Haliotis rufescens (red abalone): 124125370
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Entry
124125370 CDS
T07893
Name
(RefSeq) protein capicua homolog isoform X1
KO
K20225
capicua transcriptional repressor
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hrf03000
]
124125370
Transcription factors [BR:
hrf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124125370
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
124125370
NCBI-ProteinID:
XP_046344635
LinkDB
All DBs
Position
Unknown
AA seq
2482 aa
AA seq
DB search
MTRRSDSRTRRGRSNSSSPTGPRQTKSRRRNANQTSESPAPVPEESSIQENNTEVETKGK
DEQMEQTAKRQSQRNAGKESEAKKPTPAASLKSTRTPRAGKKVGMELDQEAASEMAKPSS
SVSLATSLPVTPSNMPKPEPVDTPGDSGIEKSPTELQVVRAIAKPPKKRKANDIEPELVV
SPPPKRPAIDLNEWKNQRVLAKRETVFQPGVVKQIRQNRHIGICFDDKTVIYYNDILNAP
LCDIISDNSPMGMLVSIGTKVCVRISSEENVFYEGFVMEKKNAPVMYKIHLDNKPENKPE
DCWVTRANIRLLQPPWYEDMEDNFSEPEHMYQPIPGGGVYRIERPASSVASIASFDKNDS
SEDEMTAENLSFDSSGMSTPRSGSATPGARSQNGRERNKQPPKKRESARSRSAQSTESSR
SSTPRSPLTTKYKKGDVVSTPNGIRKKFNGKQWRRLCSKEGCTKESQRRGFCSRHLSLKG
KSLRQAPTFPGCRKGEMKEGQIQWTDQSREGETEHDRLLQHQFDMDEKEAANMLVSLGNS
RSTTPAFSPTPQTPISPRLSAQSPPGSAIYRSGSTSFTPISPHTNPQNPGFITSPSRSWS
AGTSKSSTSSEHVSPVTPRFPPSSGGPSAFQPKINVIDPNVLPKPRSLSIATRQDSIVSE
DSGIEIQPPKTPDQHSSHSAHTRQNLYPTGACSILTSTIQQRLAAHNAEMARETAFVTVS
QQQAHAGREQRAYSETGVRNYSGMVSGKSHSMDHVADRHVAILPDHINGGRLPRPSHQEY
EQQLHHGMQERAHDAHSNVPMELTSRASVSVSHNTLSQNTVVSQAHTTLQQQLHQATPNA
GQQQGSSYPAGAVHPTASTLLPVLPVNDHPREAAPAERTNHMREDHSEPSRNEIRVYPWH
SLVPFLTNTGPAVPATPPNGASHPPPQPATPPPVVSKQEPPQTTPGVVETSFKVDDDIDE
DDDDVFEPAPIDSPKKLNARSPTKRRTQSLSALKDKEEPRSPRKSRDKDHIRRPMNAFMI
FSKRHRALVHQRHPNQDNRTVSKILGEWWYALGPKEKQKYHDLASQVKEAHFKAHPDWKW
CSKDRKRSSTIAATLKQRGGNRRLSSTDDLSEAVGDIDDKLDPEVLDLEEREVVTSLEPE
SSMPLSQAAISGIMKQRSLSFSAVPQEEVRGFLPPTCKSYQQPEGLAVESGGISVGRPHQ
LYQQPGSSNNPPRTTVAFHDAPPPHTPQPSQMSQQHYNFTQEQVRQFHRSLGSKGDDDDS
DDEKMVICEDEGGISAGGEMGGIDLNCKEHVSDSETDSQTEEDTLIENKAFPQQRFSPVM
KNITPADIAYRPKPIRRMPDPQMEMDVSSPINKQLAEGLLMPRPSSTGSSFQPKGAVFKA
KSRDGRLMSASSLDMLTEARDDEGMYSTSSRMPGTQQQTVKLGQMKIHNITMTQDKQQFI
VSSNMQTTLGKQNGRGPVMGKITQKSRAAKPMPQSPLSYSPSQASPVSSHHVARPPTAST
VQFPAMPQVMVTHAGHHVGGSVAPTFSTTDKPITTPIPIASKPIHNLPQTTSSKTASVNN
VCIPQQTLLTGNNSNGSMKNVSTILLQSIPSSPYGMTILNSPTVSAVTANKLNNSANVQT
SVNSGAYVTTLRNIAPPQSVQPPQQQVQNLASPALLTNVLLKTNQSSPGTATMAIQQPQT
PTQPTLQPTHVQYILPSVRVQPAPPGGKVQNVLQMALPGGAVQQNIVAVASNNVAPPAQV
QTSNFQISTAPGGLRMTNSPQSKVMPQQQTQTLMAAPKQHPQQAKAVAMVTQLVTVNPSP
AVLATSPHHVQLGQPVVSLTVAHPSVQHQMQPTQSQSVISQQLQQQQQQQRILLPSTQKI
AYVQQGTGIAVPVATTPPGNKAEVSHAYIPAAYVGSVPQVNQGNVQQVLIQPQAVPSPSL
ATSPAPPAQPNIAPKPQLSAHKTQQSPPQAQSSMYYGVMNVRSSSYITFPTDGKGEIGYI
SNPNFQTRPTKVKATLASIPVATESLQRPPVSQGRQVSVSSPRPSPSPGYHLSPSPSTPI
HCSPAPSPTPIHRPPPPPQPVMTQPQVEPQPPPPQPLQSAMSQGRTTVDTREVTFSFDVM
