Haliotis rufescens (red abalone): 124117120
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Entry
124117120 CDS
T07893
Name
(RefSeq) integrin alpha-8-like isoform X3
KO
K06584
integrin alpha 8
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04512
ECM-receptor interaction
hrf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124117120
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124117120
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrf04515
]
124117120
Cell adhesion molecules [BR:
hrf04515
]
Integrins
Integrin alpha subunits
124117120
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
FG-GAP_2
ITGAX-like_Ig_3
Integrin_alpha
Motif
Other DBs
NCBI-GeneID:
124117120
NCBI-ProteinID:
XP_046334808
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MIFGKGVYACVTYQKIKMFVSGVVVIFVSLFLQDGRAYNVDIEGAMVHSGEVGSMFGYSV
AQHIDQSTSWLLIGAPKAQTSQPGITKGGAVYRCTTNRKNYCHEIPFDESGNNLKYVART
QDYREIDDKSNQWFGATVRSSGQNGVIVACAPRYVYLSKDYNKREPVGTCYISKSSTTQA
QEFSPCRRDGAWGFHKQGFCQSGLSVALSQDGRKMMVAAVGSWYWQGQLYNYEVKNKEYV
STREGPPEDDDSYMGYASAVGDFDGDNIEDYVVSVPKGDLHLGRVAMFTQNLTNIQNITG
EQVGAYFGYSLAVTDLDGDDLDDIIVGAPFYAVLKTSKTYETGRVYIFYQSEKHTFKASK
KDILDGKESLSRFGHALTKLGDINYDGYNDLAVGAPYAGEDHKGAVYIYHGSKKGIITQV
SQIILPKDLDTGLFTFGYSLSGGMDQDGNTYPDLLVGAYGADKAVFLRTRPVVRVYASLK
IDPVVINLDHRSCSLIDDKRVTCLTVYTCLEYTGQGVAEELFFDLTWELDTLQRNRSREE
QRAYYLTTEKDVVEKNTVKLTKKATWCTSSFAYVLDDISDKLTPIAVDFKFALRTVKSGS
SNRKKRSLDPILDQYIRTSVRTEAQILKNCGRDNVCYPDLRVHSFRVSAAHIIGTTTELE
ILIMVENRGEDAFNTQLFINLPQGVSIKGIQGVQSMQGVAPVSCDRLRINNEDMVNCDLG
NPLPTRAKTNFTLKVSPKDFNGTNDQLVFALEVNSSNPENLTDTVNNYASVSIPVTAAAD
ILINGKSTPEQIIVNTSRVRLNNDQIRTRPVEHLYQVQNLGPSSTETIDLQIYWPSHDND
GEPILPLTSAPEVTKGNGQCQIIFVTPANSSDILRYSLTDPNDVVVVLQEQRSGDRTKRA
NKGRVACTDWCTVIKCTVGYLNPDDNFLIKIRANLMVDEFIRNQMPHALLTSTAFARVVS
MPYKLKSVDPTLFATAKQSIVTDVNIDKPDIGGRPIEIWIIAVAVSAGLLVLLLIIILLW
WCGFFKRRKPEDDGYLVANGSPRNIEDKTFE
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgatctttggaaaaggagtttatgcttgtgttacctaccaaaagataaaaatgtttgtg
agcggagtcgttgtgatattcgtgagcttgtttcttcaagacggaagagcctacaatgtg
gatatagaaggggctatggttcactcaggagaagtggggtctatgtttgggtactccgtc
gctcaacatatagaccaatcaacaagttggctgctgattggagcgcccaaggcccagacc
tcgcagccaggaattaccaagggtggagcagtttacaggtgtaccaccaataggaaaaac
tattgtcatgaaataccttttgacgaaagtggaaataatttaaaatatgtagctaggacc
caagactatagagagatagacgacaagtctaaccagtggtttggagccactgtacggagc
tcgggacaaaatggagtcattgtggcctgtgctcctagatatgtgtatctttccaaagat
tataacaaaagagagccggtcggaacatgttacatttcaaaatcatctacaacacaagct
caggagttttcaccatgcagaagagatggagcgtggggcttccacaaacaaggcttctgt
cagtcaggcctgagcgttgctctctcgcaagatggacggaagatgatggttgcagcggtc
