Haliotis rufescens (red abalone): 124118387
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Entry
124118387 CDS
T07893
Name
(RefSeq) polypyrimidine tract-binding protein 1-like isoform X1
KO
K13218
polypyrimidine tract-binding protein 1
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124118387
03041 Spliceosome [BR:
hrf03041
]
124118387
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
124118387
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124118387
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
RRM_occluded
RRM_NFXL1
Motif
Other DBs
NCBI-GeneID:
124118387
NCBI-ProteinID:
XP_046336427
LinkDB
All DBs
Position
Unknown
AA seq
636 aa
AA seq
DB search
MYVCWYNYGLPHPSAGPTALQTTPTVSAIPQATPAPSPADLLLPVPTSASAAAVAAAAQQ
SIITPLAVSRKRGSEELMSHSPMVTNGTGMSPQHAHNSDISNDAKKVKLDQTNNTNAPSR
VIHIRSLPNDVAETDIVQLGLPFGEMSKVLLLKQKNQAFLEFNDEGSAANMVSYYQTTPS
QVRLKPCYVQFSNHKELSIKTDASHAYQNATAQAALQAAQAVIHARGGNSGAFLETNECN
QTVLRVIVDNILYPITLDVLHSLFSRFGKVLKIITFTKNNTYQALIQFSDPISAKAAKDS
LDGQNVYNGCDTLKIDYSRLMNLNVKYNNDKSRDYTRPELPTGEVTLESTMQQSMLDYFA
PACAPGVMASPFAAAMPGLGGAPLTAYGAPSAAAAAAAHGFGGLQGVNPFSTGMPAMTGF
GPIPGAYGAARLGIPIQAQVGSPVLLVSNLDEQTVTPDALFTLFGVYGDVHRVKILFNKK
DNALIQMAEPSQAQLAITFLDKVKVWGKTIRVAQSKHSVVQMPKEGQPDAGLTKDYVNSP
LHRFKRPGSKNCQNIFPPSAVLHLSNIPKDTEEGEITTKFAEHGAVKAFKFFPKDRKMAL
IQMGSVDEAVMALIAMHNFQMGENSHLRVSFSKSTI
NT seq
1911 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtatgctggtacaactacggattgccccacccatcagcaggacccactgctctc
caaaccaccccaacagtcagtgccatccctcaagccacacccgccccctccccagcggat
cttctcctgccggtgcccacctctgcctctgccgctgctgttgctgccgctgctcagcaa
tccatcatcaccccgttagctgtgtccagaaagagaggatcagaagaactgatgtcgcac
agcccgatggtgacgaacggcacagggatgagccctcagcatgctcacaattctgacatc
agtaatgatgccaagaaggtgaagctagaccagacaaacaacacaaatgccccttccagg
gtcattcacatccgcagtctgcccaacgatgttgcggaaaccgacattgttcagctcgga
ttaccatttggagagatgagcaaagtcctactgctcaaacagaaaaatcaggctttcctg
gaattcaatgacgaggggtctgcagccaacatggtgtcctactaccagaccacgccttcc
caagtccgcttgaaaccatgctatgtccagttctccaaccacaaggaactcagtatcaag
accgatgcttcacatgcataccagaacgctacagctcaggctgctttgcaggcagctcaa
gctgtgattcacgcccgcggcggcaacagtggtgccttcctcgaaacaaatgagtgtaat
cagacggtgctccgcgtgatcgttgacaacatcctgtaccccatcactctcgatgtgctc
cactctttattctctcgatttggaaaagttctcaagatcatcactttcaccaagaacaac
acctaccaggccttaattcagttttcagaccccatttcggctaaagcagctaaagattca
ctggatggtcagaatgtctacaatggctgtgacacactgaagatcgactactctcgattg
atgaatctcaatgtgaagtacaacaatgacaagagccgagactacacacgaccggagttg
cccacgggagaagtgacgttagaatccaccatgcagcaaagcatgctggattactttgct
cccgcctgtgctccgggggtgatggcctctccgttcgctgctgccatgccgggcttggga
ggtgcccccctaactgcctatggtgccccttcggcagccgcagccgctgcagcacatggg
tttggtggtctgcaaggtgtaaacccgttctccactgggatgccagcaatgactggattt
ggtccaattccaggagcgtacggcgctgcccgtttaggtatccccatccaagctcaagtc
ggcagtcccgtactccttgtctccaacctagatgagcagacggtcacgcccgatgctctc
tttaccctttttggagtgtatggggacgtacatcgggtgaagatcctctttaataagaag
gataacgcactcattcagatggcagaaccaagccaagcgcagttagcgatcacgttcctg
gacaaggtgaaggtgtgggggaagacaatccgggtggctcaatccaagcactccgtcgta
cagatgcccaaggagggacagcctgatgctggtctgacgaaggattacgtcaactcccct
ctccacaggttcaagagaccaggatccaagaactgtcagaacatattcccgccatctgca
gtgctacatttatccaacattccaaaagacacagaggaaggggaaatcactacaaagttc
gccgagcacggagctgttaaagcattcaagtttttcccgaaagacagaaagatggcctta
atccagatgggctctgtggatgaggcagtcatggctttaatagctatgcacaacttccag
atgggagaaaacagccacctgagagtgtccttctcaaaatccacaatttag
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