Haliotis rufescens (red abalone): 124120935
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Entry
124120935 CDS
T07893
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124120935
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_EGF
Laminin_N
LAMININ_IV_B
F5_F8_type_C
Laminin_II
DUF948
Motif
Other DBs
NCBI-GeneID:
124120935
NCBI-ProteinID:
XP_046339805
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MEFSLFYVTLCCIVLKDVVGQSQRQRHCEQGSCYPATGDLLIGRGKQLRATSTCGMVKPD
RYCVVSYLEKRTKCFQCDSREPWQSRVHENSHRIENIVSSFKDRRDRWWQAENGVENVSI
QLDLEAEFHFTHLIMTFKTFRPKSMFIERSYDFGKTWKVYRYFAQSCRKSFPGIPRGPVR
SMTDVICQTKYSAETPSTQGEVIFRVLPPFIPIKDPYSEQVQDLLKLTNLRINFTELHTL
GDTQLDSRPEIKDKYYYSLFDMTVRGSCSCYGHASRCLPVPGYDTYPNMVHGMCECTHNT
KGLNCEMCEEFYNDLPWQPARKNQPNACKKCNCNNHAAKCHFDPAVFEATGEVSGGICDN
CQHNTQGRNCQECKPFFFQDPNRDIRDPEICQPCDCDPAGSERNGECESHTDEVLGLEGG
RCRCKRHVRGSRCDQCVENYWNLQGDNPLGCDACSCNPLGTLGDYGCDQHTGLCLCKRYV
TGQNCDTCHRGFYGLSDGPYGCEACNCDIGGSLSESCDQQSGQCTCRPHIMGKHCKQVEP
GYFFAGLDYYIYEAEFGRGTGNARVYIREPIPGGPSYWTGPGYMRVMEGDSIEFTVTDIS
FPTYYDIVLRYDPRMPEMWEDVRVTVVRPDQVDPDGLCADFNPQEDIKSVTIEPGARYQL
VTPPSCLESGKMYTIRLDFQRYKQGQLTPDATMFIDSLILVPHTDAIPIYQIPGLHEYMK
NDFLRNRCRQLQFNSIQADMPDVCKGHIFSISAVLHNGAIDCDCDPTGSVSRECNPEGGR
CPCKPNVVGRRCDQCAPGTYGFGPNGCTACNCHNIGARDNFCNEQTGQCTCIQNAYGRAC
DSCRVGFWGFPQCRQCQCNGNADTCDNLDGRCISCRNFTDGQYCDRCMNGYYGDPRVGVR
IPCRPCLCPGGPGSENQHADTCTLDPRSSSVTCDCYPGYERPTCDRCSENYFGNPLSPGG
SCEQCMCNNNIDPDVAGSCDRESGECLKCLFNSEGFSCEHCTPGYYGDATTQDCKSCVCF
SLGTDADGGQCDRRNGQCPCLPNVVGLRCDQCAPGHYNLQSGKGCDACNCDPQGSLSTEC
TQLEGQCECRAGRGGQTCGDCEDFFWGDPLDQCFPCDCDPQGSTSMQCDRRTGQCVCEQG
VTGYKCDRCARGTTGDLPNCVPCGECFDNWDRIIRDLRDQTHSLVETGNNISVTGAIKAF
DDEFKHMQNNIDEIRRILSTANVTRVDVQDIQNMLDTIRRNLTESNKALNNVDRELSNTT
ARVQSGNNQIAILQRRVEDLKNLAEELRGNATDIQARDVEGAFNITREAERRSRDAQRKV
DETQRTVEDSKSTRQRVDALIDQRRDDFNNRLKENKASLDELDGKVSTLGGRLSNLNEQV
CGSQAAPCDNLCGGGGCGRCGGASCGAGAVTKANKALRYAQQAADILDSKQTEAYSKVTN
LESAKQDAEQAKADAKMAYDQALLAKNQSESAREDLEDLLHRVRQFFLEEAATPESIEKV
AQEVLAMSISLTPAQIEELADKINRTIQGLQNIDSILDDTRDDLAKAKRLKQRADDASGD
ASAIQKTAEDVLSALDGAKKAQEEAEREIITAENNIRDANDDLAMIESETTSAADTSNRS
MTILDRLKARLSDLRKKYNQNKFEVEEAEKASREATDLANQAERDANDLDNKYQSAAGRL
NNKFNMTSDANERATRLKKRADELAAGTQEKYQNLKRMQQDFEDNNKTLNELSDMIDELN
RRMQEYLDKIQEKSKYYRNC
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggagttttctctcttctacgtcacactatgttgtatagttttaaaagatgttgtgggt
cagtcccaacgacagcgtcattgcgaacaaggcagctgttacccagcaacaggagacctt
ctgattggtcgaggaaagcagctaagagcgacgtccacatgcgggatggtcaaaccggat
agatactgtgttgtgtcatatctagaaaagcggacaaagtgctttcagtgcgactctcgt
gagccatggcagtcgagagtacacgaaaacagccaccgtatcgagaacattgtctcatca
