Haliotis rufescens (red abalone): 124129237
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Entry
124129237 CDS
T07893
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03015
mRNA surveillance pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124129237
09122 Translation
03013 Nucleocytoplasmic transport
124129237
03015 mRNA surveillance pathway
124129237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124129237
03041 Spliceosome [BR:
hrf03041
]
124129237
03009 Ribosome biogenesis [BR:
hrf03009
]
124129237
03012 Translation factors [BR:
hrf03012
]
124129237
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124129237
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124129237
mRNA cycle factors
Stress granule specific factors
124129237
Spliceosome [BR:
hrf03041
]
Complex C
Other components
EJC/TREX
124129237
Ribosome biogenesis [BR:
hrf03009
]
Eukaryotic type
90S particles
Helicases
124129237
Translation factors [BR:
hrf03012
]
Eukaryotic type
Initiation factors
eIF-4
124129237
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124129237
NCBI-ProteinID:
XP_046348714
LinkDB
All DBs
Position
Unknown
AA seq
399 aa
AA seq
DB search
MASRRVLPDDLRNVEFETSEDVDVTPTFDNMGLREELLRGVYAYGFEKPSAIQQRAVKPI
VKGRDVIAQAQSGTGKTATFSISILQCLDTQVRETQALILSPTRELATQIQKVILALGDY
MNVQCHSCIGGTNIGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKMLILDEADEM
LNKGFKEQIYDVYRYLPPATQVLLISATLPHEILEMTSKFMTDPIRILVKRDELTLEGIK
QFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMP
QKERDSIMKEFRSGSSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRFG
RKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcggcgtgtgctcccagacgatttaagaaatgttgaatttgaaacaagtgaa
gatgtcgacgttacacctacatttgataatatgggtcttagagaagagttgttgaggggt
gtatatgcttatggttttgaaaaaccgtcagctattcaacagagagctgtaaagccaata
gtgaaaggtcgagatgttattgcacaggcacagtctggaactggtaaaacggccacattt
tccatcagtatccttcagtgccttgacacacaggtgcgggagacacaagcccttattctc
tcacccacgagggagcttgcaactcaaatccagaaggttatccttgcccttggagattac
atgaatgtgcagtgtcattcatgtatcggaggtacaaatatcggtgaagacattcgtaaa
ctggactacggacagcatgtggtttctggaacaccaggcagagtctttgatatgatcagg
aggaggaatcttcgcacaagatctataaaaatgttgattcttgatgaagctgatgaaatg
ttaaacaagggattcaaagagcaaatctatgatgtgtatcggtacctgccaccagcaacc
caagtacttctcatctctgctacacttcctcacgagatcctggagatgaccagcaagttc
atgacagacccaatcagaatcctggtcaaacgtgatgagttgaccttggaaggcatcaag
cagttcttcgtggcagtagagagagaggagtggaagtttgacaccctgtgtgatctgtac
gacaccctcaccatcacacaggcagtcatcttctgtaacaccaagagaaaggtagactgg
ctgactgagaagatgagggaggccaacttcactgtgtcatccatgcatggtgacatgcca
cagaaagagagagattccatcatgaaggagttcagatcaggatccagtcgcgtcctcatc
acaactgatgtttgggctcgaggtattgatgttcagcaggtgtctctcgtcatcaactat
gatctgccaaacaacagagaattgtacattcacagaatcggccgatcaggtagatttgga
aggaaaggtgtggccatcaactttgtaaagaatgacgacatcagaattctgagagatatt
gaacagtactactcaacacaaattgatgaaatgcccatgaatgttgctgatctgatctaa
DBGET
integrated database retrieval system
