Haliotis rufescens (red abalone): 124119021
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Entry
124119021 CDS
T07893
Name
(RefSeq) pre-mRNA-processing factor 39-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124119021
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
124119021
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_PRP39_C
HAT_PRP39_N
Suf
TPR_14
HAT_Syf1_CNRKL1_N
NRDE-2
PPTA
TPR_19
SBP_bac_5
zf-C2H2_12
TPR_15
HAT
Motif
Other DBs
NCBI-GeneID:
124119021
NCBI-ProteinID:
XP_046337355
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSEDMGKPEMEPAPPSEELKKQADDNQVGVSETAMVTEAKTDVVEKAEKTEKESELDKYW
KAVKENPNDFTGWTYLLQFVEQEKSSFNAVEGVAPKNVQNNLQAAEEAYDAFFSHYPYCY
GYWKKYSDMEKKFTDVDRALAVFERGVKAIPLSVELWLHYLNFYITEFGSHEDGEEKIRK
LYERSITAAGTDFRSDKLWDSYISWENMRLNKKLVTQLYKRLLSIPTQLYSHHYDNFKKH
IMENHPKDILSLDEFLKLRQEVVKASVVKVEDEEAGSEAPPGEDAPPGVEAPPGVEAVGG
MADEDEAKRLRERILENQETVHRLNEDEVSKRWTYEEAIRRPYFHVKPLERAQLKNWREY
LDYEIENGSHERVVVLFERCMIACALYEDFWMKYAKYLEQHNVDGVRSVYQRACTIHLLK
KPYIHLSWAAFEERQGNYPEASDVLSNIEKNVPNLVMVSMRRISLERRQGNHENVENLYQ
SYITKAATPAIRSFYSIKFARYLRKIRGNVEKAREVLAEALEKDKKNEKLFLQLLDLEYQ
TQPIEEQRVLDVFSNALKSDLSADFKVKVSQKRMEFLEDFGTCIQRITDAYDEHQKLVKD
HNSDRKKKHPDAIDDNHAPPEKKHKHDKYKSETNGSSATGDASSHHSSADTNTYNYHWPN
YSSSYPAYHSHYGAYGSYGSYYPS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagatatgggtaaaccagaaatggagccagctccaccgagtgaggaactcaag
aaacaggctgatgataatcaagttggtgtttcagaaacagcaatggtgacagaggctaaa
actgacgtagtagagaaggcagagaaaacggagaaagagtctgagctggacaagtattgg
aaggcagtgaaggagaatcccaatgactttactggttggacatacctgctgcagtttgtt
gagcaagagaaatccagctttaatgcagttgagggtgtggcacccaaaaatgtgcagaac
aacttacaagctgcagaggaggcttatgatgcattcttcagtcactatccttattgctat
ggttactggaagaaatacagcgatatggagaagaaatttactgacgttgaccgagctttg
gcggtgtttgagcgtggagttaaggcgatcccgttaagcgttgagctgtggctgcattac
ctcaacttctacatcactgagtttgggtctcatgaagatggggaggagaagatacggaaa
ctgtatgagaggtcaatcacggcagctggcacagacttccgctccgacaaactatgggac
tcctatatatcgtgggaaaacatgcgactcaacaagaagctggtgacacagttgtacaag
cgattgttatcaattcccacacagctgtacagccatcactatgacaatttcaagaagcac
ataatggagaaccacccgaaggatatactgagtctggatgagttcttgaagctgcggcaa
gaggtggttaaggccagcgttgttaaggtcgaagacgaggaggcaggctctgaggcccca
cctggggaggatgctccccctggggtggaggcaccacctggggtagaagctgttgggggg
atggctgatgaagatgaagccaagaggttgcgggagcggatcttggaaaaccaagagaca
gtccacagactgaatgaggatgaagtcagcaaaagatggacttatgaggaggctattcgt
cgcccatatttccatgtgaaacctcttgaaagagctcagctgaaaaactggcgagaatac
ttggactatgagatagaaaatggatcccatgaacgagtggttgtgctgtttgagagatgt
atgatcgcatgtgcactttatgaagacttctggatgaaatacgccaaatacctagaacag
cacaatgtagacggcgtgaggagcgtgtaccagcgagcctgtacaatccacttgctgaag
aagccgtacattcacctatcttgggcagcgtttgaggagagacaaggaaattatccagag
gcaagtgatgtcctgtcaaacattgagaaaaatgtgccaaatcttgtaatggtgtctatg
cggcgtatcagtctggagcgtcgccagggcaaccatgaaaatgtggagaacttgtaccaa
tcctacatcactaaagcagcaacaccagctatcagatctttctactcaatcaaatttgca
cgctatctcaggaagattaggggtaatgtagaaaaagcaagagaagtcttggcagaagct
ttggaaaaagataagaagaatgagaagttgttcttacagcttcttgaccttgagtatcag
acacaacccattgaagagcagcgtgtcttggatgtgtttagcaacgctctcaagagtgac
ctgtctgcagattttaaggtgaaggtttcacagaagagaatggagttccttgaagacttt
ggcacctgtattcagagaataactgatgcatatgatgaacatcaaaagcttgtgaaagac
cataacagtgatagaaagaagaagcacccggatgccatagatgataatcacgcacctccg
gagaagaagcataaacatgataaatacaagtctgaaacaaacggcagcagtgcaacggga
gatgcttcaagtcatcattcatctgcagacaccaacacctacaactaccattggcccaac
tattcaagttcataccccgcctaccactctcactacggagcatatggatcatacggctcc
tactacccatcgtag
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