Haliotis rufescens (red abalone): 124132288
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Entry
124132288 CDS
T07893
Name
(RefSeq) uncharacterized protein LOC124132288
KO
K04988
polycystin 1L2
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hrf04040
]
124132288
04091 Lectins [BR:
hrf04091
]
124132288
Ion channels [BR:
hrf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124132288
Lectins [BR:
hrf04091
]
C-Type lectins
Others
124132288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
Polycystin_dom
PKD_channel
Ion_trans
PLAT
PKD
PKD_4
Motif
Other DBs
NCBI-GeneID:
124132288
NCBI-ProteinID:
XP_046352099
LinkDB
All DBs
Position
Unknown
AA seq
2970 aa
AA seq
DB search
MSPCVSIYRLLCLFFLGFQVIQTGGFLVDDVAITIGNNKPQTTEDPGIKVTMASAAQLPM
GNLTGWHTCTAGETQEALDLSGLTAGGEVAIPCVCDTQTNKTVTVNVSTELNSTQETFEI
YCWDMLNITITLDKDLQPTNEVIPFNIKNVPNYGIQWNIDACENNTLTSTAASNYGSRYS
ANPVDLSSITYTQPGSCTLHATFWNELYRKDVELTFELGVGVADLTVVPSARDLLIGETF
TLTVNATGPNISWVVTFFNATILQEGSAGVFAEQNASTTGVYTFGIIASNRVNNKSKSFD
ISVVHPINGYNVTVTPPTIQSNENLEINVALDALANIPMGTLEITISPCGNAEFRDVLPV
SAGATNKFNCKFIKQGNYSIDVTISSAVSSENFTFEAVVCDNLTITIDVDKTAWAVGEPV
IVNMNTLPTSGFKYRVDMGDGTSIHSNEADSVLVSLNTFTAIPAQLYNTPGTYTVSLYAY
NQCYSVSSSVVLVVEYKIPPCNLVIVPNRKIMTPDDTTTFSFVTQSGTTADNPTNVTCTW
NLGDGTPVTDQLTEMDFSSRSTGYVITHDYTTAEGTVNYQINCENRVSNARFNATVDVVI
VRAADFSVTFEPVTPLPEGTCTNFDFKLSFHDIPKVPNDVNYTVNYADGDEVIEKVLSVY
AVSKKLCKRGVYKGEITIIYDGVKAVKNLTYSLAYCSVTLEGSAIIGFVNTTSFLFVVLN
HLFMENITVSIDWKDGSTSDVVLAGGASRTVSHPFITHGYMTPFYSVNTTRGRDSASLEE
KLYLTYPAEDFELELPEFLLVGEMFAPIILYVGPDTLENISCTITFNSTANETLATRNFL
PSDNSATSTEHKYVFKQYELMKVVCQNSLSVSIKNYSRMVFSECFQAPDMFESIHREEKR
PMRANTASLPTLTARVKLADKCKNTTVFVFTWIFQKKNTLTGQFEPYDIETPNNISMNLA
NSTIKEGTYTVNLTMRLQEKEEDYLEDQQYLEIVNPPLVCSIVGGVFTLIGQGEILVLDA
ETNSYDPLDGIVRDVSREDTKHKTSTLNFSWACYAVDCGDTEAYMVPKNTDRSYRDKPQC
NLTLRNEGYIKVDTAIGFENGKCYVFEQTLSKDNRKATAIKVVRLEQKKPCPIDIICLKN
CMEKITPEEPTAFRVLTGSVKPVAAKFNWTLSKYDQSNADYSELSSADKKFKREPSDQLF
ELEPNYFTPGGVYKLQITADIQDRPQSIAFRVLLVNEKPRGGTCKITPTEGVALQTRFKI
LCDGWMDEGMREETDDAIDIKEPLKLKIIQDGNLIRSTDFTRKLSQPSVDLKAGPEPDFE
TEVKLVVTDAFGGQVEFTETVKVNNSMPPVPKFGIAASTLNKEEEEKQKKDFTDFLETIK
YDVRFSAGKGAPLDTAVIASTVAKSLNTANFTTVTTEDVQKVGSEDADFDISLILEAGTT
YNSIKENIKEVNEKFVESLTQAIDAELEMMKTTRQTLSADSITLLSESLATEVANPELLN
TVTTEAAGKRLVALASNMMDVYNSTLKTVDVENMTHAVGSLLSSIIHCNKQYAITGVEVE
SSYNDSEHAGAEADELNAAERKYLKDLLKRKKQLKLDRANETLKENINSIMEAVSNMLKM
ASVLVFENSSSQVEQNAFIQYVKKNTASVLQNDPQGVNGSTLTVATVETEDNDEIIDSNL
IVLKENPFVVGGNAKLVEHRVTVASMTRKDGKKLRLRGAVTTQDDPEDPPFEYFDEPKFT
PNDPAKMLYHRFAYRSVSEQVCIRIIPMNDSVCYDEYLRASLRPTISVYDHHAKNITGHR
EYCAPAGSCTKTGLCWLGIRPFLCQEPELPELSRQRREAAVNDTSVTNTINNTIVTNTIT
