Haliotis rufescens (red abalone): 124131276
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Entry
124131276 CDS
T07893
Name
(RefSeq) neogenin-like isoform X1
KO
K06766
neogenin
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124131276
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrf04515
]
124131276
Cell adhesion molecules [BR:
hrf04515
]
Immunoglobulin superfamily
DCC/UNC5 family
124131276
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
fn3
I-set
Ig_3
Neogenin_C
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
Interfer-bind
V-set
Ig_Rha78A_N
Fn3_R-PTP-O
Ig_RIMBP2
C2-set_2
NDNF
Tissue_fac
V-set_CD47
Ig_4
Protocadherin
TMEM154
Motif
Other DBs
NCBI-GeneID:
124131276
NCBI-ProteinID:
XP_046350389
LinkDB
All DBs
Position
Unknown
AA seq
1424 aa
AA seq
DB search
MANCFAEKLTGVSSWMRIYLSLQTALALVGATVPHFSQFYFTVEPHDLIVKKGSKSLLNC
SAYHGETTPNIQWMKDGNYLNFENSDRSLLANGSLYFNQVQHSKTAHPTDKGTYQCTATV
DGFGTIVSRKADLDIAYLSKHFIKEPEDLVVYLGDTAMFSCEIEGVPHPKVRWIKAGRAL
AKADNIYQYDDGILEIYPVRFADFGAYSCEAKNMERSRTSRVASLRQNPNTNIEEGVAPE
FVMRPKDHRADYGTTVVLHCGANGRDVKEETPTIKWLKDGVTIALANTKSARIKKVGSGS
LQITTLKESDGGVYTCRAVNQEDSIDADTMLTVLVPPRFVKRPANVFAHTNSDVKFECNI
YGVPNPRITWLKNGDVLFPSDYFQIVDGKDLKILGLVNSDDGIYQCFGANDLGNVQASAQ
LVILQPDVPLPTTPSLYPLIHPGALHADAKNLPTAPINLRAVLVSTRFVTLSWQPPAGSI
PSDIIAYSVFWQEKGSERERVTNTTTTEANIQHLKPHTEYEYRVIAYNRFGASRQEARIT
VTTDQEVHVPSPPVNLRAVAMTPTSIKVNWNPPVESKGRISHYVLIYYEVGSDSEKEVSV
YTTEHVLKKLKKFREYSLRVVAHNQNGPGMSTEEFVSKTFSDEPSAAPQNFTLEVSSATR
IIVRWEPPALDNRNGIITGYKIRYKRRGTKQGKTVTTDGNRNNYALTELRKGTEYQVRIS
ALTVNGSGPATSWEHVTTYRDDLSENQVPPRPARLSVKPRANSIIVTWAPPPSDSKILVR
GYVLGYGKNLPDVYRSTFDANTHDYTIQNLQPVSEYVISIRAFNKEGEGEVKYETVTTME
ETKEPATPMMPPIGLKAIVLSPSTIVLTWADNTLGKSQKITDNRYYTVRYTPLPSHNRRP
RQLNSTDLNAHVDGLKPNTQYEFSVKVIKGRRQSTWSMSVINTTQESAPGSEPRDLTPVA
VEGNPLSVTLNWQPPQKPNGLITGYLIFYTTDSNQADRDWVLEGVVGDRLSTVISDLTPD
TTYYFKVQARNRKGYGPMSETKIYKTPKMDRAAMTDSDEQGGLSMNIIIIIIAVAVGIIF
CIVIIVVGVLLCKKRDAQRQDIRSYKSPNKPLKGMPKDVKPPDLWIHQPNHMEMGKMDKS
QRSESNMSVATSTLRRSSRGSSDRLDEFPPGLDIMDKRRNSFVGESGYPSSGEERYQPAH
QRSIVRPKPITIPVDAQPLQKEPVATVTALPNGHITQMIDPRDVGGHPMRPVYPRTQYNT
QYTSTPRVNAGDIPQSSSSPISPESPTQYDQQANTFAESTSGVVSSEALKVSLGRTPNPL
RSFALPGPPSPGATPPRHIVKPQPNLSPYKKPTPPITTGPIKSRSPLPLITSKAPDVTLK
AGKSGKEDNGMEKSLSTEELTAEMANLEGLMKDLNAITQQEFEC
NT seq
4275 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactgcttcgctgagaaactcaccggagtttcatcgtggatgaggatttacttg
agtctacaaacggcccttgcgctagtcggagccacagtcccccacttcagtcagttttac
ttcaccgtggagccgcacgacctgatcgtgaagaaaggctccaagtcgctcctcaactgt
tccgcctaccacggcgagaccacccccaacatacagtggatgaaagatggcaactactta
aattttgaaaattcagatcggagtttattagcaaatggatctttatatttcaaccaagtc
cagcattctaaaacagcccatccaactgacaagggcacctaccagtgtacagccactgtc
gatggatttggaaccatcgtcagtcggaaagctgatctggatattgcatacttgtcgaaa
cattttataaaagagcccgaggacttggtggtgtatcttggagatacagccatgttttct
tgcgagattgaaggggtaccacacccgaaagtcaggtggataaaagctgggagagccctc
gcaaaagcagacaatatataccagtatgatgatggtattttagaaatatatcctgtgaga
tttgcagacttcggggcctatagctgtgaagctaaaaatatggagaggtctcgaacgagc
cgagtagcctcactacgtcagaaccccaacacaaatatagaagaaggtgtcgctcctgaa
tttgtgatgaggcccaaagatcatcgtgcggactacggaacgactgttgttctccactgt
ggcgccaacgggagggacgtgaaggaggagacacccacgataaagtggctgaaggatgga
gtcaccattgctttagcaaacaccaagagtgcaaggataaagaaggttggcagtggaagc
ctgcagatcacaacgttgaaggagagtgatgggggcgtctacacgtgtcgggctgtcaac
caggaagacagcatcgatgcagacaccatgttgacagtattagttcctcccagatttgtg