KDSDSGEKPQRACKGKKYSQLRESEMRVKRKKPSPLSDIHEDQGMLSQESSPHGDPSEGD
HQPMEAMSETQSSPAASASPETPSQPKAKHKPPPLSVPPHVLQTSSAPMPSPSLNSPRRS
FFKKTVDDGMDKSLRVLETVNFERKFESLPQFVPEETESKTPIPQSPRAIINVYRKRRKV
SGLVKGDIGETDSNKFSSESETTTPKTPHSARFEDTKFFGSNFNLDALKDPDFVNKMSEC
LLEYEDLNSPRTPKTPSSPGAFSNRRLLDQRRQLVMQLFEEQGLFPTAQATAGFQSKHQD
IFPTKVCLQLKIREVRQKMMAQSAAATKDFEEGHGPLTPNTLEAQFMAAVASSTATTSSS
ATATGPNPVSTAGQMYPPTTYP
NT seq
7449 nt
NT seq
+upstream
nt +downstream
nt
atgacaagacgtagcgacagtcgcaccaggcgtggtcgatctaacagctcttcaccaaca
ggccccagacaaaccaaatccagacgcagaaatgccaatcagacatctgaaagcccagcc
cctgttcctgaggagtcttccattcaggagaacaacactgaagtagaaacaaaaggcaaa
gacgaacagatggagcagacggccaaacgccaaagtcagaggaatgctggcaaagagtct
gaggcaaagaagccaactcctgcagcaagtcttaaaagtacacgcacacctcgggctggg
aagaaagttggtatggagcttgatcaggaggcagcctctgaaatggcgaagccctcgtct
tctgtgtcactggccaccagcttgcccgtcaccccaagcaacatgcccaaaccagagcct
gtggatactcctggggattcaggtatcgagaagtctccaactgagctgcaggttgttaga
gcaatagccaagcctcccaaaaaacgtaaagcaaatgatattgagcctgaacttgtggtg
tcacctccaccaaaacgacctgctattgacttaaatgaatggaagaatcaacgtgttctt
gctaaaagggagactgttttccagcctggtgttgtgaagcagattcgtcagaatcgacac
attggaatctgctttgatgataagactgtaatctattacaacgacatcttgaatgcccca
ttgtgtgacatcatatcagacaactccccgatggggatgctggtttccataggaactaaa
gtgtgtgtgagaatcagttctgaagaaaatgttttctatgaaggttttgtgatggagaag
aaaaatgcacctgttatgtataaaatacacttggacaacaaacccgaaaacaagcctgaa
gactgctgggtgactcgggccaacatccggctcctccagcctccatggtatgaggatatg
gaggacaacttctccgagccggagcacatgtatcagcccatccctggtggaggagtctat
agaatagagaggcctgcatcaagcgttgctagtatagcaagctttgataaaaatgactcg
tctgaagatgaaatgacagcagagaatctgagctttgactcttctggaatgagtacacct
agatcaggcagtgcaacaccaggtgctcgttcacagaatggacgtgaacgcaacaagcag
cctcctaaaaaacgtgaatctgcacgcagtcggagtgcccaatccacagagagtagtcgg
tcgagtactcctcgatctcccctgacaacaaaatacaagaaaggggatgttgtgtccact
cctaatggaatacggaaaaaattcaatggaaagcaatggagaaggttgtgctctaaagaa
gggtgtacaaaagagtctcagaggcgaggtttttgttcaagacatttatcactgaaaggc
aagagtcttcgtcaagctccaactttccctgggtgtcggaaaggggagatgaaagaaggc
cagattcagtggacagaccaatcaagagaaggtgaaactgaacatgacagactgctacag
catcagtttgatatggatgagaaggaggcagccaatatgttagtctcattgggcaactct
cggtcaacgacaccagccttctctccgacaccgcagacacccatctcgccacgtctgtca
gcccaatcacccccaggttccgccatctacagaagtgggtcaacatcattcacccccatc
tccccgcacaccaacccccagaaccctggcttcattacctcgccctcccgatcatggagt
gctggcacctccaagtccagcacctcgtccgaacatgtatccccagtcacaccaagattt
cctccatcttcaggtggcccatctgccttccagccgaagattaatgtcattgaccctaat
gtcttgcccaaacccaggagtttgtccattgctactcgacaggactccattgtgagtgaa
gattcgggaattgaaattcagccaccaaagacaccagatcaacattcttcacattctgca
catacaagacagaatttgtatccaaccggtgcatgttcgattctcacttcgacaattcag
cagcgtcttgctgcccacaatgctgagatggccagggaaacggcatttgtgacagtgtct
cagcaacaggcacatgcagggagggaacagagagcatattctgagactggggtgaggaac