ttcaaagataggcgagatcggtggtggcaggcggaaaatggtgttgagaatgtttcaatt
cagttggatcttgaagcagagtttcattttacacacttgattatgacatttaaaacattc
aggccaaagtccatgtttatagaaaggtcatatgattttggtaaaacttggaaagtgtat
cgttattttgctcagagctgtcgcaaatccttccccggaattccaagaggaccagtgcgg
tcgatgactgatgttatttgtcagactaaatactcagcagaaacaccatcaactcaggga
gaggtaattttccgtgtgttgccaccattcattcccatcaaggacccgtacagcgaacag
gtgcaggatctgctcaaactcaccaacttgagaatcaacttcactgaactccacacatta
ggtgacacccagcttgacagccgtccagagatcaaggataagtactattactctttgttt
gacatgactgtcagaggtagctgctcgtgttatggccacgcctccagatgtctgccagtg
ccaggatatgacacatacccaaacatggtgcatggcatgtgcgagtgtactcacaacacc
aagggcctcaactgtgagatgtgtgaggagttctacaatgatctcccatggcaaccagct
aggaagaaccagccaaatgcttgcaagaaatgcaactgcaacaatcatgctgccaagtgt
cactttgatccagcggtgtttgaggctactggcgaagtgagtggcggcatctgtgacaac
tgccaacacaacacacagggccgcaattgtcaggagtgcaaacccttcttcttccaggac
ccaaacagagacatcagggacccagagatatgtcagccatgtgactgtgaccctgccggc
tcggagcggaatggcgagtgcgagagtcatacagatgaggtgcttggcctggaggggggc
cgatgtcggtgcaagcgccatgtgcgagggtccagatgtgaccagtgtgtagagaactac
tggaatctgcagggagacaacccacttggctgtgacgcctgctcgtgtaatcctctgggt
acacttggagactatgggtgtgaccagcacactggcctctgtctgtgtaagagatacgta
accggacagaactgtgacacttgccatcgcggcttctatggtctgagtgatggcccttat
ggatgtgaagcttgcaactgtgacataggtggctctctcagcgagtcatgtgaccagcag
tcaggacagtgcacctgtcggccgcacatcatgggcaaacactgcaagcaggtggagcca
ggctacttcttcgctggcttggattattacatctacgaggcggagtttggccgcggcacc
gggaatgcccgagtgtacatccgtgagccaatccctggtggtccatcgtactggaccggc
cctggttacatgagagtgatggagggagacagcatcgagttcaccgtcactgacatcagc
ttccccacctactacgacatcgtcctcagatacgaccctaggatgccggagatgtgggag
gatgttcgggtgacggtggtacgcccagatcaggtggatccagatggtctgtgtgctgac
ttcaaccctcaggaggacatcaaatctgtcaccattgaaccaggtgcacgctaccagctg
gtgacccctccatcctgcctggagagcggcaagatgtacaccatccgactggacttccag
cgttacaagcaaggccaactgacacccgatgccaccatgttcattgactctttgatcctg
gttccccacacggatgccatccccatctaccagatccctgggctccacgagtacatgaag
aacgacttcctgcgcaaccgatgtcgtcagctgcagttcaactccatccaggcagacatg
cccgacgtctgcaagggccatatcttcagcatctccgctgtgcttcacaatggagccatc
gactgcgactgtgaccccaccggctccgtaagtcgtgagtgtaaccccgagggaggtcgg
tgcccctgcaagcccaacgtggtcggcaggagatgtgaccagtgtgctcccggaacgtat
ggattcgggcccaacggctgtacagcttgcaactgccacaacatcggtgcccgggacaac
ttctgtaatgagcagaccgggcagtgtacgtgtatccagaacgcctacggacgtgcctgc
gacagttgccgcgtggggttctggggcttcccccagtgtcgacagtgtcagtgcaacggc
aacgccgacacctgtgacaaccttgacggacgctgtatttcatgcaggaacttcaccgat
ggacagtactgtgataggtgtatgaatggttactatggcgacccccgtgttggtgtgcgt
attccctgccgcccctgtctctgccccggtggaccaggttccgagaaccagcacgccgac
acctgcactctcgatccaaggagcagctctgtaacatgtgactgttaccctggatacgaa