ggaagctggtactggcaaggtcagctgtacaactacgaagtaaagaacaaggagtatgtg
tcgacgcgggaggggcccccagaggacgacgacagctacatgggctatgccagcgccgtc
ggggactttgatggggacaacatcgaagattatgtggttagcgtacccaaaggcgacctc
catcttggcagggtggccatgttcacccagaacctgacaaacatccagaacatcacggga
gaacaggttggtgcctactttggatattccctggcagtgacagacttggacggagatgac
ctggatgatatcattgttggggctccgttctatgcagtcttgaagacctccaagacctac
gagacaggaagagtgtacatattctaccagtcagagaagcacacgttcaaggccagcaag
aaagatattcttgatggcaaggagagcttgtcaagatttgggcacgccctcaccaaactc
ggcgacatcaactatgacggatataatgatctggctgtgggagctccttacgcaggcgag
gatcacaagggggccgtctacatctaccatggttccaagaagggcatcatcacacaggtg
tcacagatcatcctccccaaggacctggacacaggactgtttaccttcggctactctctc
tccgggggcatggaccaggatggcaatacataccccgatctcctggttggtgcctatggg
gcagacaaagcagttttcctaagaactcgccctgtggtgcgtgtatacgctagtctcaag
attgaccctgttgttatcaacctcgaccatcggagctgctccctcattgatgacaagaga
gtcacatgtctgacggtgtacacatgtctggagtacactggccagggcgtggctgaggag
ctgttcttcgacctgacctgggagttggacacgctgcagcggaatcggtctcgggaggag
cagcgggcgtactacctgaccactgagaaggacgtggtggagaagaacacggtcaaactg
accaagaaggccacgtggtgcacctcctcctttgcatacgtcctggatgacatctcagac
aaacttacacccattgctgtagacttcaagtttgcactgaggacggtgaagtcaggaagc
agcaatcgtaagaagaggtcactggaccccatcctggaccagtacatcaggacctcggtc
cggacagaggctcaaatcttgaaaaactgtggccgagataacgtctgttacccagacctc
cgggtccactccttcagggtgtctgcggcccacatcatcggcacgacgacggagttggag
atcctcatcatggtggagaaccgcggggaggatgccttcaacacacagctgttcatcaac
ctgccgcagggcgtgtccatcaagggcatccagggcgtgcagagcatgcagggggtggcg
ccggtgagctgtgaccgtttgagaataaacaacgaggacatggtgaactgtgacctggga
aacccacttccgacgcgagctaagaccaacttcacactcaaggtgtctccaaaggatttc
aatggaaccaacgaccaactcgtgtttgctcttgaagtcaacagttctaaccccgagaac
ctgactgacaccgtcaacaactacgccagtgtctccatccctgtcactgcagcagctgac
atcctcatcaacggaaaatccactcccgaacagattattgtaaacacatctcgagtgcga
ctgaataacgaccaaattcgaacacgacctgttgaacatctttatcaggtacaaaatctc
ggccccagttcgacggagacgatagatctacagatttattggcccagtcatgataacgat
ggggaaccaattttacccctcacgtcagcacctgaggttaccaagggcaacggccagtgt
cagataatatttgtaacacctgctaacagttcagatattctgagatacagcctgacggac
ccgaacgatgttgtcgtggtgcttcaggaacagaggtcaggagacagaacaaaacgagca
aacaaaggccgtgtggcctgcactgattggtgcacagtcatcaagtgcactgtgggatac
ctaaatccagatgacaacttcctgatcaagataagagccaacctgatggtggatgaattt
ataaggaaccagatgccacatgcactcctgacgtcgacagccttcgcccgtgtcgtctcc
atgccgtacaaactgaagtctgtggacccgacgttatttgctacagccaaacagtctatt
gtgacggatgtgaacattgacaagccagacattggtggccggcccatcgagatctggatc
atagctgtggcagtgtctgcaggactgctagttcttctcttgatcattatcctgctgtgg
tggtgtggcttcttcaagaggaggaagccagaggatgacggctacttggttgccaacggc
agcccacggaacattgaggacaaaacatttgaatga
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