GTSVTNAINDTAMLLTPYSLRILNIACLSWKGSDWDAAECTVKRDPDNKKTMCMCGDKEE
LITTVSFHLAPNVIDFNTVFSKFDINGQGAVLGTVLVCFVLFVIFLFWARYMDGQDVLQW
GVTLLADNHKCDSYFYLITVHTGMVRGAGTKSNIHFCIAGEDNDTGVRILSDGVRKELKT
GSTMHFLMAVPEGLGLLQYFRVWHDRIGDSTSWYLNRIEVTDLQTAYKADFLCYQWLSLE
EGVLEKAIPVSSTENMKTFKTMFFEHARHHVTDDHLWVSVLLRPIKSHFSRGQRVGCCFT
LLMLTMITNAMFFKTNSVKRHQTSDFKIGPISFSLRQIYVSFASTIIVAVPVFFIMLLFR
KSKLSEKATKDATRLWIPHCFRNFNFYKQSKAIEKIMAIRDIVDDQDGVLPHFCVYISWV
FAFICVFLSAFFIMLYSMEWGKDISEEWLMTFIMSFFESLIILDPVKVLVLAIMFAMLLK
TLKASKPSQIDLNHIGRMNREMGQHGTDRSRLDYESPFSQEELQRATMQCRRRTMIRKVI
QELLANSFFLWLLASISYSNRDPHGFHLHQNIKNTFIEPFKPAITLERVNTTAHYFQWLE
KTVIPNLFPQMDFDNKTKLSPNMRYRISDLTNLRIGAPRLRQVRQANKTCKIPYVGETLC
HPMYDLATEETRNWCQGWQPPKCPNEEAVSVTSNAWTFVSALDIWGLPITGKRTVYGGGG
YIVELDITKEVAEQVYNNIYKYRWVDSDTRAVFLEFTLYNPSISLFCYVSILVEYPESGG
VLESTYIFPFRKLSHDGSFGKYILFCEVAFIIFTMIWLGYITFKLMKDRWSFFKEFWNVV
ELVSVIFSFVAVVLYLTRLKYTNEAMALLKENKRVFINFYHIAVWDSILNCVLGFLVSIA
TLRLLRVMSYTRVTQIVFLVLKESSKTLPGFFFYILLVLFAFGIMGQVMFGANAVAYKDM
LTTMETLFSGVLGNAGLRNTNVPVSDSWISLVYFVSFVLIVFFGLSNMFITILLDTMSLI
GDDPKNLTFKEIELFAYMWESLKTRIKGKDTSKQLPDPVLTNTQQPAMDFRDVWPQNEHE
LEGRTCCKSSTSQHDLNGTLIKKNESESEI
NT seq
8913 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccttgtgtttcaatttacagacttttatgtcttttttttcttggatttcaagtg
atacagacaggaggattcctcgtcgacgatgtcgcaataactataggtaataacaaacca
caaactaccgaggacccaggcatcaaggtgacgatggcgagcgcagcacagttaccgatg
ggtaacctgacaggatggcacacctgtacagctggcgaaactcaagaagctcttgatctc
agtggtcttaccgctggtggcgaggtagctattccgtgtgtttgcgacactcaaaccaac
aaaaccgtcaccgtcaatgtgagtacagaactgaactccacccaagaaacgttcgagatc
tattgctgggacatgctaaacataactattaccctagataaggacctacaacccacgaat
gaagtcataccatttaatattaaaaatgttcccaattatggaattcagtggaatattgat
gcatgcgagaataacacactcacaagtactgcagcatcaaattatggcagccgttactca
gctaaccctgtggatctaagcagcatcacctacacacaacctgggagctgcactcttcat
gcaacattctggaacgagttgtacaggaaggatgttgagctaaccttcgaactgggtgta
ggagtggcggatcttacagttgtaccaagcgcacgggatctgctgataggagaaacattt
actttgacggttaatgcaacaggccccaacatctcttgggtggtgaccttcttcaatgca
acgatactgcaggagggttccgcgggagtatttgctgaacagaatgcatcaactacaggc
gtatacacctttggaatcatcgcatctaacagggtcaacaacaagagcaagtcatttgat
atttcagttgtacatccaattaatggctacaacgttacagtgacaccacccacaatccaa
tccaatgagaacttggaaatcaacgtggctcttgatgcgttggcaaacataccgatggga
actctagaaattacaatatcaccttgtggtaacgcggagttcagagatgtattgcctgtc
tcggctggtgctacgaataaattcaactgcaagttcataaaacaaggtaactactctatt
gatgttacaatatcatctgcagtttcttcagaaaactttacattcgaagctgttgtctgt
gacaacttgacaataaccatcgatgtagacaagactgcctgggctgttggagagccggtg
attgtcaacatgaacactttacccacgtcaggcttcaaatatagagttgatatgggtgat
ggtacgagtatccactcaaatgaggcagattcagtgttggtcagtttgaataccttcact
