Haliotis rufescens (red abalone): 124125098
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Entry
124125098 CDS
T07893
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124125098
03036 Chromosome and associated proteins [BR:
hrf03036
]
124125098
Spliceosome [BR:
hrf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
124125098
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
124125098
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
Suf
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
FLYWCH
TPR_14
RRM_occluded
LSM_int_assoc
RRM_7
Lsm_interact
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
124125098
NCBI-ProteinID:
XP_046344380
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MAENVEKMPVDEDGDDVDGTEEAMDAEGNSDSDSSDSGDEDQLEQKIYELQQKVTENPYI
YDLHTQLITTLRQAGELEQLRQAREKMSEIFPLSEELWLAWLRDEVPLATAEGDRSKMEK
LFKQATEDYLSISVWLEYVQYAIGGMGAEDGMQNVRAVFEKSITAAGLHTSQGANIWEAY
REFENAVLAGLMPQPGTVPTPEQEEAFAAQNKRVQNLFRRQLAVPLLDMEETLQEFEEWS
GGQAESGVRQAYVKAVELLDRLRPLEAALLSAEPPRYKEYQALIEHELAHDDPARIQCVF
ERALQENCLHPDLWLQYTNYLVNKLRIPSLVLPVFERAVRNCPWSSQVWQGYLLAQERRG
ETFDTVKGTFERALTCGMATGSDYLLLWTGYCDYLRRRVDWQSDHTEQLKTLRTTLQRAV
DHLMEHFGTEGDPTGSLRQFWATMEGKFCKNMEKARELWNSIMTEGHGSTARMWLEYYRL
ERMCGDNKHCRRLLQKALNSVTDWPESITEAYINFEREEGSLELYDLAVVKCEAQLKRIN
ERREKAAQKEAMQEEQQKNQKSVKKILKKSEKQQHNQQQQQHKQQQHKSGIKSEVEMQAG
QKRKFKEEFKTPPPPGFKGEPPPGYKGEPPTKKAKATKPEGPLPHVTFIPSMRGGRVAYS
AGFKYTVNSTRATTTYWKCREYKCSGTLVTRNDVAARACPRKHNHPPSPFLYGQDFFKYQ
LMERARREAVPVPRIYKEELARLTQVSSLLPAKMLHVIPCFESVKTSMYRERHKAQVEGK
RCDLRPLAGHQGESEAGGHDLGEVQLNSKHCAQDWNSNVESLANTYIDNTHIDNTLIDNK
NIDNKNIDNKHIYQNDYEICDIKQSADDPTIGAETTQYAHGVSHCESLYHVDTGSRCDTG
SHGDVMQKEENPAATSCLHSSGSCHPFCENIKSEHLSETSEQHNCEVDDFVERDVLGTPP
LTGGEGRHACHLTAVCDDRDVKPVIKGDARHIQQDIGTHPFSCGTPSGTTYACDIQSACR
TPFACGTTSACETPSACGTPSACETPSACRTTSACETPSACRTTSACATTSACDIQSACG
TTSACETPSACGTTSACDIQSACEEDHGILVQHDSSKDSRTAFVSNLSYSLEEDPIKEMF
IKCGEVTEVRLVRNYKGKSKGYAYVEFKDEFCVLEALKLDRELIEGRPMYVSKCEDRSAA
RSKPQFKFAMEIEKNKLFVKGLPFTCNKEAVTNIFSQHGKVKDVRLVTYRSGSSKGIAYV
EYETEDEATQAVMKTDGLLVGEHTLSVAISNPPPRKQPEARRGEEFERTPSLGSGKKETD
QRGKVRTQVALVPRSVKRGPSSSTISADSNSTNGQQSDKSTAGMSNADFRSMLLQK
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaaacgtggagaaaatgcccgtagacgaagacggtgatgatgttgatggaacc
gaggaagccatggacgctgagggaaactcagactctgatagctcggacagtggagacgaa
gatcagcttgaacagaaaatatacgagctccagcaaaaggtgactgagaatccctacatc
tatgatcttcacacgcagctgatcacgacgctccgccaggcaggggaactagaacagttg
cggcaagccagggagaagatgagtgaaatattccccctcagtgaagaactatggttggcg
tggctgagagacgaggtgccccttgccactgctgagggagatcgatccaagatggagaag
ctgttcaagcaagccacagaagactacttgtctatctcagtttggttggagtacgtgcag
tatgcgatcggcgggatgggggcagaggatggcatgcagaatgtccgggctgtgtttgag
aagtccatcacagcggcaggtctccacaccagtcagggagccaacatctgggaggcctac
agagagtttgagaatgctgtactggccggcctcatgcctcagcccgggacagtgccgact
ccggagcaagaggaagccttcgctgcccagaacaagcgggtccagaatctgttcaggagg
cagttggctgtacccctgttagacatggaggagacactgcaagagttcgaggagtggagt
gggggccaggctgagagtggggtgaggcaggcctacgtgaaggctgttgaactgctggac
agactccggccactggaggcagcacttctgtctgcagagcccccaaggtacaaggagtac
caggccctgattgagcatgagctggcccacgatgaccctgccaggatccagtgtgtgttc
gagcgagcactacaggagaactgcctccaccccgacctgtggctgcagtatacaaactac
ttggttaacaagctaaggatcccctcccttgtgttgcctgtgttcgagagagctgtgcgc