tattctggcatggtttcaggaaagagtcactccatggaccatgtggctgatagacatgtt
gccatattgcctgatcatatcaatggtgggagactacctcgaccctcgcaccaggaatat
gaacaacagttgcatcatgggatgcaggaacgtgcccacgatgcacattctaacgttccg
atggagctgaccagtcgggcgagtgtaagtgtatcccataacactctttcccagaataca
gttgtcagccaagcacataccaccttgcaacaacagctacaccaagctacaccaaatgct
ggtcaacagcaggggtcaagttaccccgctggagccgtgcacccaacagcatccacgctg
ttgccagtgttaccagtgaatgaccacccgagggaagccgccccagcagagagaaccaat
cacatgagggaagaccattcagaaccgtctcggaatgagatccgtgtatatccttggcat
tcactggttccctttctgaccaatacgggaccagctgttccagcaacccccccaaatgga
gcaagtcacccgcccccacagccagccaccccaccccctgttgttagcaaacaggaacct
cctcaaacgactccaggagtggtggaaacatctttcaaggtggatgatgacatagatgag
gatgatgacgatgtttttgaacctgcaccaattgattcacccaaaaagttgaatgccagg
tccccaaccaagagacgtactcagtccctgagtgctctgaaggacaaggaggagccgcgc
agcccacgcaagtcccgggacaaggaccacatccgccgtcccatgaacgctttcatgatc
ttcagcaagcggcatcgagctctggttcatcagcgccatcctaaccaggacaaccgcaca
gtcagcaagatccttggggagtggtggtatgccctcgggcccaaggagaagcagaaatat
catgatctggcatcacaggtgaaagaggcccacttcaaggcgcatccagattggaagtgg
tgttccaaggacagaaagcggtctagcacaattgcagcgaccttgaaacaaaggggaggt
aaccgacgtctgagttcaactgatgacctctctgaagcagttggagacatagatgacaag
ttggaccctgaggtgctggacctggaggagcgtgaggtggtcaccagccttgaacctgag
tcctccatgcccctgtcccaggcggctatcagtggcatcatgaagcagcgatctctcagc
ttctccgctgtgccgcaagaggaggtgcgcggcttcctgccacccacctgcaagtcctat
caacagcccgagggcctggcagtggaatctggaggcatctcagtgggcagaccccatcag
ttgtatcagcaacctggctcttctaacaacccccctcgcaccactgtggcattccatgat
gccccacccccacacacacctcagccgtcgcagatgtcccagcagcattacaacttcacg
caggagcaggtgcggcagtttcaccgcagcctcggttcaaagggtgatgatgatgacagt
gatgatgagaagatggttatatgcgaggatgaaggtggcatcagtgctggtggtgagatg
ggtggtattgacctcaactgtaaggagcatgtgtcagacagcgagaccgacagtcagaca
gaggaagacactctcatcgagaacaaggcgttcccccaacagcgcttctctccagtcatg
aagaacatcacccctgcagacatcgcttaccgccccaaacccattcgccgcatgcctgat
cctcagatggagatggatgtgagctcccccatcaacaagcagctggcggaagggctgctg
atgccgcgaccctccagcactggctccagctttcagccgaagggagccgtgtttaaagcc
aagtcacgcgatgggcgacttatgtctgccagttctctggacatgctgaccgaagcccgt
gacgatgagggcatgtacagcactagttcgcgtatgccgggtacacagcagcagacggtc
aaacttggtcagatgaagatccacaacattacaatgacccaggacaagcagcagtttatt
gtgtcctccaacatgcagaccactctcggcaagcagaatgggcgggggccggtgatgggg
aagataactcagaagtcgcgagccgctaaacccatgcctcagagtcctctatcatattct
ccaagccaggcttcccctgtttcctcacaccacgtcgcccggccccccacagccagtaca
gtccagttccctgccatgccgcaggtgatggtaactcatgctggtcatcatgttggtgga
agtgtggctccaacgttttccacaacggacaaacccatcactactcccatccccattgcc
tcaaagcctattcacaatttaccacagacaacatcatctaaaactgcctccgttaacaat
gtgtgtatcccccaacagactcttttgaccggcaacaattctaatggcagcatgaaaaac
gtgagcacaattctgttacagagcattccaagcagcccatatggcatgacaattctcaac
tccccaactgttagtgctgtcacggccaataaactcaacaatagtgctaatgtgcaaact
