLLPKRRQTMLFSATPTRKTEDLARVSLKKEPLYVGVDDRK
DAATVEGLEQGYVVSPSDRRFLLLFTFLKKNRKKKIMVFFSSCMAVKFHSELLNYIDLPV
MCIHGKQKQSKRTQTFFQFCNSKEAILLCTDVAARGLDIPLVDWIIQYDPPDDPKEYIHR
VGRTARGDGGCGHALLILRPEELGFLRYLKQAKIPLHEFEFAWSKISNIQPQLEKLMSQN
YFLHKSADMAYKSYVRAYASHSLKQIFDVSTLDLKKVALSFGLMVPPQTNMELKGRTSQR
RGREESYGYRKDKFGKKAKMFKQVGGRQKR
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggcacagtctgatgatggtcccacacttaaagacaagcaaaagctgagacaaattcaa
acattgattaagggaggtcgtcttgatgtaaaagagttgaagacactgaagaaacttgaa
tccaaaatacagagaagactgactgctgaactgacagaggagagtgagacggaggattca
ggtagagaggggacgagaaaagttggtggtaccagcagaaagcgaaagccatcgatgtca
ctagagaacaagggagcagaagcagccaagaagatttgttcaactgctgatgtcagcgct
gatcgcggcaatacagatactgatgatgacgggtcaagcgagtctggagaagatgaggga
gggaacactgttcagacaatggaaatatcacagttgccaggaagcagtgttggagcaggc
attgtgacagacttgtcgtttgcaagtctgaagggcaaagttgcagacaactccttgaaa
ggaatagaagatatgggctttacctacatgactgagattcaagcaaagtccattcctcac
ttgctggaaggccgggatctcatgggagctgcaaagactggaagcggcaaaacgctggca
ttccttattcctgctgttgacttgatgtacaaactgaagttcatgcctcgcaatggaact
ggctgcatcattatttcgcccactcgggagctgtccatgcagacattcggggtgctgaag
gagctgctcaagtaccactgccacacctatggactcgtcatggggggcacggatcggaaa
caagaggccaagaagctggccaagggaatcaatatactggtggctacgccaggccgcctt
ctggaccatctgcagaacacgccagacttcatgttcaagaacctccagtgcctcatcatt
gatgaagctgatcgaatactggatttgggatttgaagaagaaatgcgacagattatcaaa
ctgttgccaaagaggcggcagaccatgcttttctcagcaacacccaccagaaaaacggaa
gatttggctcgagtatccttgaagaaagaaccattgtacgtgggtgttgatgaccggaag
gatgctgccacagtcgaaggcctggagcagggctatgttgtatccccatcagacagacga
tttcttctcttgttcactttcctgaagaagaatcgcaaaaagaagataatggttttcttc
agttcgtgtatggctgtgaagttccacagcgagcttctgaactacattgacctgccagtc
atgtgtatccatggtaaacaaaagcaaagtaaacgaacacagacgtttttccagttttgc
aattccaaagaagccatattattgtgtactgatgttgctgctcgtgggcttgatatccca
ctggttgattggatcatacaatacgacccacctgatgacccaaaggaatacattcacaga
gttggccgaactgctcgtggggatggcggctgtggacatgcactgctcattcttcgccct
gaagagttgggcttccttcgatatctgaagcaggccaaaattccacttcatgagtttgaa
tttgcctggagtaaaatctccaacatccagcctcagctggagaaactgatgtcacagaac
tacttcctacacaagtcagcggacatggcgtacaagtcttacgtccgggcatatgctagt
catagcctcaaacagatatttgatgtcagtaccttggaccttaagaaagtggctctctcc
ttcggcctgatggtccccccacagaccaacatggaattaaagggtaggacatcccaacgg
cgaggacgtgaagaatcctacggttatcgcaaggacaagtttggaaagaaagcaaagatg
ttcaaacaagttggtggtagacagaagagatag
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