Haliotis rufescens (red abalone): 124128597
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Entry
124128597 CDS
T07893
Name
(RefSeq) SCO-spondin-like
Organism
hrf
Haliotis rufescens (red abalone)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_1
Motif
Other DBs
NCBI-GeneID:
124128597
NCBI-ProteinID:
XP_048241920
LinkDB
All DBs
Position
Unknown
AA seq
1813 aa
AA seq
DB search
MTNQSRRRDCNAPAPEAGGKNCTGPLTETSQTHCNVPPCSGDDDVGEWSQWSAAACTATC
GPDQEGSMERSRSCVMPGNSISCTAALTETQMGNCGLPKCPVDGGLSNWTSWSVVPCPVT
CGVDAMTNQSRRRDCNAPAPEAGGKNCAGPLIETSQTHCNVPPCSVGDDNVTEWSQWSAA
ACTATCGPGEEGSVKRSRSCIMLANNISCKAALIETQMGNCGLPKCPVDGGLSNWTSWSI
VPCPVTCGVDVMTNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRCSGDDNVTEWS
QWSAAACTTTCGPGQEGSIERSRSCVMPANSISCIATLTETQMENCGLPKCPVDGGLSNW
TSWSIVPCHVTCGVDAMRNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVPPCSDDDD
VGEWSQWSAASCTATCGPGQEGSIERSRSCVMPANSISCIATLTETQMENCGLPKCPVDG
GLSNWTSWSIVPCPVTCGVDVMTNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRC
SGDDNVTEWSQWSAAACTTTCGPGQEGSIERSRSCVMPANSISCIATLTETQMENCGLPK
CPVDGGLSNWTSWSIVPCHVTCGVDAMRNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHC
NVPPCSDDDDVGEWSQWSAASCTATCGPGQEGSIERSRSCVTPANSISCIATLTETQMEN
CGLPKCPVDGGLSNWTSWSIVPCPVTCGVDVMTNQSRRRDCNNPPPEAGGKNCTGPLMET
SQTHCNVSRCSGDDNVTEWSQWSAAACTTTCGPGQEGSIERSRSCVMPANSISCIATLTE
TQMENCGLPKCPVDGGLSNWTSWSIVPCPVTCGVDVMTNQSRRRDCNNPPPEAGGKNCTG
PLMETSQTHCNVSRCSGDDNVTEWSQWSAAACTTTCGPGQEGSIERSRSCVMPANSISCI
ATLTETQMENCGLPKCPVDGGLSNWTSWSIVPCPVTCGVDVMTNQRRRRDCNNPAPEAGG
KNCTGPLMETSQTHCNVSRCSGDDNVTEWSQWSAAACTATCGPGQEGSIERSRSCVTPAN
SISCIATLTETQMENCGLPKCRIDGGLSNWTSWSIVPCPVTCGVDVMTNQSRRRDCNNPA
PEAGGKNCTGPLMETSQTHCNVSRCSGDDNVTEWSQWSAAACTTTCGPGQEGSIERSRSC
VMPANSISCIATLTETQMENCGLPKCPVDGGLSNWTSWSIVPCPVTCGVDVMTNQSRRRD
CNNPPPEAGGKNCTGPLMETSQTHCNVSRCSGDDNVTEWSQWSAAACTTTCGPGQEGSIE
RSRSCVMPANSISCIATLTETQMENCGLPKCPVDGGLSNWTSWSIVPCPVTCGVDVMTNQ
RRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRCSGDDNVTEWSQWSAAACTATCGPGQ
EGSIERSRSCVTPANSISCIATLTETQMENCGLPKCRIDGGLSNWTSWSIVPCPVTCGVD
VMTNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRCSVDGGLSNWTSWSIVPCPVT
CGVDVMTNQRRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRCSGDDNVTEWSQWSAAA
CTATCGPGQEGSIERSRSCVTPANSISCIATLTETQMENCGLPKCPVDGGLSNWTSWSIV
PCPVTCGVDVMTNQSRRRDCNNPAPEAGGKNCTGPLMETSQTHCNVSRCSDDDDVGEWSQ
WSAAACTATCGPGQEGSMERSRSCVTPANNISCIAALTEIQMGHCGLPTCPGKCLSILNR
TCHLEATVLAGHS
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaccagagcagacgtagggattgtaacgcccctgctccggaagccggtggcaag
aactgcacgggtccactgacggaaaccagtcagacacactgcaatgttcctccatgtagt
ggcgacgacgatgttggcgagtggagccaatggagtgctgcagcatgcacagccacctgt
ggtccagaccaggagggaagcatggaaagaagcagaagttgtgttatgccgggcaatagt
