Haliotis rufescens (red abalone): 124129733
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Entry
124129733 CDS
T07893
Name
(RefSeq) intraflagellar transport protein 88 homolog isoform X1
KO
K16474
intraflagellar transport protein 88
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hrf03037
]
124129733
Cilium and associated proteins [BR:
hrf03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
124129733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_12
TPR_6
TPR_16
TPR_14
TPR_19
TPR_8
TPR_7
ARM_TT21_5th
ANAPC3
TPR_11
TPR_9
ARM_TT21_N
TPR_10
TPR_17
ARM_TT21_4th
TPR_CcmH_CycH
TPR_Slam
DUF2225
TPR-S
ARM_TT21_C
ARM_TT21_2nd
HAT_PRP39_C
TPR_21
Coatomer_E
Consortin_N
TPR_15
RPN7
RNPP_C
Motif
Other DBs
NCBI-GeneID:
124129733
NCBI-ProteinID:
XP_048258385
LinkDB
All DBs
Position
Unknown
AA seq
849 aa
AA seq
DB search
MVSAEGVGLHVMNRLTMMEHVHLAGEDEDDMYSGFNDYNATLDTEDLAHDENFQKAVLRT
SHGRRPPPTAKMPPGTSARLGTAARGRVGLPSSMGRPITGAIQADGQARPMTAVRAAGFT
SSGNRGVGFDPMNQAGRGPAPPLEPKPEDSPEEKIRQLEKKVNELIEESCFGNSQGELGL
ALEKAKEAGRKERVLVRQREQLSMGDQINLDLTYSVLFNLANQYAANEMFAEALNTYQVI
VKNRMFSNAGRLKVNMGNIYFRQKNYPKAIKFYRMALDQVPNTHKEMRTNIMQNIGIVFV
KMGQYNDAITSFEHIMSESPTFKTGFNLILCYFALGDRDKMRRAFQKLLTVDLKIDDEDK
YLPHGDDKQYNLVLEVIKNDALRQIEREKKYEAERCIKTAAKIISPAIEATFSIGYDWCI
EQVKNSQYIDLSHDLEIDKAIMFLKQKDFQQAIETLKSFEKKDSKVASTAATNLSFLYFL
HKEETDLAQADKYAEVAMTADRYNPAALVNKGNVLFAKRDYEKAREFYKEALSNDSSCVE
ALYNLGLSNKRLGRLEDALDCFYKLHAILRNSPQVMYQIADIHDQLDDSAQATEWFMQLL
GVTPSDSSILARMGELYDNEGDKSQAFQYYYDSYRHDPSNIPVIEWLGAYYIDSQFCEKA
IHYFERAAIVQPNQVKWQLMIASCHRRSGNYQQALETYKQIHRKFPDNVECLKFLVRLCT
DMGLKEAQDYATKLKKAEKAKELRDQRATSGTRRGSGRGRREGSAGSDREGSGSGHRKEK
GRQRGDRKRPTFDEEEENPYQSGQKQDIDATYSDPLGPQIERPKTAARRKDAMEDEFGDE
ELGDDMLPD
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggtaagtgcagaaggtgtgggcctacatgttatgaatcgtctcactatgatggaacat
gtacatctcgcaggtgaagatgaggatgatatgtactctggcttcaatgactataatgcc
actttagacacagaggatcttgcacatgacgagaatttccagaaagctgtactaagaaca
agccatggcaggaggccgccacctacggctaagatgccacctggaacctcagcccgtctt
ggcacggcagcacgaggcagggtaggcctgccatcctccatgggtcgaccaatcacaggc
gccatacaggctgatggacaagctcgaccaatgacagcagtgcgggcagcaggattcaca
tcgtctggcaacagaggtgttggatttgaccccatgaatcaagcagggcgtggcccggcc
cctcccctggaaccaaaacccgaagacagtcctgaggagaagattcggcagttggagaag
aaggtcaatgaactgatagaggaaagctgctttgggaacagtcagggtgaactagggctg
gcactggagaaagcaaaagaagctggcaggaaggaacgtgttctggtccgacagagagag
cagctttctatgggagaccagatcaacctggacctcacatattcggtgttgttcaatcta
gctaaccagtacgcagccaatgagatgtttgctgaggctctcaatacctaccaggtcatt
gtcaaaaacaggatgttcagcaatgctggtcggcttaaggtcaacatggggaatatatat
ttccgtcagaagaactaccctaaagccatcaagttctatcgcatggctctcgaccaggtg
cccaacactcacaaggagatgagaaccaacattatgcagaacatcggcatcgtgtttgta
aagatgggccagtacaacgacgcaatcacatcgtttgaacatatcatgtccgagtccccc
acattcaagactggcttcaatctaattctgtgctacttcgcgctgggggatcgcgacaag
atgaggcgggcatttcagaagctccttacagtggatctgaagatagatgatgaagataaa
tacctacctcatggggatgacaagcagtacaacctggtgctggaagtgatcaagaatgac
gctctgcggcagatagagagggaaaagaagtatgaggcggagcggtgcatcaagacagca
gctaagattatctcccctgctatagaggccaccttctctattggatatgactggtgtatc
gaacaagtgaagaactcgcagtacatcgacctatcccatgatctggagattgacaaggct
atcatgttcctcaaacagaaggactttcaacaggcaattgagaccctcaagtcgtttgag
aagaaggactccaaggtcgccagtacagctgccaccaatctgtccttcctgtacttcctg
cacaaggaggagactgatttagcccaagctgataagtacgctgaggttgccatgacagca
gacagatacaaccctgcagctctggtaaacaagggcaatgtgctgtttgcgaagcgagac
tacgaaaaggcaagagagttctacaaagaggcgttgtccaacgattcgtcttgtgttgag
gccctgtataatctaggtctgagtaacaagcgcctcggacgactggaggatgccctggac
tgcttctacaagctgcatgccatcctgcgcaacagtccgcaggtcatgtaccagattgcc
gacatacatgaccagcttgatgactcagctcaagcaactgaatggttcatgcagttgcta
ggggtgacaccgtccgactccagcatcctcgccaggatgggggaactgtatgacaacgaa
ggggacaagtcacaggctttccagtactactatgattcctaccgccatgacccgtccaac
atcccggtcatcgagtggctgggggcctactacattgactcccagttctgtgagaaggct
atacactacttcgagagagcagctattgtacagccgaaccaggtgaagtggcagctgatg
attgcaagttgtcaccggcgaagtggcaattaccagcaggccttggagacatacaaacaa
atacatcgcaagttcccagataatgtagaatgcctgaagttcctggtgcggctgtgtaca
gacatggggctgaaggaggcccaggactacgccaccaagctgaagaaggccgagaaggcc
aaggagctgcgagatcagcgagctacaagtggtacacggagaggaagtggtcgtggaagg
cgagaaggtagcgcagggagtgatcgtgaaggtagtggtagtggtcatcgcaaggaaaag
ggccgacagcgtggggacagaaaacgtccgacatttgacgaagaagaagagaatccttac
cagtctggtcagaaacaagatatagatgcgacctatagcgaccccctgggccctcagatt
gagcgaccgaagaccgctgcccggcgcaaggatgcaatggaggatgagtttggtgatgaa
gaactgggagatgacatgttgccagactag
DBGET
integrated database retrieval system
