Haliotis rufescens (red abalone): 124123000
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Entry
124123000 CDS
T07893
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hrf04131
]
124123000
Membrane trafficking [BR:
hrf04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
124123000
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
124123000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
WDR55
Beta-prop_IFT140_1st
Lgl_C
Beta-prop_RIG_2nd
Beta-prop_WDR90_POC16_2nd
WD40_Prp19
Synaptobrevin
Beta-prop_WDR19_1st
Beta-prop_VPS8
WD40_like
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
124123000
NCBI-ProteinID:
XP_046342185
LinkDB
All DBs
Position
Unknown
AA seq
1444 aa
AA seq
DB search
MSTVKGKRFTLKGVLDGLRSSVSTPPKAEMEIEESLRSEHFQVCKTVRHGFPFQPTAVAF
DPVQHILAIGTKSGSLRILGRPGVDCHCVHDSDAAIIQILFLVNEGALVTVCSDDSLHLW
NYRQKRPEIVHSLKFQRERITFCHRPFQSKWLYIGTERGNVHIVNIESFILSGYVINWNK
AIELSRKTHPGPVVHLSDNPIDASKLLIGFESGTIVLWDLKNKIAETRYSSPEALRSIAW
HHEGKQFMCSHSDGSLTTWGLKPTPKPMNSMFPHAKLGKDGKPDPCKPITKVDWKSIRNG
EPLVIFSGGMSYDRAGRTPSITVMNGRSTTVLEMEHNVVDFVVLCETPWSNDFQDPYAIV
VLLQNDLVVVDLTSPGYPCFENPYPMDLHESPVTACQYYADCPPDLIPAFYSVGSKQKKT
GFTEKQGWPVQGGEWPTLACSYPEIIITGHADGSLKFWDASAVTLQVLYKLKTAKIFEKP
KKTPESQDDDPFAIQMIYMCSESRLLCVAGASHCMLFKFSKQEANLDIPFLETSIVYEIY
DDLDSPEYDYPKPSLGLVTQTSGSMGSYSSNTSDSAKQSDHTTSVKVKTGSRKWSAGYQP
DLVCVLTWVDGEPPGNITSILVNSTYGLMAFGNESGLAIIDFMQRTCLLNLGTPDLYGSM
DPYQRAPRSPRGKKPQNAEGVGQNSEESKSPTTDQSSPPSMFVTSPVPAPRSKKKDDSKG
GANPPPPRPPPPKHRATSGDLKVISECSIDSNVFPLQNEPFSPYEIVVQPGDPLFNNSLN
SDKTGATLAPFRPKAHSQSGRREPKQEPSQNVVSNTSASEGLDDGDTTPPIHDPDSSGPD
PLLESQKPAMKKCMSDTTKIRDDQVLLKTRKLVRRSSSDPDLSALPSNQGNKKSFIKRIR
NSYKGRGTKEKDSCSHHNKSDSDSPRETVRLEVADSHENQVTVFLADETEMSLGVEQSPT
AEGKECDSVDASGKGFLRKMSTKIRSMGAKPRSSEADGDDDAFHVERDRTRGWRDQARAD
VIDLRENGKKPLSRRISLVDLFQGKKLDKSDGVSFSRSRSSSMSSLENVSKEAIQSLMFA
DSYTRKTGREDNFTCPCLWVGTSLGSVIVIVLNLPPTGEQRLTQPVIVSPSGTIFRLKGA
ILAMSFLDCNGVLIPSVSETWKESPQRENRDSNEKALKNSNIGIQRQMSLSNKPRISPTS
STEMSDRQFVIICSEKQGRVMSLPSQTCAYKVKITETSFVVRAEVVAVRDSVCLMCYVAN
GHIMAFSLPSLKPILDVDFLPLTDYRVARTFCFSNSGHALYLCSPTEVQKITYSADISET
LNDMLGDLFLACETPDAPKQGFFKNLFSGGPSTLDREELFGENSGKASKGLAKHVPGSGL
QHLQAQSGAIGGEIARARMALVERGEKIGDLDDKSAQMLSQAESFAQAAHQIMSRYKDKK
WYQF
NT seq
4335 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacagttaaaggaaaacgatttaccttgaagggtgtgcttgacgggcttagatcg
tccgtgagcacacccccgaaggccgagatggagattgaggaatcgctacggtccgagcat
tttcaagtctgcaagactgttagacacggtttcccattccaaccaactgccgttgcgttt
gatcctgttcaacatattttagcaatcggaacaaaatctgggtcactccgaatacttggt
cggccaggtgttgactgccattgtgtccacgacagcgacgctgccatcatccagatcctt
ttccttgttaatgagggtgctctagtgacagtttgctcagacgacagccttcacctatgg
aactatcggcagaagcgtccggaaattgtacattctttaaagtttcagagggaaaggatt
actttttgccatcggcctttccaaagcaagtggttgtacataggcacagagcgaggcaat
gtgcatatagttaatattgagtctttcattctctcggggtatgttattaactggaacaaa
gcaattgaactgtctcgaaaaacacacccagggccagtagtgcatctcagtgataaccca
atagatgctagcaagcttttaataggttttgaatctggtaccattgtgctctgggatctt
aagaacaagatagctgagacaagatacagctccccggaggctctacggtcaatcgcctgg
caccacgaagggaagcagttcatgtgcagtcattcagacggaagcctgacaacatgggga
ctcaagccgacgcccaaacccatgaacagcatgttcccccatgccaaacttggcaaggat
ggcaaaccagacccgtgcaagcctataaccaaggtcgactggaaatcaatccgaaatggt
gagccgctagtgatcttctcaggtgggatgtcatacgaccgagctggccggactccaagt
attacagtgatgaatggaaggagcaccacagtgttagagatggagcacaacgtggtggac
tttgtggtgctttgtgagactccatggtcaaatgatttccaagacccctatgctattgtc
