Haliotis rufescens (red abalone): 124120554
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Entry
124120554 CDS
T07893
Name
(RefSeq) ATP-dependent RNA helicase DDX3Y-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124120554
03041 Spliceosome [BR:
hrf03041
]
124120554
03036 Chromosome and associated proteins [BR:
hrf03036
]
124120554
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124120554
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
124120554
mRNA cycle factors
Common to processing body (P body) and stress granule
124120554
Spliceosome [BR:
hrf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
124120554
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124120554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
124120554
NCBI-ProteinID:
XP_046339368
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MNPNDTHQNGKGLEQQFAGLDLNGASRGRGRGDWTAQAFPAGPPNNGQFRPNNRYPPEQI
VFYGQGAAPQAGRYVPPHMRGGPQGIMTPQVPPPMPPPQPQQQRGWGGGREYGQQGGDGR
DGSYRGGYNSSPGGYRGGYSAPMPGPQGIPDQGGYNTFNRGGRQGASFSNFNNRRGSGGN
FQRNDRPDNRWGGEQYDRQGSLPPQPVGSSRWDALAEDRTPRKREWGHNKWDNRTDGDAW
AGRNGNQDIRNEDWSIPLPKNERLEQELFGSSSTGINFEKYDDIPVDASGENLPRAADSF
EDCELGEIIRNNIALSKYTKPTPVQKYSIPIVLGHRDLMACAQTGSGKTAAFLVPILNQI
YDKGPGQVPQQQQRQYGKRTKQYPIALVLAPTRELASQIYDEARKFAYRSRVRPCVVYGG
ADIGAQMRDLDRGCHMLVATPGRLVDMVERGKIGLDYCKFLVLDEADRMLDMGFEPQIRL
IVEKNGMPASGERQTLMFSATFPKEIQILARDFLENYVFLAVGRVGSTSENITQKVVWVE
ENEKRSFLLDLINASGMFTTGPESLTLTFVETKKGADALEEFLQKEGYPATSIHGDRSQR
EREDALKVFRSGDRPILVATAVAARGLDIPNVRHVINFDLPSDIEEYVHRIGRTGRVGNL
GLATSFFNEKNKNIIRDLLDLLVEANQEVPTWLESMAHEARSSGGTSRRGGGRRYGSGGF
GARDYRQQSKQGKSGGFATPGFQQQGFNHYNQYNQYSNYGGAYNQQPAANDWWGN
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaatcccaatgatacccatcaaaatggaaagggtctagagcagcagtttgctgggcta
gacttgaacggcgccagccgaggccgtggtcgcggtgattggactgcccaggctttccca
gctgggccacctaacaatggccaattccgaccaaacaaccgatatccgcctgagcaaatc
gtattctacgggcaaggtgccgctcctcaggcagggcgctatgtcccccctcacatgcga
ggaggaccccaagggataatgactccccaggtccccccaccaatgccacccccacaacca
caacagcagagaggttggggtggtgggcgagaatacggtcagcaggggggtgatggaaga
gacggtagctatcgtggaggttacaacagcagtccgggaggttaccgcggaggttacagt
gctcccatgcctgggcctcagggaattccagaccagggtggctacaacaccttcaaccga
ggcgggagacagggcgccagcttcagcaacttcaataaccgacgaggaagtggtggaaac
ttccaaagaaatgacagacccgacaacagatggggtggagaacagtatgaccggcagggg
agtcttcccccacagcctgtgggaagcagccgatgggacgccctggccgaggaccgcacc
ccacgtaaacgagagtggggccacaacaagtgggacaacagaactgacggcgacgcatgg
gccggccgtaatgggaaccaggatatccgcaacgaagactggtctatccctttgccgaaa
aatgaacgacttgaacaggagctatttggatcaagcagcactggcatcaactttgagaaa
tatgatgatattcctgttgatgctagtggagagaaccttcccagagctgctgacagtttt
gaggactgtgaacttggtgagatcatcaggaacaatattgcactgagcaagtacactaag
ccaacccctgtgcagaagtactcaatcccaatcgtactaggccacagagatctgatggca
tgtgcccagacaggctctggcaaaactgctgctttccttgtgcccatcctcaaccagatc
tacgacaaaggacctggtcaagtccctcaacagcagcagcgacaatacggcaagcgtact
aagcagtaccccattgccttggttctcgcccccacaagagaactggcctctcagatctac
gatgaagccagaaagtttgcttacagatcccgagttcggccatgtgtggtgtatggaggt
gcggacattggcgcacagatgagagatctagatcgtggatgccacatgctcgtggcaacc
cctggccgtcttgtcgacatggtggagagaggcaagattgggcttgattactgcaagttc
ttggttcttgacgaagctgatcgtatgttggacatgggttttgagccccagattcgtctg
atagtggagaaaaatggcatgcctgcatccggagaacgacagaccctcatgttcagtgcc
accttccccaaggagatccagatcctagcccgtgatttcctggagaactacgtgttcttg
gctgtgggccgagttggcagtaccagtgagaacatcacgcagaaagtggtgtgggtggag
gagaacgagaagagatccttcctccttgatcttatcaatgcatcaggcatgttcactaca
ggtcccgagtccctcaccttgaccttcgtcgagaccaagaagggtgccgatgcactggag
gagttcctgcaaaaggagggttatcctgctaccagtatccatggcgaccggtcgcagcgc
gagagggaggatgcattgaaggtgttccgttcaggagacaggccgatcctagtagctact
gcggttgctgcaagaggtcttgatattcccaacgttcgtcacgtcatcaactttgatctg
ccaagtgacattgaagagtatgtccatagaattgggcgtactggacgtgtcggcaacctt
ggtcttgccacgtctttcttcaatgagaagaataagaacattatccgtgacctgctggac
ttgctagtggaagccaatcaggaggttccaacttggctcgagtccatggctcacgaggct
cgttcatctggcggaacaagcagacgtggcggtgggagacgctatggatctggaggattt
ggagctcgtgattaccgtcaacagagtaagcagggtaaatctgggggctttgcgacccct
gggttccagcagcaaggcttcaaccactacaaccagtacaaccagtacagcaactatgga
ggagcgtacaaccaacagccagctgctaacgactggtggggcaactaa
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integrated database retrieval system
