Haliotis rufescens (red abalone): 124121196
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Entry
124121196 CDS
T07893
Name
(RefSeq) partitioning defective 3 homolog
KO
K04237
partitioning defective protein 3
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04144
Endocytosis
hrf04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
124121196
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124121196
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrf01009
]
124121196
Protein phosphatases and associated proteins [BR:
hrf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124121196
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Par3_HAL_N_term
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
124121196
NCBI-ProteinID:
XP_048247525
LinkDB
All DBs
Position
Unknown
AA seq
1556 aa
AA seq
DB search
MKVTVCFEEVRVIVPCGDGEILVRELIDKAITRYKKATGKSNNHWVSVHNVKAISGGGIL
DPDDQLNDVVDDREQLIADYEEQGRPGLHHNGGDGASASSTGTASPDIFQTGDLSNAIHR
PFPISLQNGKTDVIVTPRDLSLGTSLTVRRGSEPALNLLIDEGPLENGDTSLALGRGRKE
SHQESDEPRSESESDDEQVISRPKDPKEKSPLSRFQRDSKRQSLSNNPEMYRWLDAHDNQ
QDRLKQQVVVERKGPIGGSGTEADLKPQHKDSDGAIIIVLRNDGGPLGIHVIPDIDDDGK
ELGLVLQGIEKGGRIERDGRLRVNDRIIEINGKNLEGVSFDSAQRIFRDAMRTAEVRLKV
VKHRAPPPLPKQPPPLMPKPKGHAPVKPSPLTLPPPKGDNSLPSSPEKTSSPLEGGKSLI
NNNNVNEKNVNLNMMNNNQGNQIPGSPLPPRDKLPIQPGPPLKVASPTKKTPPAVPQRHP
STTLSAPKEQAINTLTNTRKIGRKIQIQLQRGALGLGFSITSRDNPTGESPIYIKNILAK
GAAVQDGRLKPGDRLLEVNSVEMTGKSQSEAVSQLRSIPEGHMCNLVVSRQEVVDELFRM
PRELSDEKTPPVLQPGEATVEDAAVPNMKNKEVIKFEIPLNDTGSAGLGVSVKGKTSSTA
EGTKDLGIFIKSVMNGGAASKDGRLLINDQLLEVHGIPLTNMSNVKAMDQLRRAMQIDGP
MCGFILLTVARKIGAPSPFQSSENSLDTTDGSQFEVLNHGITIYGEKSHSRSSSGDNGIF
TRGDNSGQTRGDKSVRTRSDAGGNEQPNGVNRTKPSNLAVDRLITGDGGNGLRNESYNRA
THESFEVTPESSPAKPSQPGKVGGPIRQDVVIIEDDMYAIPRKRQPPPRPHSTLGIPHIS
PSHSRSSSLEDYNDRQHHRESASDWSSELQEHDELSPTGDFEFHREGFGRQSMSEKRKGH
IDPRGSEFYQRVKETRDTKEKFQARRVQSFHVSEKHYAVLLVSLFVWSLYILSFVFKACM
SNVVLLLLLTSMCLPTGLTEPWDLHEDSPRLKPSGSMESLLSNRTNNNLHEPTHPSQHNR
PFAQAQTRQSNLKRSSSFEDLASDNVPQMEVEEIPTWRFARIGRPRACNDSFRAAVDRSY
DAPTSEHNVMDTSGYVEEESMDSGSLNHTQSNSARSSFSSENTNEDFHSLRKKKHKDKKG
GGILKGLIRLSKGRKSSEENIRRSRSAERPSDSDVRARQLDQERVLLAQQEQERIREFEA
KRRQQMEMLEQQQLKQQLKQQQLLDQQQKLMQQNRPMFYDPQYNQEGFSHPADRGRGGAD
HGGGADRGGGADRGGGADRGGGADRGGEQRGGQSRAEKIQKLRVQHQQQHRERQGQYPHE
DVEEFYERQIQEEERKRMMERERELAGRLRPPSRTEMERVAHVRMGSQDSASNFHQFPSV
SDASGYSDQSQHSHFSHNNYPHQRDRPQSRGAVQYPDPPHRDRPPSRGPQQYVDEWYQTQ
PDFTNANRQTAFTRLNPQNGPNFYGDPARAYRDPKYPAIAGRRPVQTITDPSSAKV
