Haliotis rufescens (red abalone): 124122407
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Entry
124122407 CDS
T07893
Name
(RefSeq) probable ribonuclease ZC3H12C isoform X1
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124122407
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
124122407
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH_4
KH_N4BP1_1st
IF2_N
UBA_9
zf-CCCH
PRORP
Motif
Other DBs
NCBI-GeneID:
124122407
NCBI-ProteinID:
XP_046341444
LinkDB
All DBs
Position
Unknown
AA seq
1060 aa
AA seq
DB search
MAEDEVSIHGSKLSAVERCKERVSRLFGVATHTSFIALKDDGPCKIRLCAIGPKPQESLE
KAKIYLEAVLGEDPSVVSDTLTFSPQDFDMVQKYHDKIEFLSQAFVDILPKCTLRIQGKQ
TSVNLVRDCISQVLNRDSVLPVPSNRKNISSLLVRCVDSSFLGDRLSPEHFTDGAPLSPA
VSDHLRSDEVGTDNTESSHSSQSGNYRPDLGLIERGTFVADIAKSPVSVTGSEVFRDNSI
SSSSRSDSSESDLDMDRFSSAEYKAKLEKAVKLGYSEEQLIQALQKLGFDADQNQVLSEM
IKLGSSSKGTQEEARGFDERIDSFEDVDGLIERRKRDVVDDSSNLRHIVIDGSNVAMSHG
KEVFSCHGIHLAVDWFRQRGHENITVFVPQWRKETSRPDAPITDQDILLQLERDGILSFT
PARRVGGRRVVCYDDRYILKLAAEVDGIVVSNDNYRDLVNEKPEFKKVVEERLLLYTFAS
NRFMPPDDPLGRRGPTLDNFLRKEPTVPEPLPPECPYGKKCTYGSKCRYHHPERKNQPHQ
LVTDKLKEQAKQKMQEWASKGVDDKKKPRDVGKKVPRKQPLSRTQSVFPAGLSDEFMAPA
SITSTDLSDMAKPDKPDYNDKLDKLRKNLERAEKDRKVYTDDREPSPSIVGRRTPNYDFP
GLAQQDNQLKVPLSQPKEGLVSGHLLLAKKLSDEAQDSKFFRKDGDHSPDDVSSASPHQF
TYPPSPQRPASQSSGLGDSPYHHRVSPHHMLPPQPEPGVCLSGPSALMRQDGSSVGSFEY
DQQCQSFPLPPTSFLPQHHAGSGGGSKKGQMMYWGYPDEVYGHSSLHHAPSAPSHSGHVS
LSRSMQRQNSTSDPQLHMVGADGERMKYDSDKGMPHAYSSSIHQYSPFHQPVQHQAGEAG
YPQGAGYMHGWGEVSGDMISHPVQRTYHPSPQDQYSPAGQERKVSSDYGVWNRPGSIPQS
PVNPYSPQANMSHVPFQQSVQQPMHLHMQSSSQIPFSAPSSMPQRVDAPIEVSDSRYALY
YHLCGLFPRAKVTAVMNQHPEERDPKILCTYIMSLGERLF
NT seq
3183 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggatgaggtctcaattcatggatccaagttgagcgctgttgaaagatgtaag
gagcgggtgtcacggctgtttggggtagccacccatacgtcgttcattgctttgaaagac
gatgggccgtgcaaaattcgcttgtgtgcaatcggtccaaaaccacaggaaagtttggaa
aaggcgaaaatctacttggaggccgtactcggtgaagacccatctgtcgtcagcgacact
ttaactttctctccgcaagacttcgacatggtgcagaaatatcatgataagattgaattt
ctttcacaagcatttgttgacatcctcccaaagtgtactttaagaatacaaggcaaacag
acaagtgtcaacttagtaagagactgtatcagtcaagttcttaaccgcgacagtgtcttg
cctgttccttcaaacagaaagaacatttcttctttattagttagatgtgtagactcctct
tttctgggggatcgcttgagtccagagcactttactgacggagctccattgtcgccagca
gtgtccgatcatctccggtctgatgaagttggtactgataacacagaatccagtcattcg
tctcagagtgggaactaccgccctgatttggggctcattgaaagggggacatttgttgca
gacatagcaaagtcacctgtgtcagtcacaggaagtgaagtttttcgtgacaatagtatc
agttcaagttctcggagcgactctagcgagtctgaccttgacatggacaggttcagctcg