agacccacgtgtgaccggtgttccgagaactattttggcaaccctctgtcacctggtggc
agttgtgagcagtgcatgtgcaacaacaacattgaccccgacgtcgcgggcagctgtgac
cgcgagagtggcgagtgcctcaagtgtctgttcaatagtgagggcttcagctgtgaacac
tgtacacctggctactatggtgatgccaccactcaagactgcaagagttgcgtttgcttc
tcactgggtacagacgctgatggtggtcagtgtgaccgtcgcaatggtcagtgcccctgt
ctgcctaacgtggtgggtctccgatgtgaccagtgtgccccgggccactacaacctgcag
agtgggaagggatgtgatgcctgcaactgtgacccccagggatctctctccactgagtgc
actcagctggaaggccagtgtgagtgtcgagccgggcgagggggacagacttgtggtgac
tgtgaggacttcttctggggagaccccctcgaccagtgcttcccatgtgactgcgacccc
cagggatctacctccatgcagtgtgaccgccgcaccggtcagtgtgtgtgcgaacagggt
gtcacaggctacaagtgcgaccgatgtgcccgtggaacaaccggagatctgcccaactgt
gtgccatgtggcgagtgcttcgacaactgggatagaatcatccgtgacctcagagaccag
actcacagcttggtggagacaggcaacaatatctcagtgacgggagccatcaaggcattt
gatgatgaattcaagcacatgcagaacaacattgacgagatccgtcgcatcctgtccaca
gccaacgtcacacgagtggacgtgcaggacatccagaacatgttggacacaatcaggcgt
aacttgaccgagagcaacaaggccctgaacaatgtcgacagggagctgagtaacacgaca
gctcgtgtacagagcgggaacaaccagatcgctatcttgcagcgccgcgtggaggacttg
aagaacctggctgaggagctgagaggaaacgccacagacattcaggcccgagatgtggag
ggtgccttcaacatcactcgtgaggctgagcgtcgttctcgtgatgcccagcggaaggtt
gatgaaacacagaggactgttgaggattcaaagagtaccaggcaacgggtggatgccctc
attgaccagagaagagatgacttcaacaaccgcctcaaagaaaacaaggcttcacttgat
gagctggatggcaaggtgtcaacattgggaggcaggctttctaatcttaatgagcaggtg
tgtggcagtcaagcagctccctgtgacaatctgtgtgggggtggcggctgtgggcgttgt
ggaggagccagctgtggagcaggtgcagtcaccaaggccaacaaggctctgcggtatgcc
cagcaagctgccgacatcttggactcgaagcaaacagaagcatacagcaaagtgaccaat
ctggagtctgccaagcaggatgcggagcaagctaaggcggacgccaagatggcgtatgac
caggccctgcttgccaagaaccaatcagaatcagccagggaagacctcgaggaccttctc
cacagggtccgacagttcttccttgaggaggctgcgacaccagagagcattgagaaggtg
gcgcaggaggtgctggctatgagcatatctctgactccggctcagatcgaggagctggca
gataagatcaacagaaccatccaaggtttacaaaacattgactctatcctggatgacaca
agggatgatttggcgaaggccaagagactcaagcagagagcggacgatgcatcaggggat
gcttcggctatccagaaaacagccgaggatgttctcagtgccctggatggagctaagaag
gcccaggaagaagctgagagggagatcatcaccgctgagaataacatccgcgatgctaat
gatgatctggccatgattgagtcggaaacaacttcagcagcagatacgtccaacaggagt
atgactatcttggacaggctgaaggcacgtctgagtgatctccgcaagaaatacaaccag
aacaaatttgaagtagaagaagcagagaaagcgtccagagaagccacggatcttgccaac
caggcagagagggatgcaaatgaccttgataacaaatatcaaagtgcagctggtcggttg
aacaacaagttcaatatgacgtctgatgcaaacgagcgtgcaacacgactgaagaagcga
gcagatgaactagctgccggcacacaggagaaatatcagaacttgaagcgaatgcagcaa
gattttgaggacaataacaagacactgaacgagctgtcagacatgattgacgagctgaat
agacgtatgcaggagtacctggacaaaatacaagagaaatcaaaatattatcgtaactgt
taa
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integrated database retrieval system