Haliotis rufescens (red abalone): 124121283
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Entry
124121283 CDS
T07893
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03022
Basal transcription factors
hrf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
124121283
09124 Replication and repair
03420 Nucleotide excision repair
124121283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124121283
03400 DNA repair and recombination proteins [BR:
hrf03400
]
124121283
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
124121283
DNA repair and recombination proteins [BR:
hrf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
124121283
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
124121283
NCBI-ProteinID:
XP_048245839
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MAATRKLDCKDLHAYLKTLHTSILDRLYSHPATCLAVFRELPELGRHYVMRILFVEQPVS
QTVVGQWISNKHQEEHRFAVKSLSDLRVWHDQPLPGGMPGWLLNHTFRKNLKIALLGGGD
PWTGGGPLPQDKHAKDVSFLDKYALERWECVLHFMVGSSEGTDGVSKDIIDVLLHSGLMK
EETSEPLPSISPAGFQFLLLDTGSQVWFFMLQYLESVEARGMDLVECLSFLFQLSFSTLG
KDYCTEGMSESQLKFLQHLREFGLVYQRKRKSQRYYPTRLAINIASGLTTFNTDSHSSGY
LVVETNYRVYAYTDSPLQTALLALFCQMLYRFPNMAVANLSRDSVRAALTRGITAEQIIN
FLRSHAHPEMMKTTPVIPLTVCDQVRLWELERDRFKFTDGVMYNQFLSQNDFELLRDYAQ
DLNVLVWDNPSKRVMIVSRGGHDDVKRFWKRQKQS
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacgagaaagttggactgcaaagatctgcacgcttacttgaaaaccttacac
acgtccatcctagacagactctacagccaccccgcgacatgcttagcggtgtttagagaa
ctgccggagctgggtcgccactatgtgatgagaattttgtttgtggagcagccagtttcc
cagacggttgtgggtcagtggatctcaaacaagcaccaggaggagcatcggtttgcagtc
aagtctctgtcggatctgagggtgtggcatgaccagcccctccccggggggatgcctggc
tggctccttaatcacacattccgaaaaaacctgaagattgccttgctgggaggtggtgac
ccctggaccggtggaggtccactgccgcaggacaaacatgccaaggatgtctcgttcctg
gacaaatacgccctggagagatgggagtgtgtgcttcacttcatggtggggtcgtccgag
gggacagacggtgtcagcaaagacatcattgacgtgctgctacacagtggacttatgaag
gaggagacgtccgagccgctgccatccatctccccagcgggcttccagttcctgctgctt
gatacaggctcccaggtgtggttcttcatgctgcagtacctcgagtcagtggaggctcga
gggatggatctcgtggagtgtttatcatttttgttccagttaagtttttccacactagga
aaggattattgcactgaggggatgagtgaatctcagctgaaattcttgcagcacctcaga
gagtttggactggtctatcagcgtaagagaaaatctcaaagatattaccccacccgtctg
gcaatcaatatagcatcgggactgacgactttcaacactgacagccattcatcagggtac
ctggtcgtcgagacaaactacagagtgtacgcttatacagattctccactacagacggca
ctgttggctttattctgtcaaatgttatacagattccctaatatggctgttgccaacttg
tcccgagacagtgtcagggcggcccttacgaggggaataacagccgagcagataatcaac
ttcctgcgcagccatgctcaccctgagatgatgaagacaacccctgtgatacccctgacg
gtgtgtgaccaggtacgcctctgggagcttgagagagaccgtttcaagttcactgatggt
gtcatgtacaaccagttcctgtctcaaaatgactttgagttgctcagggactatgcacaa
gatctgaacgtcctcgtctgggacaatccaagtaaaagagtgatgattgtctcacgaggg
ggacatgacgatgtcaaacgattctggaagagacagaagcaatcgtga
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