tcggtcaactcgggtgcatatgttacaacgctacgcaacattgccccgccccagagtgtg
cagccgccgcagcaacaagtgcaaaacctggcttccccagcattgctgactaatgtgcta
cttaagaccaaccagtccagtcctggcactgccaccatggccatccagcagccccagacc
cccacacagcccaccctgcagcccacacatgttcagtatatcctaccgtcagtgcgagtg
cagcccgctcctccggggggcaaggtccagaacgttctgcagatggctctgccaggaggt
gctgtgcagcagaacattgtcgctgtggccagcaataatgtggccccgcctgcacaggtt
cagaccagcaacttccagatcagcacagcacctggagggcttcgtatgacaaactcacct
caaagcaaggtcatgccacagcaacaaacacagactttgatggcagcacccaaacagcac
cctcagcaagcgaaggctgttgccatggttacacaactagtgactgttaatccgtcgcct
gcagtgctggcgacatccccacatcacgtacagctgggtcagcccgtagtgtcactcact
gtggctcatccctcggtgcagcatcagatgcagcccacccagtcacagagtgtcatatca
cagcaactacagcaacagcagcagcaacagcgcattctcttgccttctacacagaaaatt
gcatacgtccagcaagggacgggcatagccgtgcctgtggcgacaacccccccagggaac
aaggctgaggtgtcccacgcatacatcccagcagcttacgtaggctctgtgcctcaggtg
aaccagggcaacgtacaacaggtcctgatccagccacaagcagtcccatctccatcactg
gccaccagtccagctccccctgcccagccaaacatcgcccctaaacctcagctgtctgcg
cacaagacacaacagagtccaccacaggcacagagttccatgtattatggtgtgatgaac
gtgcggtcttccagctacatcactttcccaaccgatgggaagggagagattggctacatc
agcaaccccaacttccagactcgacccaccaaggttaaggccacccttgccagcatccct
gtcgccacagagagcctgcagagaccaccagtctctcaaggccgccaggtgtccgtcagc
tctccacgcccctccccctccccaggatatcacctgtctcctagtcccagcaccccaata
cactgcagccctgccccctcccctactcccatccacagacctcccccaccccctcagcca
gttatgacacagccccaagtagagccacagccaccacctcctcagcctctgcagtcagcc
atgagtcaagggcggacaactgtggatacccgtgaggtcacatttagctttgacgtaatg
aaggactcagacagtggggagaaacctcaacgggcctgtaaagggaaaaagtacagtcag
ctccgggagtcagagatgagggtgaagaggaagaagccaagccccctgtctgacatccac
gaggaccaggggatgctgtcacaagagtcctccccccacggagacccgagtgagggggat
caccagccaatggaggccatgtccgagacacagtcgagtcctgcagcatcagcgtcacca
gaaacaccgtcacagccgaaggccaagcacaagccccctcctctgtccgtccctccacac
gtactgcagacctccagcgcccccatgccctcgcccagcctcaacagtccacgcaggagc
ttcttcaagaaaacagtggacgacggcatggacaagtccctcagggtgctggaaacagtg
aacttcgagaggaagtttgagtccctgcctcagtttgtgcctgaagagacggagtcgaag
actccaatcccccagagtcccagggccattatcaatgtctacaggaagaggaggaaggtc
tcaggactcgtgaaaggggatattggggaaactgacagtaacaagttctccagtgagtcg
gagaccaccacgcccaagactcctcacagtgccaggtttgaagacaccaagttctttgga
tccaactttaacctggacgctttgaaggatcccgattttgtgaacaaaatgagtgagtgt
ttgttggagtatgaggatttgaactccccccgcactccaaagacgccgagttccccgggt
gcgttctccaatcgcagactgctggaccagagacgccagcttgtgatgcagctgtttgaa
gaacaagggctgttccctacagcacaagctacagccggcttccagtccaagcaccaggac
atcttcccaaccaaggtctgtctccaactgaagatccgagaagtccgacagaaaatgatg
gcccagtctgccgcagctaccaaggactttgaggagggccacggcccattgacccccaac
accctggaggcacagttcatggcagcagtagcttcctccacggccaccacctccagctcc
gccactgccactggacccaaccccgtgtccaccgcgggccagatgtacccccccactacc
tacccctga
DBGET
integrated database retrieval system