atcagctgtacagccgcactaacagaaacccaaatgggaaactgcggcctccctaaatgc
ccagttgatggcgggctgtcaaactggacatcgtggtcagtcgtaccctgtcctgtcaca
tgtggagtagatgccatgacaaaccagagcagacgtagggattgtaacgcccctgctccg
gaagccggtggcaagaactgcgcgggtccactgattgaaaccagccagacacactgcaat
gtccctccatgtagtgtaggcgacgacaatgtgaccgagtggagccaatggagtgctgca
gcatgcacagccacctgtggtccaggcgaagagggaagcgtgaaaagaagcagaagttgt
attatgctggccaataatatcagctgtaaagccgcactaatagagacccaaatgggaaac
tgcggcctccctaaatgtcctgttgatggagggctgtcaaactggacatcgtggtcaatc
gtaccctgccctgtcacatgtggagtagatgtcatgacaaatcagagcagacgtagggat
tgtaacaaccctgctccggaggccggtggcaagaactgcacaggtccactgatggaaacc
agtcagacacactgcaatgtctctcgatgtagtggcgacgacaatgtgaccgagtggagc
caatggagtgctgcagcatgcacaaccacctgtggtccaggccaagagggaagcattgaa
agaagcagaagttgtgttatgccggccaatagtatcagctgtatagccacattaacagaa
acccaaatggaaaactgcggccttcctaaatgcccggttgatggagggttgtcaaactgg
acatcgtggtcaatcgtaccctgccatgtcacgtgtggagtagatgccatgagaaatcag
agcagacgtagggattgtaacaaccccgctccggaagccggtggcaagaactgcacaggt
ccgctgatggaaaccagtcagacacactgcaacgtccctccatgtagtgatgacgacgat
gttggcgagtggagccaatggagtgctgcatcatgcacagccacctgtggtccaggccaa
gagggaagcattgaaagaagcagaagttgtgttatgccggccaatagtatcagctgtata
gccacattaacagaaacccaaatggaaaactgcggccttcctaaatgcccagttgatgga
gggttgtcaaactggacatcgtggtcaatcgtaccctgccctgtcacatgtggagtagat
gtcatgacaaatcagagcagacgtagggattgtaacaaccctgctccggaggccggtggc
aagaactgcacaggtccactgatggaaaccagtcagacacactgcaatgtctctcgatgt
agtggcgacgacaatgtgaccgagtggagccaatggagtgctgcagcatgcacaaccacc
tgtggtccaggccaagagggaagcattgaaagaagcagaagttgtgttatgccggccaat
agtatcagctgtatagccacattaacagaaacccaaatggaaaactgcggccttcctaaa
tgcccagttgatggagggttgtcaaactggacatcgtggtcaatcgtaccctgccatgtc
acgtgtggagtagatgccatgagaaatcagagcagacgtagggattgtaacaaccccgct
ccggaagctggtggcaagaactgcacaggtccgctgatggaaaccagtcagacacactgc
aacgtccctccatgtagtgatgacgacgatgttggcgagtggagccaatggagtgctgca
tcatgcacagccacctgtggtccaggccaagagggaagcattgaaagaagcagaagttgt
gttacgccagccaatagtatcagctgtatagccacattaacagaaacccaaatggaaaac
tgcggccttcctaaatgcccagttgatggagggctgtcaaactggacatcgtggtcaatc
gtaccctgccctgttacatgtggagtagatgtcatgacaaatcagagcagacgtagggat
tgtaacaaccctcctccggaggccggtggcaagaactgcacaggtccactgatggaaacc
agtcagacacactgcaatgtctctcgatgtagtggcgacgacaatgtgaccgagtggagc
caatggagtgctgcagcatgcacaaccacctgtggtccaggccaagagggaagcattgaa
agaagcagaagttgtgttatgccggccaatagtatcagctgtatagccacattaacagaa
acccaaatggaaaactgcggccttcctaaatgcccagttgatggagggctgtcaaactgg
acatcgtggtcaatcgtaccctgccctgttacatgtggagtagatgtcatgacaaatcag
agcagacgtagggattgtaacaaccctcctccggaggccggtggcaagaactgcacaggt
ccactgatggaaaccagtcagacacactgcaatgtctctcgatgtagtggcgacgacaat
gtgaccgagtggagccaatggagtgctgcagcatgcacaaccacctgtggtccaggccaa
gagggaagcattgaaagaagcagaagttgtgttatgccggccaatagtatcagctgtata