gcaatcccagcgcagttgtacaacactccaggaacatacacggttagcctttatgcatat
aaccagtgctactctgtatcttcatctgtagttcttgttgttgaatataagatccctcct
tgcaacttagtgatcgtaccaaaccgaaaaataatgacaccggatgacacaacaaccttt
tcatttgtgacacaatcaggaacaacagctgacaacccaactaatgttacatgtacatgg
aatctgggtgatgggacacctgtgactgatcaactcactgaaatggatttcagttcacgt
tcaacgggctacgtcataacacacgactacactactgcagagggaactgtgaactaccag
ataaattgtgagaatcgtgtcagcaatgcacgctttaacgcgactgttgacgtggtgatt
gtgcgggcagcagacttttctgttacctttgaacctgttacacccttgcctgaaggaaca
tgcactaattttgatttcaaactttcctttcatgatataccaaaagtgcccaatgatgtg
aattacactgtgaattatgccgatggtgatgaggtaatagaaaaagttctttctgtatat
gctgtgtcaaagaaactttgtaaaagaggggtgtataaaggtgagattactattatatat
gacggtgtaaaagctgtgaaaaacctgacctattctttggcatattgctctgtgacgtta
gaagggtctgcgataattggatttgtcaatacaacatcatttcttttcgtggttcttaac
catttgtttatggaaaacattactgtttcaattgactggaaagacggaagtacttctgac
gtggtcctggctgggggtgcatctcgcacagtgtcacacccgttcattactcatggctac
atgacgccattctatagtgtcaatacaaccagggggagggactccgcctcactggaagag
aaattatatttaacgtaccctgcggaagattttgagcttgaattgccagaatttctactc
gttggtgaaatgtttgctccaataattctctacgtcggacctgacactttggaaaatatt
tcttgcactataacatttaattcaaccgccaatgaaactttggcaacacggaacttccta
ccatctgataatagtgcaacatcaactgagcataagtatgttttcaagcagtatgaatta
atgaaagttgtttgtcaaaattcactcagcgtcagcattaagaattacagccgcatggtg
tttagtgaatgcttccaagctccagacatgtttgagtcaatacatagagaggaaaaacga
ccaatgagggcgaacacagcttcacttcctacactcacggctcgtgttaagttagcagat
aaatgcaagaacacaacagtgtttgtgtttacatggatattccagaaaaaaaacacattg
actggacaatttgaaccctatgatatagaaactccgaataacatatccatgaacctcgcc
aactctactatcaaagaagggacttacacagtgaatctcacgatgaggcttcaagaaaag
gaggaggactatttggaagaccaacaatatcttgaaattgtcaaccctcccctcgtctgc
agcattgttgggggtgtgttcactttgataggacaaggcgaaatacttgttttagatgct
gaaaccaattcgtatgatcccctcgatgggatcgtacgagatgttagcagggaagacaca
aaacacaaaacaagcactctcaacttctcttgggcatgttatgctgttgactgtggagac
actgaagcatacatggttcccaagaacactgacagaagttatagagataaaccacagtgt
aatcttacattgcgtaatgagggttacataaaggtggacacagcgattggctttgaaaat
ggaaaatgttacgtatttgagcagacactcagcaaggataatcgcaaagcgacagcaata
aaagttgtacgtttggaacagaagaaaccctgtcctattgatattatatgcttgaaaaac
tgcatggaaaagatcacaccagaggaaccaacagcgttcagggtactcactggcagtgtt
aaaccggttgcagcaaagttcaactggacactttctaagtatgatcaatcaaatgcagac
tacagcgaactttcgtcagccgacaagaagttcaagcgtgaaccgtctgaccaactgttt
gagttggaacctaactatttcacgcctggtggcgtgtacaagctacagattacagccgac
atacaggaccgacctcagagcatagccttcagagtcttactggtaaatgaaaaaccaaga
ggtggaacttgtaaaataacaccaacagaaggtgtggctctacaaacaagattcaaaatt
ctttgtgatggatggatggatgagggtatgcgggaggaaactgatgatgcgattgacatc
aaagaaccactcaagctgaagattatacaggatggtaacctcatccgatcaacagatttc