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgacagtttgttttgaagaagtgcgagtgatcgtaccgtgtggcgatggcgag
atcttggttcgagaactcattgataaagcgattactagatacaaaaaagcaacgggaaag
agcaacaaccactgggtgtctgtccacaatgtcaaggccattagtggaggcggtatcctt
gaccctgatgaccagctcaatgatgtggtggacgacagagagcagttgatagccgactat
gaggagcaaggacgcccgggactgcaccacaacggcggggatggggcctccgcctcctcc
acggggactgccagtcccgatatcttccagacaggggacctttccaatgccatacacaga
ccgtttcctatctcactacagaacggcaagacggacgtcatcgttactccgagggatttg
tctctaggtacatctctgacagtacggcggggcagtgagccagctctcaacctactgatc
gatgaaggcccacttgaaaacggagacacaagtcttgcacttggccgaggaaggaaggaa
tctcaccaggagagtgatgaaccaagatcagaatctgagtcggatgatgaacaggtcatt
tctcggccaaaggatcccaaagaaaagagtccactgtcacggtttcagcgtgactccaag
cggcagtctctcagcaacaaccctgaaatgtacagatggctggacgcccacgacaaccaa
caggaccgtctcaaacagcaggtggttgtggagaggaaaggtccaataggtggcagtggt
actgaagccgacctgaaacctcaacacaaagacagtgatggtgctattattattgtgctg
aggaatgatggagggcctctcggaatacatgtcatccccgacatcgatgatgacggaaaa
gagttggggctggtgctacagggtattgagaagggaggccgtattgaacgagatgggaga
ttacgggtgaatgacaggatcatcgagatcaacggcaaaaacctggaaggagtcagcttc
gacagtgcccaaagaatatttcgtgacgctatgagaacagcagaagtaagactgaaagtt
gtgaaacatcgagctcctcccccactgccaaaacaaccaccgcccctcatgccaaaaccc
aaaggtcatgcgccagtgaaaccttcacctttgacccttcccccacccaagggagataac
tctcttccctcaagtccagaaaagacaagctctccattggaggggggaaagtctttaata
aataataacaatgtgaatgaaaagaatgtaaacctgaacatgatgaacaataatcaaggc
aatcaaatcccgggttcccctcttccaccacgagacaagctgcctatccaaccaggtcct
ccactgaaggtggcatcgcctaccaagaaaacaccgccggctgttccccagcgccacccg
tccacaacgttgtcagcaccaaaagaacaagcaatcaacactctcacaaatactcgcaaa
attggaaggaaaatccagattcagttgcagagaggtgctctcggacttgggttcagcatc
acgtcgagagacaaccccacgggggagagtcccatctacatcaagaacatcctagccaag
ggggcagcagtgcaggacggaagactcaagccaggagacaggttgttggaggtgaacagc
gtggagatgacaggcaagtcccagagtgaggctgtgagtcagttgcgaagtatcccagaa
ggccacatgtgtaatctggtcgtgtcaagacaggaagttgtggacgagctgtttcgcatg
ccccgagagctgagcgatgaaaaaacaccccctgtcttgcagcccggggaagctacagtg
gaggatgccgctgtccctaacatgaaaaacaaggaagtgatcaaattcgaaatcccacta
aacgacaccgggtcagccgggctcggcgtcagcgtcaaaggaaagacatcaagtacagca
gagggaaccaaagatttaggaattttcattaaatctgtgatgaatggtggtgcagcctcc
aaggacggacgtctgctcatcaatgaccaacttctagaggttcacggcatcccactgacc
aacatgtccaatgtcaaggccatggatcagcttcgacgtgccatgcaaattgacggacca
atgtgtggattcattttgttgacagttgctaggaaaatcggtgctccttctccgtttcaa
tcaagtgaaaattcactggacacaaccgacggaagtcagtttgaagtgcttaaccatggg
ataacgatatatggggaaaagagtcatagtcggtcctctagtggggataatggcatcttc
