KEGG   Haliotis rufescens (red abalone): 124124690
Entry
124124690         CDS       T07893                                 
Name
(RefSeq) helicase-like transcription factor
  KO
K15711  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:5.6.2. 2.3.2.27]
Organism
hrf  Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:hrf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hrf04121]
    124124690
   03400 DNA repair and recombination proteins [BR:hrf03400]
    124124690
Enzymes [BR:hrf01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     124124690
Ubiquitin system [BR:hrf04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124124690
DNA repair and recombination proteins [BR:hrf03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    124124690
SSDB
Motif
Pfam: SNF2-rel_dom HIRAN Helicase_C zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_UBOX zf-RING_2 zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 Prok-RING_4 ResIII zf-rbx1 zf-ANAPC11 zf-Nse AAA_34 zf-RING_11 AF0941-like zf-RING_6 DUF1644
Other DBs
NCBI-GeneID: 124124690
NCBI-ProteinID: XP_048251267
LinkDB
Position
Unknown
AA seq 1206 aa
MARTRAGKPGSWHANSSDWSIKKKKRKSRRKLKRKNALSGRRMNVPSQQPWLPYMSPMDM
DFITGFAHGSHHHPQVIDLDDLEMSPDEMDDEVMFGTLRADIVGIQYYRGMVNNGEMVSL
EREPHNVYDRNAIRVTNLDRVQVGHLKRDMAKALAFVVDNNMARLEGVVPFGATNKYKMA
ADLTLWGRPEKKQRVVDVLQSHGLSLVTPGGVAAKAGPSYDYSHVVTHRQFLSPAEVKNE
LDKLFEALQEDDKTTMTFPAQAIKSVLYPHQRQGLNWLISRENADNLPPFWEKRKNGYFN
SLTVSTTGNQPNSIRGGILADDMGLGKTLEIISLILTNFVDKQPLAQPVPGRVRASKHPK
SHRRKRKRSLSGEKLCKTEEHLKSTEETICPFEKIRALEAEIESLDEQKENSLSSEDGPC
TVKAEKVEKAKHPFRLHLKQDASFVEVSGEGRSLQMVNMDLDSRQRRGDGHNDLDLGEGL
SVDHTSLLKEVDANYLPEMDLEVKREKSRSARPKRCTKTPARYTFSDSDEDSVGDKLEEE
KRVGPIQRNVCMSEPAAERGRGRGRGRGRGCGKGATWTGGKGKGKSKGKTREGSCPPLPC
LDMEEDLPDLSVSSITQDGGAYIPDESDTDSSDDELPDVQVPFQWNEAGVSNCDFTTGRT
QTAGPRATLIVCPLSVLSNWLGQFEEHLHDCVHLEIYTYYGGSRTKDVSVLAQQDIVLTT
YSTLAADAKTRERPLHKVDWLRVVLDEGHVIRNPKAQQTKAVMELKTQRRWVLTGTPIQN
SMKDLWSLINFLQISPLTERQWWYRTIERPLARGDKCALKRVQHLMANIALRRTKTMKIN
NKPLVELPARDTFIERIQLSEEERKVYTVMQNEGKLLISKYFREGTLLHNYGQVLAILMR
LRQMCCHPSLVARAAEAVKDTQDFLDKMDRGENIDEVRQKLVETLLMVLKSGSDEECAVC
LDSLKSPVITPCAHVYCRKCIVAVINNEKPNSKCPLCRGNIDEAKLIEVPSEFQTEQSSE
PNYLADWQSSAKVDALMSGLVKLRTEDPTVKSLVVSQFTSFLTLLEVPLRANGFKFARLD
GTMSAGKRTAAIQEFSETAPETPTIFLLSLKAGGVGLNLTAASRVFLMDPAWNPASEEQC
FDRCHRLGQTRDVTITKFLVEESVEERMLQLQEKKRQLMNGAFGQKQTVEQRRQTRIAEI
KNLIDL
NT seq 3621 nt   +upstreamnt  +downstreamnt
atggctcgaactagagcaggcaagccaggaagttggcacgcaaattcatccgattggagt
attaaaaagaagaaaaggaagtcgagaaggaagctaaaaaggaaaaatgctctgtctggg
aggaggatgaacgtcccctcccagcagccgtggctgccgtatatgtcccccatggacatg
gacttcatcacagggttcgcacacgggagccaccatcatccgcaggtcattgacctggac
gacctggagatgtctcctgatgagatggacgatgaagtcatgttcgggactctcagggca
gacattgtgggcatacagtactacaggggcatggtaaacaatggtgagatggtgagcctt
gagcgagaacctcacaatgtgtacgaccgcaacgctattcgagtcaccaacttggaccgg
gtgcaggtcggccatctaaagagggacatggccaaagcgctcgccttcgttgtggacaac
aacatggccagactggaaggtgtggttccctttggagcaacaaacaagtacaagatggcc
gccgacctgacgctctgggggcggcccgagaagaaacagcgggtagtggatgtcctgcag
tcacatggcctgtccctggtcacgccagggggcgtggcagccaaggccggacccagctat
