Haliotis rufescens (red abalone): 124122402
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Entry
124122402 CDS
T07893
Name
(RefSeq) probable E3 ubiquitin-protein ligase TRIML1 isoform X1
KO
K10653
tripartite motif-containing protein 54
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
124122402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hrf04121
]
124122402
Ubiquitin system [BR:
hrf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124122402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
RING_XB3-XBAT31
zf-RING_5
zf-RING_2
zf-C3HC4_2
zf-C3HC4_4
SPRY
zf-C3HC4_3
zf-RING_6
ATG16
RLIP76_Ral-bd
T3SS_needle_F
Motif
Other DBs
NCBI-GeneID:
124122402
NCBI-ProteinID:
XP_046341428
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
MSSIESELTCSLCLQIYQNPVVLSCMHSYCRECLKDLHSKSKTDVTSSGRNKVTCPDCRG
TTLLGPDGVDGLQKNFIVANIAAKFKETSLVDSTTCPTSSTPRLEVHDQSHGKKTQSVYC
LACAKVIKISDEQNSTHCYHVTQDLETTISQKRAKLSTCIKELSKGRTHEGQKLQAATAE
HGAIEEDMSKQQNMIESLEDILKTRKVEVLDRFETLKRQNDASLTDYQQHVKAYISTVDT
ISASARALDEQCLGEEDGLATFIQIADDIMTQICQIPETTKYSPTFIAPPNGERERIAKE
LVDHLNNYCGIGDQTPSSEAMLVPCTQVNREAMPKIVGVENVPSCAETAKVIITWSSTQT
QEEYKVKCSTRTGLGIVKEDFEAIVIGDSFEMDGLRFKTDYVASIRPSIMSSTSDTDVHN
FTTADRIFGGDFHFDNENCHPDLAVSWDTRTVTSEKWKHKEINGCTRTNHGDWTKVYGIA
STLIFRSGCQYWEILVMFTVLRHLKDNDVITSIGICKEGKEDSYEPLCGSFYSLCCTLFK
QPRNSAIAIDFWDGQKKVTSEETPIGHLKRGKPQSLKLGFYLDLNSKVFKIINVEKNSVL
HTFDIIKFDKVTAVASIDNEEKVRTSLELDSYIDTVPSSLYH
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcaatcgagagcgagctgacctgctcgctttgcttgcagatataccagaaccca
gtcgtgctgtcatgcatgcactcgtactgcagggagtgtctcaaagatttacattcgaag
tcaaagacagatgtgacatctagtggaaggaacaaagtgacctgccccgactgtagagga
actacgctcctgggaccagatggagttgatggacttcagaaaaacttcatcgtggctaac
atagcagctaaattcaaggaaacatccttggttgactccaccacttgtccaacttcttca
actccacgcttagaagtacacgaccaaagtcatggaaaaaagacccagtctgtatattgc
cttgcatgtgcaaaggttatcaagatttcagacgaacaaaactctacccattgttatcat
gttactcaagacttggaaacgaccatcagccagaaaagggccaaactttccacatgcatc
aaagaacttagcaaaggccgaactcacgaaggccaaaaattacaagctgcgacagcagag
catggtgcaatagaggaagatatgtctaagcagcaaaatatgattgaatcgctggaggat
attctaaaaacacggaaagtcgaggttttggacaggtttgagactctgaaaaggcaaaac
gatgcgtccttaactgactatcagcagcatgttaaggcctacatctccactgtcgacact
atctcagcatcagcacgtgcacttgacgaacagtgcttgggcgaagaggatgggctagct
acgttcatacagattgctgacgacatcatgacacagatatgtcagatccctgagacaacc
aagtattcgcccaccttcatcgcacctccaaatggtgaaagagagagaattgcaaaggaa
cttgtggatcatttgaacaattattgtggaattggagaccagaccccgtcttctgaggcc
atgttggtaccctgtacacaggtgaatcgtgaggcgatgccaaagattgttggtgtagaa
aacgtcccttcctgcgcagaaacagcgaaagttataataacttggtcttcaacacagacg
caagaagaatacaaagtgaagtgttcaacaagaacagggcttggaatcgtgaaggaagat
tttgaagccattgtcattggcgattcgtttgaaatggatggtttgcgatttaagacagat
tacgttgcatcaattcgtccaagcattatgtcaagcacgagcgacactgacgttcacaac
tttacaactgcagatcgtattttcggtggggatttccattttgataatgaaaactgtcac
ccggatttggccgtatcatgggacactcgaacagtgacaagcgaaaagtggaagcataag
gaaatcaacggatgtaccaggacaaaccatggggactggacgaaggtgtatgggatagct
tcaactctgatattcagaagcggttgtcagtactgggagatccttgtaatgttcactgtc
ctgaggcatctgaaagacaacgatgtcataacaagtattggaatctgcaaggagggcaag
gaagattcctatgagccactgtgtggtagcttttactctctctgctgtacactcttcaag
cagccgagaaactcagccattgctatagacttctgggatggtcagaagaaggttacaagt
gaagagacaccaattggacacttaaaacggggcaagccccagtcactaaaacttggattt
tatcttgatctaaacagtaaagtgtttaagatcataaatgtagagaaaaacagcgtactt
catacttttgacataataaagttcgataaggtcactgcagtggcgtctattgacaatgag
gaaaaggtccgaacatctttagagttagattcgtacatcgataccgttccatcatcactg
tatcattaa
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