Haliotis rufescens (red abalone): 124119323
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Entry
124119323 CDS
T07893
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124119323
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
124119323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_19
TPR_8
TPR_14
TPR_12
TPR_16
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_11
TPR_6
TPR_7
ARM_TT21_5th
ARM_TT21_4th
TPR_Slam
ARM_TT21_N
ANAPC3
PknG_TPR
DUF7017
NatA_aux_su
SNAP
TPR_21
Peptidase_S41_N
Fis1_TPR_C
Motif
Other DBs
NCBI-GeneID:
124119323
NCBI-ProteinID:
XP_046337764
LinkDB
All DBs
Position
Unknown
AA seq
1230 aa
AA seq
DB search
MASGSIEIPLRDTDEVIELDLDQLPEGDEVLSILRQEMAPLHLWVTLALEYYKQTYVEDF
VKILEASRTDASLDYQNFERDQMRALDTLAAYYVQMAHREKNKDDKRELFTKATLLYTTA
DKIIMYDQNHLLGRAYFCLLEGDKMDQADAQFNFVLNQSSNNIPSLLGKACIAFNKKDYR
GSLAYYKKALRTNPNCPASVRLGMGHCFVKLTRLEKARMAFERALMLDANCVGALVGLAI
LELNAKTQDSIKNGVQLLSKAYTIDSTNPMVLNHLANHFFYKKDYQKVQHLALHAFHNTE
NEAMRAESCYQLARAFHVQGDYDQAFQYYYQSTQFSPGNFVLPFFGLGQMYIYRGDNDNA
SQCFEKVLKAQPGNYETMKILGSLYANSPESERRDTAKQHLKKVTEQFPDDVEAWIELAQ
ILEQSDVQGALSAYGTATRILKEKVQADVPPEILNNVAALHFRLGNYQEAKKYYEASLER
SRNEAQHDETYYSAISVTTTYNLARLYEALNEYDKADKLYRNILREHPNYVDCYLRLGCM
ARDRGQIYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILQRPGTKDD
AYSLIALGNVWLQTLHQPMRDKDKEKRHQDRALAMYKQVMRNDSRNIWAANGIGCVLAHK
GCINESRDVFAQVREATADFCDVWLNIAHIYVEQKQYVAAVQMYENALKKFFKHHNVEVM
VYLARAYFKCGKLAECKQVLLKARHVAPHDTVLLFNISLVQQRLATQILKDEKSNLKTVL
SAVRDLELAHRYFSYLGQFGDRMKFDLNQAAAEARQCSDLLSQAQYHVARARKIDEEERD
LRKKQEEDREALRLRQRQEEDEKQRMREEVERRLFEQRAVFVEKAKKIAKEPEMEEKPKK
SGGRKSKRNYDGDIISDGSEDEMPRKKKKKRHASSGSEGEEDQENRRKKKNKRRSKHNRD
TDDSGDEGGKKERKPRKRKQRDPKESKRKDKKKRVDEDEDGLTAKQRRKIVSKAIISSSE
GSDSDGGKKLQIDDSGSGSGGGGGKRRRILSDSDSGGGRKSGSGSDRSRSRSRSRSGSRS
RSGSGSRSRSRSRSGSRSGSGSRSRSRSRSKSGSRSRSGSRSRSGSRSRSGSRSRSGSRS
RSRSGSRSRSRSGSRSRSRSKSGSRSRSGSRSRSGSRSRSRSRSRSGSRSGSGSEKGSRR
GSGDERSVKSGGESGNESRGNKSGSGNESN
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccgggtcgatcgagatccccttgcgggatacggatgaggtgatcgagttggac
ttggatcaactaccagaaggagatgaggttctcagtattctccgccaggaaatggcgcca
cttcatctctgggttacattggctcttgaatactacaaacagacatatgttgaggatttt
gtcaagattttggaggcttcacgtactgatgctagtctggactatcagaactttgagcgt
gatcagatgcgagcacttgacacccttgctgcatattatgtacagatggctcatagagag
aaaaacaaagatgacaagagagaattgttcaccaaagccactctgctgtacacaacagct
gataaaatcattatgtacgaccagaaccacttgctgggccgagcctacttctgtctgttg
gagggggacaagatggaccaggctgatgcacagtttaactttgtgctgaaccagtcaagt
aacaatatcccctcactgctgggcaaagcctgcattgccttcaacaagaaagactatcga
ggttccctggcatattacaagaaagccctgagaacaaaccccaactgccctgcctcagtc
agactaggcatggggcactgcttcgtcaaacttaccaggctggaaaaagcaaggatggct
tttgaacgggccttgatgcttgacgccaactgtgtaggtgcgttggttggcctggctatc
ctggaactgaatgccaaaacccaggattcaatcaagaatggtgtacagctgctctcaaag
gcctacaccattgattccactaaccccatggtcctcaaccatcttgccaaccatttcttc
tacaagaaggattaccagaaggttcagcacctggccctgcatgccttccacaacacagag
