Haliotis rufescens (red abalone): 124121925 Help Entry 124121925         CDS       T07893                                  Name (RefSeq) helicase POLQ-like   KO K19178   POLQ-like helicase [EC:5.6.2.4] Organism hrf  Haliotis rufescens (red abalone) Brite KEGG Orthology (KO) [BR:hrf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:hrf03400]     124121925 Enzymes [BR:hrf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.4  DNA 3'-5' helicase      124121925 DNA repair and recombination proteins [BR:hrf03400]  Eukaryotic type   Other factors with a suspected DNA repair function    Helicases     124121925 SSDB OrthologParalogGFIT Motif Pfam:  POLQ_helical DEAD HTH_61 Helicase_C DUF7898 ResIII HHH_5 DNA_pol_lambd_f DUF4332 HTH_64 Cdd1 Motif Other DBs NCBI-GeneID:  124121925 NCBI-ProteinID:  XP_048241105 LinkDB All DBs Position Unknown AA seq 1077 aa AA seqDB search MESDEAGPTRRVARSRKRSASSLLDSSNIVSSAKKHHEKTQKHTMHSQAHDSFSFEEDWF INSFCSENHSSYPEKSNSHIPGEKMALVRKLEKSDSPSVHTTSNTSDAVESVRCGIDSVV VKATSKPNGSSATDGGTFKVQPAVSGGTGDAVHEGTKHLSLKDRLKQKMKRNSMAPSGVN HAVDLLRETVLEQAQMEALAIQKQGTDVDIGPFYGLPSKVQKLLETHRGIKKFYDWQEEC LQLPAVLQGRNLIYSLPTSGGKTLVAEILILRELLCKKKDAILILPYVSIVQEKVRNLCQ FALELDFLVEEYAGSKGRFPPVKRRRKRTLYIATLEKAHSLVNSMIETHYLDSLGLVVVD ELHMIGEGGSRGAILEAALLKLLHCGGTQIVGMSATLNNIRDIQTFLQAEVYSNNFRPVK LTEYVKVEDSVFMVDSGQVDLRGQDILKHDRVIMFPYNADLKIQDPDHLLGLVMEVIPNN SCLVFCPTKKNCENVALMLSKLMIKHHRHLTTVKRTERKQLLQELYRDGNGQICPVLEYT IHLGIAYHHSGLTMDERRLVEDAYSEGTLCLLTCTSTLAAGVNLPAKRVILRSPYVGSGF INHSQYKQMTGRAGRAGIDDSGESMLITKKADAPKVRELLTTTQEPCHSSLMYDEGKGIR SLLLSSIGLQILKSTDEILRFMKQTLLSVQAVDLGCDVEAVTRASLNQLLKLKLVQQARK TPDSSQNGSQKTKMSNQSQGLNKPKIFSQTSPGSQQSINSLAAGPAKSETASNSGGHDSH VAMGTVTMEDGATLHADMSNSPNIHLEVTALGRATFKGSIDTDNSSLLYDDLKRAEESLV LASYLHLLYLVTPYDMARDLHIPWMVYFEQMNTLNAMEMRVASLIGVSESYIAKKASGQS CRQKVNEFVISRFYLTLMLNELWQQKTVWQVAQRFQLNRGFVQNLLSSAASFASCVFHFC QELDEFWAFQDLLGNFVKRLSYCVSMELIALLEIPGVKLGRARQLYHSGLRTLQDVAAAD PEQLVKNIEHMPRKAARQIVASAKVMLNEKAETLWVEVESLVALPMVQLGTLSVTSQ NT seq 3234 nt NT seq  +upstreamnt  +downstreamnt atggagagtgatgaagctggtccaactagaagggttgctcgttcaaggaaaagaagtgcc tcatctctgcttgactccagtaatattgttagcagtgccaaaaagcatcacgaaaaaacc cagaagcacacaatgcattcacaggctcacgactcattctcttttgaagaagactggttc attaactcattctgtagtgaaaatcattcatcttatccagagaagagtaattcacatata ccaggggaaaaaatggcattagttagaaagttggagaaatctgactctccgagtgttcat acaacatcaaacacatcagatgcagttgaatctgtgagatgcggaattgacagtgtggta gtcaaggcaacaagcaaaccaaatggaagttctgcaactgatggaggaaccttcaaagtc cagcccgctgtgagtggtgggacaggagatgctgtacatgaagggactaaacatttgtct ttaaaggatagactcaagcagaagatgaagcgcaactccatggctccgtctggagtgaat cacgccgtggatctgctccgggagacggtattggagcaggctcagatggaggctctagcg atacagaagcagggcacagatgtggacatagggccgttctatggccttccctccaaggtg