gccacattaacagaaacccaaatggaaaactgcggccttcctaaatgcccagttgatgga
gggctgtcaaactggacatcgtggtcaatcgtaccctgccctgttacatgtggagtagat
gtcatgacaaatcagagaagacgtagggattgtaacaaccctgctccggaggccggtggc
aagaactgcacaggtccactgatggaaaccagtcagacacactgcaatgtctctcgatgt
agtggcgacgacaatgtgaccgagtggagccaatggagtgctgcagcatgcacagccacc
tgtggtccaggccaagagggaagcattgaaagaagcagaagttgtgttacgccagccaat
agtatcagctgtatagccacattaacagaaacccaaatggaaaactgcggccttcctaaa
tgccgaattgatggagggctgtcaaactggacatcgtggtcaatcgtaccctgccctgtt
acatgtggagtagatgtcatgacaaatcagagcagacgtagggattgtaacaaccctgct
ccggaggccggtggcaagaactgcacaggtccactgatggaaaccagtcagacacactgc
aatgtctctcgatgtagtggcgacgacaatgtgaccgagtggagccaatggagtgctgca
gcatgcacaaccacctgtggtccaggccaagagggaagcattgaaagaagcagaagttgt
gttatgccggccaatagtatcagctgtatagccacattaacagaaacccaaatggaaaac
tgcggccttcctaaatgcccagttgatggagggctgtcaaactggacatcgtggtcaatc
gtaccctgccctgttacatgtggagtagatgtcatgacaaatcagagcagacgtagggat
tgtaacaaccctcctccggaggccggtggcaagaactgcacaggtccactgatggaaacc
agtcagacacactgcaatgtctctcgatgtagtggcgacgacaatgtgaccgagtggagc
caatggagtgctgcagcatgcacaaccacctgtggtccaggccaagagggaagcattgaa
agaagcagaagttgtgttatgccggccaatagtatcagctgtatagccacattaacagaa
acccaaatggaaaactgcggccttcctaaatgcccagttgatggagggctgtcaaactgg
acatcgtggtcaatcgtaccctgccctgttacatgtggagtagatgtcatgacaaatcag
agaagacgtagggattgtaacaaccctgctccggaggccggtggcaagaactgcacaggt
ccactgatggaaaccagtcagacacactgcaatgtttctcgatgtagtggcgacgacaat
gtgaccgagtggagccaatggagtgctgcagcatgcacagccacctgtggtccaggccaa
gagggaagcattgaaagaagcagaagttgtgttacgccagccaatagtatcagctgtata
gccacattaacagaaacccaaatggaaaactgcggccttcctaaatgccgaattgatgga
gggctgtcaaactggacatcgtggtcaatcgtaccctgccctgttacatgtggagtagat
gtcatgacaaatcagagcagacgtagggattgtaacaaccctgctccggaggccggtggc
aagaactgcacaggtccactgatggaaaccagtcagacacactgcaatgtctctcgatgt
agtgttgatggagggctgtcaaactggacatcgtggtcaatcgtaccctgccctgttaca
tgtggagtagatgtcatgacaaatcagagaagacgtagggattgtaacaaccctgctccg
gaggccggtggcaagaactgcacaggtccactgatggaaaccagtcagacacactgcaat
gtctctcgatgtagtggcgacgacaatgtgaccgagtggagccaatggagtgctgcagca
tgcacagccacctgtggtccaggccaagagggaagcattgaaagaagcagaagttgtgtt
acgccagccaatagtatcagctgtatagccacattaacagaaacccaaatggaaaactgc
ggccttcctaaatgcccagttgatggagggctgtcaaactggacatcgtggtcaatcgta
ccctgccctgttacatgtggagtagatgtcatgacaaatcagagcagacgtagggattgt
aacaaccctgctccggaggccggtggcaagaactgcacaggtccactgatggaaaccagt
cagacacactgcaatgtctctcgatgtagtgatgacgacgatgttggcgagtggagccag
tggagtgctgcagcatgcacagccacctgtggtccaggccaagagggaagcatggaaaga
agcagaagttgtgttacgccggccaataatatcagctgtatagccgcactaacagaaatc
caaatgggacactgcggcctccctacatgtccaggtaagtgtctgtccatcttaaaccgt
acttgtcacctggaagctaccgttttggctggacattcttag
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