Haliotis rufescens (red abalone): 124120075
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Entry
124120075 CDS
T07893
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1-like isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrf03036
]
124120075
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124120075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
LIG3_BRCT
ResIII
BRCT
BRCT_2
DEAD
SLFN-g3_helicase
RuvB_N
AAA_22
SWI2_SNF2
DUF5448
Motif
Other DBs
NCBI-GeneID:
124120075
NCBI-ProteinID:
XP_048241979
LinkDB
All DBs
Position
Unknown
AA seq
1018 aa
AA seq
DB search
MSLRDIPDAIDSVESLQELGWGDLALRPYQLEGVNWLINCCQQGHGCILGDEMGLGKTCQ
TIALLTYLNGNQPTTSRPHLVVCPRSVLENWGVEFSRFSPKTKTLCFVGDKDVRNALSKK
IKASKKEKGTYEFDALITTYELCLKDHLFLKTIPWNVLVVDEAHRLKNQDSLLYKTLEEW
DISCSVLLTGTPVQNNLRELYALLSFIAPRMFRMSKVDKFVETYSNTEKEEGLEELHELL
KPYLLRRTKNNVLADLPNKTEVVLYHGLSGLQKKLYKGILTRDLEAFNSTAVQPRLMNIL
MQLRKCVNHPYLFDGVEPEPFELGEHLVEASGKLVLIDKLLCHLKQSGHKVLLFSQMTHM
LDILQDYLGYRDFTYERLDGSVRGEERFLSVRNFNENDETFVFLLSTKAGGQGINLTAAD
TVIFVDSDFNPQNDLQAAARAHRIGQTRPVKVIRLIGRNSVEEIILARAEQKLKLTDKVI
ESGQFTAGGKHVLFADNRQQLQDVLRFGVDKLLNADEDDSSDMDLEKYLGISIDGEWQLE
EEVEEEEAPQTGEDKMDEDAPQSMYVFEGTDYSKDTTVADRKALEELLEVERIVQSDVAS
GERTLRVKKEKSLVGPLPDLQRKPRKQLTPQELEEHKRRRKEAAEKRAKLAEEQEIRRAQ
EQRKKREDLWKANNYTSCNVASDSEEEDSQEEHGEEEEEENGRQRAIQYVSGDVTHPSDA
GTLNNIIVHCADDAGQWGRGGLFSALSARSPNPEAQYQLAGRMKDLALGDCHLVCLDNDT
EDCHEWLALLIAQHRDKRNNLSGIKLSALRVGLEKIHSVAKKHKASVHLPRIGHNTPGFN
WYGTERLIQKHLASTGIPTFIYYFPRRQKLKRKVPPPASPPSSPPVSPLSSPSTIPSMSA
PGERPLKFLKRLSSGGTSARSSSPLPSYFMGCSIHLHHIPDDDSKYYRRYIVAFDGDVHA
AVSPSTTHVVISQGADREILKGAVCANPDVVIVTSQWMADCLNMGRLLETDTYQILLE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaagggatatacctgacgcaatagattcagttgaatcacttcaagaactagga
tggggtgacctcgctctgcgcccataccagctggagggggtgaactggctgattaactgc
tgccagcaaggtcatggctgtattctgggggatgagatgggccttggaaagacttgccag
actattgcactgcttacatacctgaatggcaaccagcctaccacctcccgtccccaccta
gtggtgtgtcctcgctcagtcctggagaactggggggtagagttcagcagattttccccc
aaaactaaaactctgtgttttgttggagacaaagatgtgagaaatgctctgtcaaagaaa
ataaaggcatccaaaaaagaaaaaggaacatatgaatttgatgctctaataacaacatat
gagctgtgcctgaaggatcacctgtttctcaagaccatcccctggaatgtgctggtggta
gacgaggctcaccgactcaagaaccaggattctctgctgtacaagactctggaggagtgg
gatatctcctgcagtgtgctgctcaccggaacgcctgtacagaacaacctcagagagctg
tatgccctgctcagcttcatagccccaaggatgttccggatgtctaaggtggacaagttt
gtagaaacatacagcaacacagagaaggaagaaggccttgaggagctgcatgagttgctg