aactgtccgtggtcgtcacaggtctggcagggctacctgctggctcaagaaagacgtggc
gagacgttcgacactgtgaaaggcacctttgaacgggcactcacgtgtggaatggccact
gggtcggactacctgctgctgtggacaggatactgtgactacctgcggaggagagtggac
tggcagtcagatcacacagagcagctgaagacactgcgaacaacgctgcagagggccgtg
gaccacctgatggagcattttgggactgagggtgacccgactggcagtctgagacagttc
tgggccacgatggagggtaaattttgtaaaaacatggagaaggctcgagagctgtggaac
agcatcatgaccgagggccacggcagcacggcgagaatgtggctggagtactacagactg
gagaggatgtgtggagataacaagcactgccggaggctgcttcagaaagccctcaactct
gtcacggactggcctgaatccatcacagaggcctacatcaactttgagagggaggaggga
agtctggagttgtatgacctggcagtggtcaagtgtgaagctcagctgaagaggatcaac
gagagaagagaaaaggcagctcagaaggaagccatgcaggaggagcagcagaagaatcag
aaatctgtaaagaaaatactgaagaaatcagagaaacaacagcacaatcaacaacaacaa
caacacaaacaacaacagcacaagtcggggatcaagtctgaggtagagatgcaggcggga
cagaagagaaagttcaaggaggagttcaagactcccccacccccagggttcaaaggggaa
ccacccccgggctacaagggcgaaccccccaccaagaaggcaaaagctaccaagcccgag
ggaccactcccccatgttacattcattcccagcatgcggggcggccgtgttgcgtactct
gccggcttcaagtacacggtcaacagcactcgggccacgaccacgtactggaagtgtcga
gaatacaagtgctcggggaccttggtcacacgtaacgatgttgctgcaagagcatgcccc
aggaaacataatcacccaccatcgccatttttatacgggcaagacttcttcaagtaccaa
ctgatggagcgtgcccgaagagaggctgtgcctgtgccaagaatctacaaggaagaactt
gcccggttgacacaagtctcaagtttgttgccggccaagatgcttcatgtgataccttgt
tttgaatccgtcaagacgtccatgtaccgagaacgccacaaggcacaggtggaaggaaaa
cggtgtgacctccgacccctggctggtcaccagggtgaaagtgaggctggtggtcatgac
cttggggaggtgcagttgaacagtaaacattgtgctcaagattggaattcaaatgtggaa
tctcttgccaacacatacattgacaacacacacattgacaacacacttattgacaacaag
aacattgacaataaaaacattgacaacaaacacatttatcaaaatgattatgaaatttgt
gatattaaacagtctgctgatgatcctaccattggtgctgagactacccaatacgctcat
ggtgtcagccactgtgagagtttatatcacgttgatacgggaagcaggtgtgacactggt
agccatggtgatgtcatgcagaaagaggagaatcctgcagctacatcgtgtctacatagt
tcaggttcttgccatcctttctgtgaaaatatcaagtctgaacatttgtctgagacgtca
gaacaacacaattgtgaagttgatgactttgttgagagggatgttctcggaacacccccc
ttgactggaggtgaaggtcgtcacgcatgtcatctcacggctgtgtgtgatgaccgtgat
gtgaagccagtgattaaaggtgacgccaggcacatacagcaggatattgggacacaccct
ttctcatgcgggacaccatctgggactacatatgcctgtgatatccagtctgcctgtagg
acaccatttgcctgtgggactacatctgcctgtgaaacaccatctgcctgtgggacacca
tctgcctgtgagacaccatctgcctgtaggactacatctgcctgtgagacaccatctgcc
tgtaggactacatctgcctgtgcgactacatctgcctgtgatatccagtctgcctgtggg
actacatctgcctgtgaaacaccatctgcctgtgggactacatctgcctgtgatatccag
tctgcttgtgaagaggaccatggtattttggttcagcatgattcttccaaggacagccga
accgcttttgtcagcaatctgtcttatagtttggaagaagatcccatcaaagagatgttc
atcaagtgtggagaagtcacggaggtgcgcttggtccgaaactacaagggcaaatcaaag
ggctatgcctacgtcgagtttaaggatgagttttgtgtacttgaagccctgaaattggac
cgagagttgatagaaggccggccgatgtatgtctccaagtgtgaagacagatcagcggcc
agatccaagccacagtttaagtttgcaatggagatcgaaaagaacaagctgtttgtgaaa
ggtctccccttcacttgcaacaaggaggctgtgaccaacatcttcagccagcatggcaaa
gtgaaggacgttcgtcttgtcacctacaggagcggttcatctaaagggatcgcgtacgtt
gaatacgaaacagaggacgaggcaacacaagccgtgatgaagacggacggactcctggtg
ggggagcatacgctatcggtggccatcagcaacccccctccccgtaaacagcccgaggca
cggaggggggaggagttcgaacgcacgccgtccctggggagtggcaagaaggaaactgac
cagcgaggaaaggtcaggactcaggtggcgctcgtcccgagatctgtgaagcgaggtcca
tcatcgtccaccatcagtgccgactccaactccaccaatggccagcagtctgacaagtca
acagccgggatgagcaacgcagacttcaggagcatgttgctacagaagtag
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integrated database retrieval system