gcagagtacaaggccaagttggagaaggctgtaaagttgggctactctgaagagcagttg
atacaggcattgcagaaattgggatttgatgcggaccagaaccaggtcttgtctgagatg
atcaagctggggtcgtcttccaagggaacccaagaggaagccagggggtttgatgaaagg
attgacagctttgaagatgtagatgggctcatcgagaggaggaaacgagacgtggttgat
gacagcagcaaccttcgacatatcgtcattgatggcagcaatgttgccatgagtcatggc
aaagaagtgttttcttgtcacggtattcaccttgcagtggattggttccgacagcgcgga
catgagaacattacggtgttcgtaccgcagtggaggaaggagacgtcgcggcccgatgcc
ccgataacagatcaggacatcctgctgcagctggagagggacggcatactcagcttcacc
cccgcccggcgcgtgggggggcggcgcgtggtctgctacgacgaccgctacattctgaag
ctggcggcggaggtggacgggatagtggtttccaatgacaattaccgtgaccttgtcaat
gaaaagccagagttcaagaaggtcgtagaagagaggcttcttttgtacacctttgcatcc
aacaggtttatgcccccggatgacccccttggaaggcggggcccaactctggacaacttc
ttacgtaaagagccgaccgttcccgaacctctgccccctgaatgtccgtatggtaagaag
tgtacgtacggcagcaagtgccgctaccatcacccagagaggaagaatcagccacaccag
cttgtgacggacaagctcaaggaacaggccaagcagaagatgcaggagtgggcctccaaa
ggtgttgatgacaagaagaagccgagggacgtggggaagaaggtccccaggaagcagcct
ctgtcccgcactcagtctgtgttccccgcgggcctctccgatgaattcatggccccggca
agtataaccagcacagatctctcagatatggcaaagccagacaagccggactacaatgac
aaattagataagttacgaaagaaccttgaacgagctgagaaggaccgtaaggtgtatact
gatgaccgtgaaccatctccatcgatcgttggccgacgcactccgaactatgactttcct
ggtctggcccagcaggacaaccagctcaaggtgccgctgtctcaaccaaaagaaggcctt
gtgagtggacatctccttctggccaagaagttgtccgatgaagctcaggattccaaattc
ttccgtaaggacggtgatcattctcctgatgatgtgagcagtgcatcgccacatcagttc
acataccctccaagtcctcaaagacccgcatctcagtcatctggtctgggagacagtccg
taccaccacagggtttccccgcaccatatgcttcctccccaaccagaacccggtgtctgt
ctgtccggccccagcgcgctcatgaggcaggatggttcgtctgtagggtcattcgagtat
gaccagcaatgccagagtttcccgctcccgccgaccagcttcctccctcaacaccatgct
ggcagcggcggcggcagcaagaaggggcagatgatgtactggggctacccggacgaggtg
tatggacattcctccctgcatcacgctcccagtgcgcccagccattccggacatgtgtct
ctcagtcggtcgatgcagcgacagaatagcacatccgaccctcaactgcatatggtgggt
gcagacggggaaagaatgaaatatgacagtgacaaaggaatgcctcatgcatattcatct
tcaatacaccagtactcaccattccatcagcctgtgcagcatcaagcaggtgaggcagga
tatcctcaaggagcaggttacatgcatggctggggggaggtgtcaggggacatgatctcc
catcccgtacagcgcacgtaccacccctccccacaggatcaatattctcctgctggtcag
gagagaaaggtcagctcggattatggggtgtggaaccgaccaggcagcatcccccagtcc
cccgtcaacccctacagcccacaggcaaacatgtcgcatgtccccttccaacaatcagtg
cagcaacccatgcacttgcacatgcaaagctcctctcagataccgttctctgccccgtca
tccatgccgcagcgtgttgacgcccccattgaagtcagtgacagccgctacgcgctgtac
taccacctgtgtgggttgttcccgcgagccaaagtaaccgcggtgatgaaccaacaccca
gaggaaagggaccctaagattctctgtacctacatcatgagcttaggggaacgcttattc
taa
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