Haliotis rufescens (red abalone): 124118245
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Entry
124118245 CDS
T07893
Name
(RefSeq) exosome complex component RRP4-like
KO
K03679
exosome complex component RRP4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124118245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124118245
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124118245
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
124118245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
ECR1_N_2
IPK
DUF6837
Motif
Other DBs
NCBI-GeneID:
124118245
NCBI-ProteinID:
XP_048245546
LinkDB
All DBs
Position
Unknown
AA seq
293 aa
AA seq
DB search
MATVDIRLASARVRQKTGDIEEINNLVTPGDVITTDTGFMRGHGTYMEDEKLHSSVAGVV
ERVNKLICVKPLKTRYNGEVGDVVIGRILEVCQRRWKVETHSKLDSVLMLSSVNLPGGEL
RRRSEEDEKLMRHYLKEGDLISAEVQNVMGDGCLSLHTRSLKYGKLSQGTLLQVSPSLVK
RRKTHFHNLPCGASIILGNNGFIWISPTANEDSDDTGGYEQNLEPVPRADREVIARLRNC
VLALADHQMMLYDTSILYVYEASENHAISEMLKPEVTAELIDLVRQRLEMEGT
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgttgatattcgactggcaagtgcacgtgttcgacagaagacgggtgacatc
gaggagatcaacaatcttgtcacgcctggagatgtcatcacaaccgataccggattcatg
cgtggtcatgggacttatatggaagatgagaaactgcactcctcggtggcaggggtcgtg
gagcgtgtcaacaagctcatctgtgtgaagcctctcaaaacaaggtacaatggtgaggtg
ggggatgtggtgattggtcggatcctggaagtctgtcagcgccgctggaaggtggaaact
cactcgaagctggactctgtcctcatgctgtcctcggtcaacctgccgggcggagaactg
cggcggaggtcggaggaggacgagaagttgatgagacattacctgaaggaaggggacctc
atcagtgcagaggtgcagaacgtgatgggggatggctgcctatctctacacacaagaagt
ctcaagtatgggaagttaagccagggtacgctgctccaagtctccccctcacttgtgaag
aggaggaaaacccacttccacaacctgccatgcggagcttccatcatcctcggcaacaat
ggcttcatctggatctcccccactgccaatgaggacagcgacgacacaggcggatacgaa
cagaacctagagccagttccaagagcagatcgcgaggtgatagcccgactccggaattgt
gtcctggcgcttgccgaccaccagatgatgctgtacgacaccagcattctgtacgtgtac
gaggcctccgagaaccatgcaataagcgaaatgttgaagccagaagtaacggcagaatta
atcgacctggttcgtcagaggctggaaatggaagggacctag
DBGET
integrated database retrieval system