actcgcaaactgtcacaaccttccgtcgacctgaaggctggtcctgagccggatttcgaa
actgaggttaaactggttgttactgatgcgttcggtggtcaagtcgagtttacagagacg
gtcaaggtgaataacagcatgccgccggttccaaagtttggaatagctgcttcaacgctt
aataaagaagaggaagaaaaacaaaagaaagatttcactgacttcctcgaaacaatcaaa
tatgatgtcagattctcagctggtaaaggcgcccctcttgacacggctgtaatcgcatca
accgtcgcaaaatcacttaacactgctaatttcacgaccgtaacgactgaagatgtgcag
aaggtcggcagtgaggacgcagattttgatatatctctgattcttgaggcaggaacaact
tataactctatcaaagagaatataaaggaggtgaatgagaaattcgttgagtccctcaca
caagcaattgacgccgaacttgaaatgatgaagacgacgaggcagactctctcagcggac
tccatcactctcctctccgaaagtctggccactgaagtcgctaatcccgaactcctcaac
acagtaacgactgaagcggccggcaagaggctcgttgccctcgcatcaaatatgatggac
gtttacaactcgacgctcaaaactgtagacgtggagaacatgacacatgctgtggggtcg
ttgctcagcagcatcatccactgcaacaaacaatacgccatcactggtgtcgaggttgag
agctcatataacgacagcgaacacgcaggtgcagaggcagatgaattgaatgctgctgag
aggaagtatcttaaggatctgctgaagcgcaagaagcagctgaaactagaccgggctaac
gaaacgttaaaagagaatatcaacagcatcatggaggctgtaagtaatatgttaaaaatg
gccagtgtattggtgttcgaaaattcctccagtcaagtggaacagaatgcatttatccaa
tatgtcaagaaaaatacggccagtgttcttcagaacgaccctcagggcgtcaacgggtct
accttgactgtcgccacagttgaaacagaagacaatgatgaaattatagacagcaatttg
atagtcctgaaggagaacccctttgtcgtaggagggaatgctaagctggtggaacaccga
gtgacagtggctagcatgacgagaaaggatggcaagaaactgagactccgaggggcagtg
accacacaggatgatcccgaagacccgccctttgagtattttgatgaaccaaagtttaca
cccaatgatcctgcaaaaatgctataccaccggtttgcttacagatcagtgtctgaacaa
gtctgcattcgtatcattccaatgaatgattcggtttgttatgacgaatatctcagggca
agtctgcggccgacgatttcggtgtatgatcaccatgccaagaacatcactggccaccgc
gagtattgtgccccggcaggatcctgcacgaaaacaggcctatgctggctcgggatcaga
cccttcttgtgtcaagaacccgagcttccagaacttagccggcaaaggcgagaggcagcc
gtcaatgatacaagcgtcacaaacaccatcaataataccatcgtcacaaacactatcact
ggtacaagcgtcacaaacgccatcaatgataccgcgatgctcctcacgccatactctctc
cggatcctgaatatagcctgcctcagctggaagggatcagactgggatgctgctgagtgt
acagttaaacgagaccctgataacaagaagaccatgtgtatgtgcggtgacaaggaagaa
ctcatcaccaccgtttccttccacctcgccccgaacgtcatcgactttaacactgtcttc
agcaagttcgacatcaatggccaaggtgccgttctgggtacagttcttgtctgcttcgtg
ctcttcgtgatcttcctgttctgggcacggtacatggatgggcaggatgtgctccagtgg
ggcgtgacattgttggctgacaaccacaagtgcgatagctacttctacctcattaccgtc
cacactgggatggtcagaggggccggtacaaagtccaacatacatttctgtattgctggt
gaagacaatgacacgggcgttaggatactttcagacggcgtaagaaaggaactgaaaact
gggagcacgatgcacttcctgatggctgttcctgagggccttggcttactacaatacttc
cgggtgtggcatgacagaataggggattcaacatcctggtacctcaacaggatcgaggtc
accgatctccaaacggcttacaaagcggacttcctttgctaccaatggctgtctctagaa
gaaggagtactagaaaaggctataccagtatcctccacagaaaacatgaagaccttcaag
accatgttcttcgagcacgcacgtcaccatgtgaccgatgaccacctgtgggtgtctgtc