aagaggccagccaatgtatttgcccacaccaattccgatgtcaaatttgaatgcaacata
tatggagtgcctaatcccagaatcacttggctaaagaacggcgatgtgctctttccaagt
gactacttccaaatagtcgatggcaaagacttaaaaatacttggcctcgtaaattcggat
gacggcatttatcagtgttttggtgcaaacgacctcggcaacgtacaagcgagtgcgcag
cttgtgattctgcaacctgacgtccccctccccaccaccccctctctgtaccccctcatt
catccaggagctcttcacgccgacgccaagaacctacccaccgcgcctatcaacctccga
gccgtcctggtgtccactagatttgttacgttgtcatggcaaccgccagcggggagcatt
ccatccgacatcatcgcctactccgtattctggcaggaaaaaggatcagaaagggagcgt
gtgaccaacacgacaaccacggaggcgaacatccagcatctgaagccacacacagagtac
gagtaccgcgtgattgcctacaaccggttcggggctagtcgacaggaggccaggatcacc
gtcactactgaccaagaagtgcatgttcctagcccgcctgtcaacctccgagccgtggcc
atgacccccacctccatcaaggtcaactggaaccccccagtggagagcaagggccggatc
tcccactacgttctcatctactacgaggtcggctcggactccgagaaggaggtgtcagtg
tacaccacagagcatgtcctcaagaaactcaagaagttccgcgagtacagcctccgagtg
gtggcgcacaaccaaaacggtcccggaatgagtactgaagaatttgtgtcaaagacattt
tcagacgaacctagtgccgcgccccagaacttcactctggaggtatccagtgccacgagg
atcattgtccgatgggaaccgcctgccttggataaccggaacggaatcatcaccggctac
aagatccgctacaagcggcggggcaccaagcagggaaagaccgtcaccacggacggaaac
agaaacaactacgcactcacagagctgcgtaaggggactgagtatcaggttaggatctcg
gctttgaccgtcaatggatcgggtccagccacgtcctgggaacacgtgaccacctaccga
gatgacctatcagaaaaccaagtaccacctcggcctgcacggttgtctgtgaagccacgg
gctaactccatcatcgtcacatgggcgccgccgccatccgactccaagatcctggttcga
ggctatgtgttgggatatggcaaaaatctccccgatgtgtaccgctccacgtttgacgcc
aacactcatgactatacaatacagaatctccagccggtgtcggagtatgtgatttctata
agagcattcaacaaagaaggagaaggagaagtgaaatatgagacagtcaccacaatggaa
gagacaaaggaacctgccacgcccatgatgcctccgattggtctcaaggccattgtcctg
tccccgtcgaccattgtgttgacatgggcagataacacccttgggaagagtcagaaaata
acggataacagatattacactgtgagatacacaccgctacctagccacaaccgtagaccc
aggcagctcaactccaccgatcttaacgcccatgttgatggtctcaagccaaacacacag
tatgagttctctgtcaaggtcatcaaaggtcgccgacagagcacgtggagtatgagtgtg
atcaacactacgcaagaatcagcgcctggttcggagccgagagacttgaccccagtggct
gtggagggcaaccccctctctgtcacactcaactggcaacccccccagaaaccaaacggt
ttaatcacagggtacttgatattttacacaacggactccaaccaggccgacagagactgg
gtgttggagggcgtggtcggagatcggttgtctactgtgatcagtgatctcaccccggac
acgacctactatttcaaggttcaagctcggaatcggaaaggctatggaccaatgtcggaa
accaagatctacaaaacaccaaaaatggacagagcagcgatgacggattccgacgaacag
ggtggcctgtccatgaacatcatcatcatcatcattgcggttgccgtgggaataatattt
tgcatcgtcatcatcgtggttggtgttctgctgtgcaagaagcgtgacgctcagcgccag
gatataagaagctacaagtccccaaacaagcccctgaaggggatgcccaaggatgtgaag
cccccagacctgtggatccatcaacccaaccacatggagatgggcaagatggacaagtcc
cagcgcagcgagtccaacatgtccgtcgccaccagcacgctacgtcggtcatcgcgaggc
tcctctgaccggctggacgagttccctccagggctggacatcatggacaaacggagaaac
tcttttgttggagagagtgggtacccctcgagtggggaagaaagataccaaccggcacat
cagaggagcatcgtccgtccgaaacccatcaccatcccagtggatgcacagcctctacag
aaagaaccggttgccacagtaacagcattaccaaatggtcacattacccaaatgattgac
ccgcgagacgtcggaggtcatcccatgcgacctgtgtaccctcgaacccagtacaacact
cagtacacttcaacgccccgcgtcaacgccggagatatacctcagtcaagctcaagccct
atctcacctgaatcaccaacccaatatgatcagcaagcaaacacattcgctgagtcgaca
agtggggtggtctcgtcagaggccttgaaggtttcactggggcgcacccccaacccgctg
cggagttttgctctccctggccccccttccccaggagctaccccacccagacacatagtt
aaaccacagcctaaccttagtccttacaagaagcccactccgcctatcacgaccggaccc
atcaagtctcggtcacctctcccactgatcacctccaaagcaccggacgtgacgctcaaa
gcggggaaatcgggaaaagaagacaatggcatggagaaatctctgagtacggaggagctg
acggcggagatggcaaacttggaaggcctgatgaaagatctgaatgccattacacaacag
gagtttgaatgctaa
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