gtgctgctgcaaaatgatcttgttgttgtggatcttacgtcgcccggatacccatgtttc
gagaacccatacccaatggacctccatgagtctccggtgacggcctgtcagtattacgct
gactgtcccccagacctcatacctgcgttctactctgtcggctcaaaacagaagaaaact
ggcttcacagaaaagcagggctggccagtacagggaggagagtggcccacactggcttgc
agttatccagaaatcatcatcaccggacatgctgatggatcgctcaagttctgggacgca
tctgctgtgacattgcaagtgttgtacaagctaaaaactgccaaaatcttcgaaaaacca
aaaaagacgccggaaagtcaagacgatgacccttttgcaatccagatgatctacatgtgc
agtgagagtcgtctgctgtgtgtggcaggtgcaagtcattgcatgctcttcaagttcagc
aaacaagaggcaaatctcgatatcccttttttagagacgtctattgtatatgaaatctat
gatgaccttgattctcctgagtatgactaccccaagccgagtttgggcctggtgacacag
accagtggtagcatgggctcctactccagtaatacctccgacagtgccaagcagtccgac
cacacgacgtccgtgaaggtgaagaccggcagtaggaagtggagtgcaggctaccagcct
gacctggtctgcgttctgacgtgggtggatggcgagcccccgggcaacatcaccagcatt
ctcgtcaactccacatacggcttgatggccttcgggaatgagtctggcctggcaatcatc
gacttcatgcagaggacgtgtctcctgaacctgggcacccctgatctctatggttccatg
gacccctaccagagggcgcctcgatctccacgtggaaaaaagccacagaatgctgaaggt
gttggtcagaattctgaggaatcaaaatcgccaacaacagatcagtcctcgcctccctcg
atgtttgtaacctccccagtaccagctccgagatcaaagaaaaaagatgattctaaagga
ggggccaacccccctcccccacgaccccctccacccaaacatcgagcaacttcaggcgac
cttaaggtcatctcggagtgttcaatcgactcaaatgtgtttccgttacaaaatgagcca
ttttctccgtatgaaattgttgtccaaccaggcgacccgctgtttaacaatagtttgaat
tctgataaaacaggggccactcttgccccattcagacctaaagcacacagtcagtctggt
aggagagagcctaaacaggaaccatctcaaaacgttgtcagtaacacctcggcttctgaa
ggtttagatgatggtgacacgacaccaccaattcatgaccctgattcaagtggccctgat
ccactgctggaaagtcagaaaccagctatgaagaagtgtatgtcagacacaacgaaaatt
cgagatgatcaagtattattaaaaacccgcaaactggtccgaaggtcatcttcagaccct
gaccttagtgctttgcctagcaaccaaggaaataagaagtcatttatcaaaaggatccgg
aattcctacaaaggaagggggacgaaggaaaaggattcttgtagtcatcataacaaatct
gatagtgacagtccacgagaaactgtacgtttggaggtcgctgatagtcatgagaatcag
gtcacagtgtttttggcagatgagactgagatgagtttgggtgtggaacagtcaccgacg
gcggaggggaaggaatgtgattctgtggatgccagcgggaagggtttcttgcggaaaatg
agtaccaaaatacgttcaatgggtgccaaaccacgctccagtgaagctgacggtgatgac
gacgcttttcatgtggagcgggataggacaaggggatggagagaccaggctagagcagat
gtcattgacttacgggaaaacggaaaaaagcccctttcccggcgaataagcttagtagac
cttttccaaggcaaaaaattagataaatcggacggcgtttcgttttcacgatctcggagt
tccagcatgtctagcctagagaatgtttcgaaagaagccatccagtccttgatgtttgct
gactcgtatacccggaaaacaggtagagaagacaacttcacgtgcccatgcctgtgggtg
ggaacaagcctgggctcagtcattgtgatagtgttgaatctgccccccacaggggaacag
aggctgacacagccagtcattgtgtccccaagtgggacaatcttccgcttaaaaggagca
atattagcgatgtcgtttctggactgtaatggcgtgttgataccatcagtgtccgagacc
tggaaagagtcaccgcagagagagaaccgagatagcaatgagaaggctctcaaaaatagt
aatattggcatacaaaggcaaatgtcattatcaaataaaccacgaatatctccaacatca
tcaacagagatgagcgatcgccagtttgtcatcatctgttctgagaagcagggaagagtt
atgtcccttccatcacaaacatgtgcttacaaagtgaaaattacagagacttcttttgtt
gtgcgagctgaagtggtggctgttagagatagcgtgtgcctgatgtgttatgtagcaaat
ggtcatattatggcattcagtctcccaagtctgaagccgatcctagacgtggacttcctg
cccctcacagactacagggtagccagaacattctgctttagcaacagtggtcatgccttg
tatctgtgttcccccacggaggttcagaaaataacctattctgctgatattagtgaaaca
ttaaatgacatgctcggggacttgttcctggcctgtgagactcctgatgcaccgaagcag
gggttcttcaagaacctgttcagtggagggccttcgacactagacagggaggagctattc
ggggagaacagtgggaaggcatcgaagggcctggctaagcatgtgcctgggagtgggctg
cagcacctgcaggcacagagtggggccatcgggggagagatcgctcgggccaggatggct
ttggtggagagaggagagaagattggcgacttagatgacaagtcagcccaaatgttgtcc
caggcggagagtttcgctcaagcagcacaccagatcatgagcagatacaaggacaaaaag
tggtaccagttctag
DBGET
integrated database retrieval system
