Haliotis rufescens (red abalone): 124122060
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Entry
124122060 CDS
T07893
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator homolog isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124122060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124122060
Transcription factors [BR:
hrf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124122060
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_11
PAS_3
PAS
HLH
PAS_9
PAS_4
Per3-like_PAS-A
PAS_2
TFIIA
Motif
Other DBs
NCBI-GeneID:
124122060
NCBI-ProteinID:
XP_046341181
LinkDB
All DBs
Position
Unknown
AA seq
680 aa
AA seq
DB search
MATAALSPGPSGSAGTPDSGKGSRKRNRGKESDDEDSQGGSFGNNLEQADKERFASTLLA
RESHCEIERRRRNKMTAYINELCDMVPTCSTLARKPDKLTILRMAVSHMKTLRGTGNTNT
DGSYKPSFLTDQELKHLILEAADGFLFVVQCDTGRIIYVSDSITPVLNQSQSDWFANVLY
DLVHPDDVDKVREQLSTTESQNTGRILDLKTGTVKKEGHQSSIRLCMGSRRGFICRMKMG
NVQVDPMTANHTVRIRQRNTLGPSHDGNHYSVVHVTGYIKNWPPSKMLVTGVQIDRQDGD
EHGGSHCCLVAIGRLQVTSTPNCSDMLGPNASSEFISRHSVDGKFTFVDQRVTAVLGYQP
QELLGKSAFDFYHPEDQAHMKDTFDQVLKLKGQVMSIMYRFRASNRDWVWLRTSSFSFQN
PYTDEVEYIVCTNSSAKSVQQGPSAAIPNPGDQSAEPTPTINTYPANRTMPTDIRKDYNE
APSYPSDTSRFIAPDVYSQYQQPTIRYPSHSSSMGLSQTSTVPSVGPGIMRRSPAQPAGW
SGAYSRESGPDYIGAGAGAPQGYSQISPNTNSPVGPSTGSAIPAGAPSCQHLAYRSSSTG
NPTLWGQWQQGTSGDVAAAAQAAAVQQQAQQQAQQQAQQQAQQQQAQQHQGQEEFSDVFR
MLDQPASEFNDLGMFPNFTE
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggccgcattatcgcctgggccgtctggatctgcaggcacacctgatagtggt
aaaggatccaggaaaagaaaccgaggaaaagagtctgatgatgaagacagccagggagga
tctttcggcaacaatctggagcaagctgataaagagaggtttgctagtacgctacttgcc
agagagagtcactgtgagatcgaacggcggcggcggaacaagatgacagcttacatcaac
gaactatgtgacatggtgcccacctgcagcaccctggcccggaaaccagacaagctgacc
attctcagaatggcagtgtcacacatgaagacactaagaggcactggcaacactaacaca
gatggatcgtacaagccatcattcttgacagaccaggagttgaaacatcttattctcgag
gctgcagatgggttcttgtttgttgtgcagtgtgatacaggtcgtattatctatgtgtca
gactccatcacacctgtcctcaaccaatcacagtctgactggtttgcaaatgtcttgtat
gaccttgttcaccctgatgatgtggacaaagtgagagagcagctttctacaaccgaatct
caaaacacaggacggatcctagatctcaagaccggtactgtgaagaaagaaggccaccaa
tcatcaatccgcctttgtatggggtctcgtcgtggcttcatctgtcgtatgaaaatgggc
aatgtacaagtcgacccaatgacagctaatcacacagttaggatacgacagagaaacacc
ttaggaccctcccatgacggcaatcattactctgttgtccacgtcacaggatacatcaag
aactggccaccatcaaaaatgctggttacaggtgtccagatagatcgccaggatggtgat
gagcatggcggaagtcattgttgtcttgtagccattggtcgcctccaggtaactagcacg
cccaactgcagtgacatgcttggacctaatgcgtcctcggaatttatatcacggcacagt
gtagatggaaagttcacgtttgtggaccaaagagtaacagctgtgctgggttatcagcct
caagagctgctaggaaagtctgcctttgatttctaccatcctgaggatcaagctcatatg
aaagacacatttgatcaagtgctgaagttgaaagggcaagtgatgtcgatcatgtacaga
ttccgagcctcaaaccgagactgggtgtggctccgcaccagtagcttcagcttccagaac
ccctacactgacgaagtcgagtacattgtctgcacaaactcatcagcaaagagtgtccag
caaggtccctccgctgcaattccgaacccaggtgatcagtctgcggaacccactccaacc
atcaacacatatcctgccaaccgcaccatgccgacagacatcaggaaggattacaatgag
gccccgtcttatccctccgacaccagccgttttattgcccctgatgtgtactcccaatac
cagcagcccacaattaggtaccccagtcattcttccagcatgggtctgtcccagacctcc
acagtgccttctgtaggaccggggatcatgaggaggagccccgcccaaccggctggctgg
tcaggtgcatattccagagagagtggaccagactacatcggggctggagcaggagctccc
cagggctacagtcagatcagccccaacaccaactcaccagtgggtcccagcaccggtagt
gccatcccagcaggtgccccatcctgtcaacacctcgcttatcggtcctcctccacagga
aaccccaccctctggggacagtggcagcaggggacgtccggtgatgtggcagcagcggcg
caggcagcagcagtgcaacagcaggcgcagcagcaggcacagcaacaggcacagcaacag
gcacagcagcaacaggcacagcagcatcaaggacaggaggagttcagtgacgtgttcaga
atgctggatcaaccggcctcagaattcaacgacttgggaatgttccccaactttacagaa
tga
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