ctcctccgaccaattaagagtcatttcagtcgaggtcagagagtcgggtgttgcttcact
ttgcttatgttgacaatgatcacaaacgccatgttctttaaaacaaacagtgtaaaacga
caccaaacgtcggattttaaaattggcccaatcagtttcagtctgaggcagatatacgtc
tcgtttgcttcaaccatcatcgtagctgtcccagtcttctttatcatgctcctgtttaga
aagtcaaaactaagcgaaaaggccacaaaggatgcaaccagactatggataccccactgc
ttccggaacttcaacttctacaaacaatccaaggccattgaaaaaatcatggccatcagg
gacatcgttgatgaccaagatggtgtcctgcctcacttttgcgtgtacatctcctgggta
tttgctttcatctgtgtcttcttatcagccttcttcataatgttgtacagcatggagtgg
ggcaaggacatttcagaagaatggctgatgacctttatcatgtctttcttcgaatcgctc
atcattttggaccctgtgaaggttcttgtgctggcgattatgtttgccatgttgctgaag
acactgaaggcaagcaaaccatctcagattgacctcaaccatattggcaggatgaacaga
gagatgggccagcatggaacagatcggtctcggctcgactacgaaagtcctttctcacaa
gaagaactccaacgtgcgacgatgcaatgtcggcgccggaccatgatcaggaaggtgatt
caggaactgctcgctaacagtttcttcctctggcttctcgccagcatcagctacagcaac
agagacccccacggattccatctccatcagaacatcaagaacaccttcatagagcccttc
aaaccggctattacattggaacgtgtgaatacaaccgcgcattacttccaatggctcgag
aaaactgttatccccaatctcttccctcagatggattttgataataaaacaaaactatct
ccgaacatgcgatataggatttcggatctgacgaacctacggataggagcacctcgactg
cgccaagtgagacaggcaaacaaaacttgcaaaataccatacgttggcgaaactctgtgt
caccctatgtatgacctggctacagaagaaactaggaactggtgccaaggctggcagcca
cctaagtgtcccaacgaggaagctgtttctgtcaccagcaatgcatggacgtttgtttca
gccttagacatctggggccttcccatcacaggcaagaggacagtctacggcggaggaggt
tacatagttgaactggatattaccaaagaagttgctgaacaggtatacaataacatatat
aaataccggtgggttgatagtgatactagagctgtattcttggaattcacactgtacaac
ccaagcataagcctcttttgctacgtctcgatacttgtcgagtaccctgagagtggaggg
gtcctcgagtcaacatacatatttccgtttagaaagctcagccacgacggaagctttgga
aagtacattctcttctgtgaagtcgcgttcatcatattcacgatgatatggctggggtac
atcacattcaagcttatgaaagaccgatggagcttcttcaaagagttttggaacgttgtc
gagctggtcagtgtcatcttctcattcgtggctgttgttctgtacttaactcgtctcaaa
tacaccaacgaagccatggccttgttgaaagaaaacaaacgcgtcttcatcaacttctac
cacatcgcagtatgggacagtatcttaaactgtgtccttggtttcctggttagcatagca
acactccggctgctgagagtcatgagctatacaagagtcacacaaattgtattccttgtt
ttgaaggagagttcaaagacactgccaggcttcttcttctacatcctccttgtcctgttt
gcgtttggcattatggggcaagtcatgttcggcgcaaacgcagttgcctacaaagatatg
ctcaccaccatggaaaccctcttttccggtgtgcttggaaacgcaggccttcgaaacacc
aacgttcctgtcagcgattcctggatatcactcgtctacttcgtgtcctttgtccttatc
gtcttctttggcctgtccaacatgtttataacaattctactggacactatgtccctgatc
ggtgacgaccccaagaacctgactttcaaggaaattgaactgttcgcttacatgtgggag
tctcttaagactcgcatcaaggggaaggacacatccaaacaactacccgacccagtgttg
accaatacacaacagccagctatggactttagagacgtatggccacaaaatgaacatgaa
cttgaaggacgcacttgctgcaagagctcaaccagtcaacatgacctgaatgggaccttg
ataaagaaaaacgaaagcgaaagcgaaatctaa
DBGET
integrated database retrieval system
