Haliotis rufescens (red abalone): 124119930
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Entry
124119930 CDS
T07893
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56-like
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124119930
Enzymes [BR:
hrf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124119930
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124119930
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4
zf-B_box
zf-RING_UBOX
zf-C3HC4_2
FYVE
zf-RING_5
zf-C3HC4_4
SIKE
ANCHR-like_BBOX
DUF7118
Motif
Other DBs
NCBI-GeneID:
124119930
NCBI-ProteinID:
XP_046338561
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MTSTSSSGEIMVPQEDVTCRLCKQPFVTPKLLTCLHSFCQLCIEERLTTEGGEHVFQCPL
CKHQTRLQTKSASSLTTNFYVLGCQRVYACRTSKASGCVVCSMKGDFSDSTHHCLDCGDK
LCETCSKGHNSSTLTATHRVVSLDEIRQGQYDKHLFKKEEQMCAKHCEGLNIFCHTCSEA
LCVQCAFAEHTKHQFDTVEEAAEKRRQSMKQALTMVVATSSNIQTSANKLQAEIDQLNKE
EEIFVSDLTSSVEAVMEKIRKKSSEVLEKGRRSFEDERMKRQRMLELMNSESERREEIVR
VCRQVEEGGGLTLLLLFQTLQQGLKEFAKAVNSVSWRGDLTTYKVKINLPLDTEFITFRE
VRMVDDVPGFHAGPELTPQSSKPELLNETTKMQATHSTSSSTQQDRTTVTTAKDEGNGEV
VGAKDSSASTEFLEINLHEIDATAGGVLPYKRQFSTKVSTDKSQARISSMALKSEGRLLV
LDESNAKLKDFHEDGKLIILVNQDGKCDLFKQFVCVDNDNICAIYENLLVILTKHLQVVS
KTPLLPKGEMTCGPIVANFGKHILIGNLPNKEMRVMTTTGKVVRSWTSQVKGAMESFRYV
ADDIVIVCSWRGKGSVCLESEKGGPFLRINGHKRNGMKWRPSDAIFGANGRIIASDMHRN
EILIFAPEGRALCVVDTMQNSVSEPRCVILDKGGKVYVSFKGGMVAVYKIA
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcgacatcatcatccggagaaataatggtacctcaagaagacgtaacctgcagg
ctgtgcaaacagcctttcgtcaccccaaaacttctgacgtgtctccattcgttctgccag
ctttgtattgaagaacgtcttacaaccgagggcggagaacatgtcttccaatgtcctctg
tgcaagcatcaaacacgattacagacgaaatcagcgagctctctaacaacaaacttctat
gtactcgggtgtcaaagggtgtatgcttgtcgcacgtcaaaagcatcaggctgcgtggtt
tgttcaatgaaaggcgacttttctgattcaactcaccattgcctggattgtggcgacaaa
ctttgtgaaacatgctccaagggacataactcttcaactcttactgcaacacatcgagtt
gtctcccttgatgagatcaggcaaggtcagtatgataaacacctttttaaaaaagaggag
cagatgtgcgcaaaacattgcgaaggattgaacattttctgccatacgtgttctgaagca
ctctgtgtgcagtgtgcttttgctgaacacacgaaacaccagtttgacactgtagaggaa
gcagctgaaaagagacgtcagtccatgaagcaggcactgacaatggtggtagccacgtct
tccaatatccagacctctgccaacaaactacaagcagagatagatcagttgaacaaagag
gaagagatatttgtaagtgacctgacttcatcagttgaggcagtgatggagaagatcagg
aagaagagctctgaggtgttggagaagggcaggagaagttttgaggacgagaggatgaag
agacaaaggatgctggagttgatgaattctgagtctgaaaggagggaggagattgtcaga
gtgtgtcgacaggtggaagagggtggtgggttgacgcttctactgcttttccaaacactc
cagcaagggttgaaagaatttgcaaaggcagttaacagtgtgtcatggaggggggatctg
accacatacaaggtgaaaataaaccttccgcttgacacagaatttattacttttcgagaa
gtacgaatggtcgacgatgtgccaggtttccatgcaggtcctgagcttaccccccagtct
tccaagcccgaattgctcaatgaaacaacgaaaatgcaagccacacattccacaagttct
agcacacaacaagaccggacaactgtcacaacagccaaagatgaggggaatggtgaagtt
gtgggagcgaaagattcgtcagcgtcaacagaattcctggagataaacctgcacgagata
gatgcaacagctggaggggttttaccatacaagcgtcagttcagcacaaaagtcagtact
gataaatcacaagctagaataagttccatggctcttaaaagtgagggtagacttttggtt
ttggacgaatcaaatgcaaaactgaaagatttccatgaagatggtaaacttattatctta
gtgaatcaggatggaaaatgtgatcttttcaagcagtttgtgtgtgttgataatgacaac
atttgtgctatctatgaaaacctccttgttatattaacaaagcatttgcaggttgtgtcg
aaaacacccttgcttccaaaaggagaaatgacctgtggtcccattgtcgctaactttggg
aagcacatccttatcggtaatctgccaaacaaggagatgcgggtcatgacgacaacaggg
aaggtggtcagaagttggacgagtcaggtcaagggcgcgatggaatcctttcgctacgta
gcagatgatatagtgatcgtgtgctcttggcgagggaaagggtctgtgtgtctcgagtca
gagaagggcggccctttcctcaggatcaacggacacaaacggaatggcatgaaatggcgg
ccgtcggacgccatctttggtgcaaatggacgtatcatagcgtctgatatgcacaggaat
gagatcctgattttcgcccctgagggtagagctctgtgtgtagttgatacaatgcagaac
agtgtgtctgaaccgcgttgtgtgattttggataagggtggcaaagtgtatgtttccttc
aaaggtggcatggttgctgtttacaaaatagcgtga
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integrated database retrieval system