acaaggggagataattctggtcaaacaaggggagataagtctgtccgaacaaggtctgat
gctggcgggaatgaacagccaaatggtgttaataggactaagccctccaatttggctgtg
gataggctgattactggtgatggcggaaatgggttgcgtaacgagtcctacaacagggca
acgcatgaaagtttcgaggtgacgccggagagttcccctgccaagccgtcacagccgggt
aaagtgggtggacctatacgacaagatgttgtcatcattgaggatgatatgtatgccata
ccaagaaagcggcagccaccgccacggccccattccacattggggatcccccacatttcc
ccctcccactctcggagctccagcttggaggactacaacgaccgccaacaccatcgcgag
tcagccagtgactggagcagcgaactgcaggagcatgatgaactgagccctacaggagac
tttgagttccacagagaaggctttgggcgccagagcatgtcagagaaacggaaaggtcac
atcgaccctcggggaagcgagttctatcagcgagtcaaggaaacaagggacaccaaagag
aaatttcaggctcggagagttcagtcatttcatgtatcagaaaagcattatgctgtgctg
cttgttagtctgttcgtttggtcactgtatatattgagttttgtttttaaagcatgtatg
agcaatgttgttttgttattgttgctgacaagcatgtgtttaccaacaggcctgactgag
ccctgggacttgcatgaagactcaccgagactgaaacccagtggttccatggagtcgctg
ttgtcaaatagaactaacaacaatctgcatgaacccacccaccccagtcagcacaaccgc
ccctttgctcaagcccagactcggcagtcaaacctcaaacgatcgtcctctttcgaagac
ttggcctctgataatgttcctcagatggaagtggaggagataccaacgtggagatttgct
cgcattgggcgacctcgagcctgcaatgatagtttccgggctgctgtagatcggtcctat
gatgcaccaacatcggaacacaacgttatggacacatctggttatgtggaggaggagagc
atggacagcggatcactcaatcacacccagtcaaattctgccaggtcttcctttagtagc
gaaaacaccaatgaagacttccacagtctcaggaaaaagaaacacaaagacaagaaagga
ggggggatcctcaaggggctgatcaggctcagcaaaggacggaaatccagtgaggagaat
attcgcaggtcaagatcagcggaacgaccgtccgatagcgatgtccgagcccgacagttg
gatcaagagagagtcttgctggcgcagcaggaacaagagagaattagagagtttgaagcc
aaaagacgtcagcagatggaaatgcttgaacaacagcagctgaaacagcagctaaaacaa
cagcagctgttggaccagcagcagaagctcatgcaacagaacaggcccatgttttatgat
ccccagtataaccaggaaggattttctcacccagccgaccgtggaaggggtggggccgac
catgggggtggggctgaccgagggggtggggccgaccgtgggggtggggccgaccgtggg
ggtggggcagaccgagggggagaacagcgagggggacagagtagggcagagaagatacaa
aagcttagggtacagcatcagcaacagcaccgggaacgacaggggcagtacccacatgaa
gacgtggaagagttctatgagagacagattcaggaagaggagagaaagaggatgatggag
agagagagggagctggcaggaagactcaggccaccgagtcgtacagagatggagagagtt
gcacatgttcgaatgggatcccaggacagtgcctccaactttcatcagttccccagcgtc
agcgacgccagcggctactccgatcagagtcagcactcacacttctcacacaacaactac
ccccatcagagggaccgcccacagtctcggggggcggtgcagtatcccgacccccctcac
cgcgatcggcccccatcacgtggacctcagcagtatgtggacgaatggtaccaaactcag
cctgactttacaaatgccaacaggcagacagccttcacaagacttaatccccaaaacggg
cccaatttttatggagaccctgccagagcatatagagaccccaaatatcccgccatcgcg
ggccggaggccagtacaaacaataacagatccaagttcggcaaaagtgtga
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integrated database retrieval system