aaaccctatctgctgaggcgcaccaagaacaatgttctggcagacctgcccaacaagaca
gaggtggttctgtaccatggactgtccggtcttcagaagaagctgtacaagggcatcctc
accagggacctagaagccttcaacagcactgcagtacagccccgcctcatgaacatcctg
atgcagttgaggaagtgtgtcaaccacccgtacctgtttgatggtgtggagccggagcca
tttgagctgggtgagcacctggtggaggcaagtgggaagctggtgctgatagacaagctg
ctgtgccacctgaagcagtctggacataaggtgctcctgttctcccagatgacacacatg
ctggacatccttcaggactacctggggtatagagattttacatatgaacgtctggatggg
tcagtccgaggggaagaaaggtttctctctgtccgtaatttcaatgagaacgatgaaacc
tttgtctttcttctcagcacaaaagcaggtggtcaagggatcaacctgactgctgctgat
acggttatctttgtggacagtgacttcaacccgcagaacgacctccaagctgctgccaga
gctcacaggattggacagacaaggccagtgaaggtgatccgactgatcgggcgcaactcg
gtggaggagattattctggccagagctgagcagaagctgaaactgaccgacaaggtgata
gagagtggtcagttcactgctggcgggaagcatgtactgtttgcagacaacagacaacag
cttcaagatgtcctgaggtttggtgtagacaagctgctgaatgctgatgaggatgacagc
agtgacatggacctggagaagtacttgggaatcagcatcgatggggagtggcagctggaa
gaggaggtggaggaggaggaggcgccccagacaggggaggacaagatggatgaagatgct
ccgcagagcatgtacgtgtttgaaggcacggactactctaaggacaccactgttgctgac
agaaaggctttggaagaactacttgaagtggagcgcattgtgcagtctgacgttgcatca
ggggagagaactctacgtgtcaagaaggagaagagccttgtgggcccactgcctgatctc
cagcgcaaaccccgcaaacagctgaccccccaggagctggaggagcacaagaggaggagg
aaggaagcggcagagaagcgtgcaaagctagccgaggaacaagagatacgacgagctcag
gagcagcgcaagaagagagaagacctgtggaaggccaacaactatacgtcatgtaatgta
gcatctgacagtgaggaagaagactcccaggaggaacatggggaggaagaggaggaggag
aacggcagacaacgtgctatacaatatgtgagtggggatgtcacccaccctagtgatgct
ggcaccctcaacaacatcattgtccactgtgcagatgacgctggtcagtggggacgggga
ggcctgttctcagccctgtcagccaggtcacccaacccagaggcccagtaccagctggct
ggcaggatgaaagatctggccctgggagactgtcacctggtatgtctggacaacgataca
gaggactgccatgagtggcttgctctgctgatagcccagcacagagacaagaggaacaat
ctctccggcatcaaattgtcagcacttcgagttggattggagaagatccactcagtagcc
aagaaacataaagccagtgtccacctaccccgtattggccacaacactcctggcttcaac
tggtacggcaccgagagactcattcagaaacacctggcctctactggaatacccaccttt
atttattactttccccggagacagaagctgaagcggaaagttccacccccagccagtcca
ccatcgtcacccccagtcagtcctttgtcgtcaccctcaaccatcccgtccatgtcagca
cctggagaaagacctctcaaatttctgaagcgactgagtagtggagggacatcagcgcgc
agctcgtcaccgctgccgtcctacttcatgggctgctcaatccacctccatcacatccca
gatgatgacagcaagtactacagaagatacattgttgcatttgatggtgacgtccatgcc
gcagtcagcccatccacaacacatgtggtcatctcacagggagcagacagagagatttta
aagggagctgtatgtgcgaaccccgatgtagtgattgtgacgagtcagtggatggcggac
tgtctcaacatggggagactgctcgagaccgatacataccagatactactggagtaa
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