gactatagccatgtggtcactcaccgccagttcctctccccagcggaggtgaagaacgag
ctggacaagctgtttgaggctctgcaggaggatgacaagacgaccatgacgttcccggca
caggccattaagtccgtgctgtatccgcatcagaggcagggcctgaactggctcatctca
cgagagaacgccgacaacttgccgccattttgggagaagcggaagaacggctacttcaac
agcctcacagtgtccaccaccggcaaccaacccaacagcatccgaggaggtatcctggcc
gatgacatgggtctaggcaagaccctagagatcatctccctgatcctcaccaacttcgtg
gacaagcagcctctggctcagccagtcccagggagagtgcgggcgtccaaacacccgaag
agtcacagaaggaaaagaaaacggtctctgagtggtgagaaattatgtaaaacagaagaa
catctcaagtcaacagaggagacaatttgcccatttgaaaaaatccgagccctggaggca
gagatagaatctctcgatgagcagaaggaaaactccctgagtagtgaggatgggccttgc
accgtgaaggccgagaaggtcgagaaggccaagcatcccttccgtctgcacctgaagcag
gacgccagttttgttgaggtgtccggagaagggaggtcactccagatggtcaacatggac
cttgacagcaggcagagaagaggtgatggccacaatgaccttgacctaggggaagggctt
tctgtggaccatacgtctctgctgaaggaagttgacgccaactatctacctgagatggat
ttggaagtcaaaagagagaagtccaggtcagcccggcctaagaggtgcacgaagacacca
gccagatacacgttcagtgactcggacgaggactctgtcggggacaagttggaggaagag
aagcgagtaggaccaattcagcgcaatgtttgtatgtcagagccagctgcagagcgggga
agaggtcgaggtcgcggacgaggtcgagggtgcggaaagggagccacatggaccgggggg
aaaggaaaggggaagagtaaagggaagacgcgggaaggcagctgcccacctctgccctgt
ttggacatggaggaggacctgccggacctctcagtctccagcatcactcaagatggagga
gcgtatatcccggacgagtcggacacggactcaagtgatgatgaactcccggatgtccag
gtccccttccagtggaatgaagcaggtgtcagcaattgcgactttaccactgggaggact
caaactgctggacctcgggcaactctcattgtctgtcccttgtcggtgctcagtaactgg
ctgggccagtttgaggagcacctgcatgattgcgtgcacctggagatctacacctactac
ggaggaagtcgcaccaaggacgtcagcgtcctggcccagcaggacatagtgctcaccaca
tactccactctcgctgcagatgccaagaccagagagcggcctctgcacaaggtggactgg
ctgagggtggtgctggacgaggggcatgtcatcaggaaccccaaggcccagcagaccaag
gcggtgatggaactcaagacccagcggaggtgggtgctgacaggaactccgattcagaac
tcgatgaaggatctatggtccctgatcaacttcctgcagatctcgccactcacagagcga
cagtggtggtaccgtaccatcgagaggccgctcgcacgcggggacaagtgtgctctcaaa
cgtgtgcagcacctgatggccaacatcgcgctacgccgcacgaagaccatgaagataaac
aacaagcccctcgtggagctaccggctcgggacaccttcattgaacgcatccagctgtca
gaggaggagaggaaggtctacacagtcatgcagaatgaaggcaaacttctcatcagcaag
tatttccgtgagggcacgctgctgcacaactatggccaggtgctggccatcctgatgagg
ctgcggcagatgtgctgccatccttccctggtggcaagggctgctgaggctgtcaaggac
acacaagacttcctagacaagatggacaggggagagaacatcgatgaggtgaggcagaag
ttggtggagacgttgctgatggtgctgaagtcggggtccgacgaggaatgcgccgtgtgt
ctggacagcctgaagagccctgtgatcaccccatgtgctcacgtctactgccggaagtgc
attgttgcagtcatcaacaacgagaagcccaactcaaagtgtcctctgtgcagagggaac
atcgatgaagccaagctgattgaagtgccttccgagttccaaacagagcaaagctccgaa
ccaaattaccttgctgactggcagtcgagtgcaaaggtcgatgcactgatgagcgggctt
gtgaagctgaggacagaagacccgacagtaaagagcctggttgtgtcacagtttacctcg
ttcctcacgcttctcgaggtaccacttagagctaatggcttcaagtttgctcgcttggat
ggcactatgtctgcaggaaaaagaacggcagccattcaggaattctcagagacagccccc
gagactccgacaatcttcctcctgtcgttgaaagctggcggtgttggtctgaacctcacg
gcagcatccagggtgtttctcatggacccagcttggaacccagcatcggaggagcagtgc
tttgatcgatgtcatcgtctgggtcagaccagggatgttaccattaccaagttcctggtg
gaggagtcggtggaggagaggatgttgcagctgcaggagaagaagcgccagttgatgaat
ggagcgtttggacagaagcagaccgtggagcagcggcggcagacccgtatcgccgagatc
aagaacctcattgacctgtag

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