aacgaggccatgagagctgagagttgttaccagctggccagagccttccatgtacagggc
gactatgaccaggccttccagtactattaccagtctacacagttctcacccggcaacttt
gtgcttcccttctttggacttggtcagatgtacatctacagaggagataatgacaatgcc
tcccagtgttttgagaaggtgctgaaggctcagcccggcaactatgagacgatgaagatc
cttgggtcactgtatgccaactccccagagtctgaacgcagagacacagcaaaacaacac
ttgaagaaggtgactgaacagttcccggatgatgtcgaggcctggattgagctggcacag
attctggaacagtccgacgtacagggtgcattgtcagcatatggaacagcaacacgtatc
ctgaaggagaaagttcaggccgatgtacctcctgagatcctcaacaatgttgctgccctc
cacttcaggctcggcaactaccaagaggccaagaagtattatgaagcatcattagagaga
tctcggaacgaggctcaacatgatgaaacctactacagcgccatctccgtgacaaccaca
tacaacctggcacgactgtacgaggcgctgaatgagtatgataaagcggacaaactctac
aggaacatcctcagggagcatcctaactatgtagactgttatctgcgactgggctgtatg
gctcgagacagaggtcagatctatgaggcatcagattggttcaaggaagctttacagatt
aatcaggatcatcctgatgcgtggtcgctgatcggcaacctccatttggctaaacaagag
tgggggcctggacagaagaagtttgagcgtatcctgcaacggcctggtacgaaggatgat
gcctactccctgattgccctcggcaacgtgtggctgcagactcttcatcaaccaatgaga
gataaggacaaggaaaagcgtcaccaggaccgagccctcgccatgtacaagcaggtcatg
aggaatgattctcgcaacatctgggctgctaatggcattggctgtgtgctggcacacaag
ggctgtatcaacgagtctcgggatgtgttcgctcaggtccgcgaggccacggccgacttc
tgtgacgtgtggcttaacatcgctcacatctatgtggagcagaagcagtatgtggccgca
gtgcagatgtacgagaatgcactgaaaaagttcttcaaacaccacaatgtagaagtgatg
gtgtaccttgcccgagcctacttcaagtgtgggaaactggcagaatgtaaacaggtgctc
ttgaaggctcgccatgtggctccccacgacacagtcttactgttcaacatctccctggtg
caacagaggctggcaacacagatcctcaaggatgagaagagcaacctcaagactgtactc
agtgctgtccgtgacctggagctggctcacagatatttcagctaccttggtcagttcgga
gacaggatgaagttcgatttgaaccaggctgctgctgaggccagacaatgctctgatctg
ctgagtcaggctcagtaccatgtggcccgggcgaggaagattgatgaggaagagagagac
ttgaggaaaaagcaggaggaagaccgagaggcccttagactccgacagaggcaggaggag
gatgagaagcagcggatgcgtgaggaggtggagcgtcgcctgtttgaacagagagctgtg
tttgtggagaaggcaaagaagattgctaaagaaccagagatggaagaaaaaccaaagaaa
agcggaggcaggaaatcaaagaggaattatgatggagacatcatctcggatggaagtgag
gatgaaatgccccgcaagaagaagaagaagcgacatgctagcagtggctcggagggagaa
gaggaccaggagaataggaggaagaagaagaacaagagaagatccaaacacaacagagac
actgatgattctggtgatgagggaggcaagaaggaacgcaagccaaggaagaggaagcaa
agagatcccaaggagtccaagaggaaggacaagaagaagagggtggatgaagatgaagat
gggttgacagccaaacagaggaggaagattgtctcaaaggccataatctcctcaagtgaa
ggctctgattctgatgggggcaagaaactccagatcgatgacagtggcagtggtagtggt
ggtggtggtggaaagagaagacgcattctttctgacagtgacagtggtggaggacgcaag
tcaggatctggatccgataggtccaggtccaggtccagatcaagatctggctctaggtca
aggtcaggttctggatcaaggtcacgatcacggtcacgttcgggttccaggtcaggctct
ggttcacgatcaaggtcacgttctcgctctaagtctgggtcaagatcacggtctggatcc
agatcgcgatcaggatctaggtcaagatcagggtctaggtcacgatctgggtcgagatct
agatcgagatctgggtcgagatctagatcaagatctggttcaaggtcacgatcacgctca
aaatcaggatctaggtcacgatctggatccagatctagatcaggctcaaggtcacgttcg
agatcaagatcaaggtctggctctaggtctggctcaggatcagagaagggttcaagaaga
gggagcggtgatgaaaggagtgtcaagtccgggggagaatctgggaatgagtcccgaggg
aacaagtctggcagtggcaatgagagcaactga
DBGET
integrated database retrieval system
