Haliotis rufescens (red abalone): 124118518
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Entry
124118518 CDS
T07893
Name
(RefSeq) pre-mRNA-processing factor 17-like
KO
K12816
pre-mRNA-processing factor 17
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124118518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124118518
Spliceosome [BR:
hrf03041
]
Complex C
Other components
Step II factors
124118518
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_DCAF4
WD40_RFWD3
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_SPT8
Beta-prop_TEP1_C
Beta-prop_SCAP
NBCH_WD40
Beta-prop_Vps41
PQQ_2
Motif
Other DBs
NCBI-GeneID:
124118518
NCBI-ProteinID:
XP_048239614
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAAILGLQEYGSDTNSSDGETKMDLEDFNMHLKPVNDKEKSYMAVCPNAAPAVAPKYDGN
SRLLDINVKEVKHNLKYEDMYAPQVGPLHPFKTRQFQSNRNMLSGYTEPAHVSDFQFENQ
RRTFTSYGYALDPSNDQTEVDKVVGDNTAAEDNKGITVFEVKPSAGEKRKKEKNRDPADI
DGYLGPWAKYADEQTVIKPSEEEQKELDEILAKRSKHSKQVEEKPMEEKTTLHIKDAYDY
QGRSFLHAPQDVGVNLRSEEPPEKCFLPKKLIHTWSGHSKGVAAIRWYPHTAHLMLSAGM
DTKIKIWEVYNERRCVRTYAGHKQAVRDITFNNDGKEFLSCGYDRYCKLWDTETGQCKSH
FTSRKVPYCIKFNPDEDKQHLFVAGTSDKKIVCWDIRSGEVVQEYDRHLGAVNSITFVDQ
NRRFVTTSDDKSLRVWEWDIPVDFKYIADPSMHSMPSVTLSPNGKWLACQSMDNKICVFN
VLNRFKFMRKKTFTGHMVAGYACSIDFSPDMSYIISGDADGKLYIWDWKSTKLYNKWKAH
DDVCIGVLWHPHETSKVATCGWDGVIKYWD
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaatattaggcttgcaggagtatggaagtgatacaaattcgtctgatggcgaa
actaaaatggacctagaagattttaacatgcatttgaaacccgtaaatgataaagaaaag
tcttatatggccgtgtgcccaaatgctgctccagctgttgcgcctaagtatgatggaaac
agcaggctactggacatcaatgttaaagaagtcaagcacaacctcaaatatgaagacatg
tatgcaccccaggttggcccacttcacccatttaagacgcggcagtttcaatccaatcgg
aacatgttgtcaggttatacagaacctgctcatgtcagtgactttcagtttgaaaatcag
cgcagaacattcacaagttacggttatgcccttgatcccagtaatgaccagactgaagtt
gacaaggtcgttggggacaacacagctgcagaggataacaagggcattacagtatttgaa
gtaaaaccaagtgctggtgaaaaacgaaaaaaagaaaagaatagagacccagcagatatt
gatggctacctaggaccctgggcaaagtatgcagatgaacagactgttatcaaaccaagt
gaggaggagcagaaggagctggatgagatcctcgccaagagaagcaagcacagcaagcag
gtggaggagaagcccatggaggagaagaccactctacacattaaagatgcatatgactac
caaggccggtcattcctccatgcaccacaagatgtgggggtcaacttgcggtcagaggag
ccaccggaaaaatgcttcttgccaaagaagttgattcacacatggtcagggcacagtaag
ggtgtagcagccatcagatggtacccccatactgctcaccttatgttgtctgctggcatg
gacaccaaaatcaaaatttgggaggtttacaacgagcgtcggtgtgtgcgaacatatgca
ggccataaacaggccgtgagagacatcaccttcaacaatgatggcaaggagttcctcagc
tgtggttatgacagatattgcaagctgtgggacacagagacaggtcagtgcaagtctcac
tttaccagccggaaggtgccctactgcatcaagtttaaccctgatgaggacaagcaacat
ctgtttgtggctggcacttcggataagaagatcgtctgttgggacatcaggtcaggagag
gtggtgcaggagtatgatcgccatcttggagctgtgaacagcatcacatttgttgaccag
aaccgtagatttgtaacaacttctgatgacaaaagtttaagagtttgggagtgggacatt
ccagtggatttcaagtacattgcagacccgtccatgcactctatgccatctgtcactctc
tctcccaacggaaagtggttggcttgtcagtctatggataacaagatttgtgtgttcaat
gtcctcaaccgcttcaagttcatgcggaagaaaacatttactggtcatatggttgctggc
tatgcgtgttccattgacttctctcctgatatgagctacattatctcgggcgacgcagac
ggcaagctgtacatctgggattggaagagcacgaagctgtacaacaagtggaaggcacac
gatgatgtgtgtatcggggtgctatggcatccccatgagacctccaaggtggccacctgt
ggctgggacggggttatcaagtactgggactga
DBGET
integrated database retrieval system
