KEGG   Haliotis rufescens (red abalone): 124121540
Entry
124121540         CDS       T07893                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
hrf  Haliotis rufescens (red abalone)
Pathway
hrf03020  RNA polymerase
hrf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124121540
  09124 Replication and repair
   03420 Nucleotide excision repair
    124121540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hrf03021]
    124121540
   03400 DNA repair and recombination proteins [BR:hrf03400]
    124121540
Transcription machinery [BR:hrf03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     124121540
DNA repair and recombination proteins [BR:hrf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124121540
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4 DUF7667
Other DBs
NCBI-GeneID: 124121540
NCBI-ProteinID: XP_046340516
LinkDB
Position
Unknown
AA seq 166 aa
MFSFFSTFVHVFTTPKKPEVYQIRVGNMASVLPSDQQEEDASELQFPKEFENAETLLISE
VQMLLEHRKQQNESAEEEQELSEVFMKTLNYCSRFSKFKNRETIAAVRSSLMQKKLHKFE
LAALANLCPETSEEAKSLIPSLEGRFEEDELQQILDDIKTKRSFQY
NT seq 501 nt   +upstreamnt  +downstreamnt
atgttttctttcttttcgacttttgttcatgtttttactacaccgaaaaaaccggaagtt
tatcaaattcgtgtcggcaacatggcgagcgttttgccatcagaccagcaagaggaagat
gcctcagaattacagttccctaaagaattcgaaaatgctgagactctgctgatatcggaa
gtacagatgttgttagaacatcgcaagcagcagaacgagagtgcggaggaggagcaggaa
ctgtctgaggtgttcatgaagacgctcaactactgctcccgtttcagcaagttcaagaac
agagaaaccatcgccgctgtcagaagttcgctcatgcagaagaagttacacaagtttgaa
cttgctgccctggccaacctgtgcccagaaacatcagaggaggcaaaatctctcattccc
agtttggaaggaaggtttgaggaggatgagctccagcagatattggacgacatcaagacc
aagcgaagtttccagtactga

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