caaaagctgctggagactcacagaggaattaagaagttctatgattggcaggaagaatgt ctccaactcccagcagtgctccagggcaggaatctgatctactccctccccaccagtgga ggcaagactttagttgccgagatactcatccttcgtgagctgctgtgtaagaagaaagat gccatcctcatcctgccttatgtctccatcgtacaggaaaaggtacggaacctgtgtcag tttgccctggaactggacttccttgttgaagagtacgccggaagcaaggggaggttccct cctgtcaagcggcgccgcaagcggaccctctacatagctaccttggagaaggcccactcc ctggtgaacagcatgatagaaactcactacctcgactctctgggccttgtggttgtggat gagctacacatgataggagagggaggaagtagaggggccatactggaggcagcgttactc aagttgctgcactgtggggggacacagattgttggcatgagtgctactctgaacaacatc agagacattcagacatttctgcaggcagaggtgtactccaacaactttaggccggtgaaa ctgacggagtatgtgaaagtggaggacagcgtgtttatggtggacagtggtcaagtcgac ctgcgagggcaggacatcctcaagcatgaccgagtcatcatgttcccatacaatgctgac ttgaagattcaggaccccgaccatctcctggggctagtgatggaggtgattcccaataac tcctgcctagtcttttgccccacaaagaaaaactgtgagaatgtggctttgatgctgtct aagctgatgatcaaacatcacagacacctgaccacggtaaaacgcacagagaggaagcaa ctgctccaggagctgtaccgagatggcaacggtcagatctgtcccgtcctggagtacacc atccacctgggtatcgcctaccaccacagcggcttgaccatggacgagcggagactggtg gaagacgcctactccgaggggacgctgtgtctcctcacctgtacctccaccctcgctgcc ggcgtcaacctccccgccaagagagtgatcctgcgaagtccctatgtcggcagtggcttc atcaatcacagccagtacaaacagatgactgggcgggcggggcgggctggcattgatgat tcaggggagagcatgctcatcacaaagaaggcggatgctcccaaggtgcgtgaactgctg accaccactcaggagccctgccacagcagcctgatgtacgatgaagggaagggcatccgg agtctgcttctctcctccattggactccagattttgaaatcaactgatgagatcctgaga ttcatgaagcagacgttgttgtcggtgcaagcagttgacctgggctgtgatgtggaagct gtgaccagggcctctctcaaccagctgctgaagctgaaacttgtccagcaggccaggaaa acacctgactcgtcacagaatggttctcagaaaacaaagatgtccaatcagagtcaaggc cttaacaagccgaaaatattctctcaaactagcccaggatcgcagcagtccataaacagt ttggcagcaggacctgccaaatctgaaactgcatctaacagtggtggtcatgatagccat gttgccatgggaacagttacaatggaagatggagctactcttcatgcagatatgtccaac agtccaaatatccatctggaagtcacagcactaggcagggcaacgtttaaagggtctatc gacactgacaacagcagcctgctgtatgatgacctgaagagggcggaggaatccttggtt ctggcctcctatctccatctcctgtacctcgtcactccgtacgacatggcgcgggaccta cacataccctggatggtctactttgaacagatgaacaccttgaatgcgatggagatgcgt gtggcctccctcatcggtgtgtcagaaagctacattgccaagaaagcctcgggacagagt tgtagacagaaggtgaatgagtttgtcatcagtcgcttctacctgactctcatgttgaat gagctgtggcagcagaagacggtgtggcaggtggcccagcgcttccagctcaaccgtggc tttgtccagaacctcctctcctccgccgccagcttcgcctcctgcgtcttccatttctgc caggagctggatgagttctgggccttccaggacctactgggcaactttgtgaagcgtctg tcctactgtgtgtccatggagctgattgcgctgctagagattcctggagtcaaactgggt cgagctcgccagctataccacagtggactacgaacactgcaggatgttgctgccgccgat ccagaacagctggtgaagaacatcgagcacatgccgcgtaaagcagccagacagattgtg gcttcagccaaggtgatgctaaatgagaaagcagagacactgtgggtggaggttgaaagc ctcgttgctttacccatggttcaattagggactttatcagtgactagtcagtaa

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