Haliotis rufescens (red abalone): 124132647 Help Entry 124132647         CDS       T07893                                  Name (RefSeq) DNA-binding protein SMUBP-2-like   KO K19036   ATP-dependent RNA/DNA helicase IGHMBP2 [EC:5.6.2.5 5.6.2.3] Organism hrf  Haliotis rufescens (red abalone) Brite KEGG Orthology (KO) [BR:hrf00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03009 Ribosome biogenesis [BR:hrf03009]     124132647    03012 Translation factors [BR:hrf03012]     124132647 Enzymes [BR:hrf01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      124132647     5.6.2.5  RNA 5'-3' helicase      124132647 Ribosome biogenesis [BR:hrf03009]  Eukaryotic type   Other ribosome biogenesis factors    124132647 Translation factors [BR:hrf03012]  Eukaryotic type   Initiation factors    Initiation associated factors     124132647 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_11 AAA_12 SMUBP-2_HCS1_1B AAA_30 AAA_19 R3H Viral_helicase1 ResIII zf-AN1 Helicase_RecD AAA_22 nSTAND3 DEAD AAA_16 IstB_IS21 SLFN-g3_helicase UvrD-helicase Flavi_DEAD AAA_25 Glyco_tranf_2_3 AAA ABC_tran ATPase PhoH NTPase_1 Zot UvrD_C_2 MeaB Motif Other DBs NCBI-GeneID:  124132647 NCBI-ProteinID:  XP_046352610 LinkDB All DBs Position Unknown AA seq 1037 aa AA seqDB search MTLELFVRKTLDLLNKEREAEVEETRVLTEKLPPKELQRRGVCLLKLRLAGRNSGLYGRT LVTFEPFWAGKDFPSHNLTPGDIIGLTLSQGETQNEALASGIVSKVGQSQISIAFDETHD IFSLDDEVQYKLTKLANDVTYRRLKRALNDLNNYSSGRASCLVNVLFGVSELSPPTDPTD IKYVNESLDTSQREAVEFALRQRELSVIHGPPGTGKTTTVVEIILQAVRRGMKVVACAPS NVAVDNLVERLSHHLQKILRIGHPARLLPHIQKYSLDAIVSGSDENKLVHDVRRDLDKAI SKVKQTRNKGEKQGLREEMRHLRKELVRREETATREILRRADVVLVTLTSASNAGPLRLL DEEHFDLVVIDECSQALEAACWMALLRAPRCVLAGDHHQLPPTILSHEAARGGLELTLME RVLKEQGEEVVRMLTTQYRMNENIMQWSSDQLYNGRLIAHDSVKTHLLRDLPGVSDCEET SCPLLLVDTAGCDLSELELPEEVSKGNEGEADIVASHVEKLISSGLQPENIAVIAPYNLQ VELLRVRLSPTYPKLEIKSVDGFQGREKEAVVISFVRSNSKGEVGFLSENRRINVAITRA RRHVAVICDSETVSHDKFLKTLVEYFTERGEVWSAQEYIQDGKVTHTSSRPEQLENLLSV KSSTKQKSASKGEGHKQRKGDKGHQKQVKKPGQRSNEGGARPKQPASDEGAVRDVEEKEA EYVKYLEDFLANPDQTYLDFPASLNSHDRLVVHQLSEKLGLLHNSKGEGKDRHIVVSKPG IEGQEVKVVTSETTGQGHKPDVKVKTKPNRKEQKNTQDKENKQINDSSVMPDGIETDTPE EVPCGINGDHVEKKRDKVTCEICGKEVLNANIQLHSVHCARQVKAKLTQGQGQPSKDEVK SKKKTKNTKQDAALHRTASALEKIDDDDFDSLIATVQKLDNRCCFTKCKQFTTTLGHTCD FCLRRFCLAHHIPEIHGCGADAKVAARQAMVKEGILFRGNVAPQRKLDPNKRAGLQRKLD KKLDDMAGKRSSKTSKK NT seq 3114 nt NT seq  +upstreamnt  +downstreamnt atgacgttagagctttttgttagaaaaactcttgatttgttgaataaggaaagagaagca gaagttgaagaaaccagggtgctaacggagaaactaccacccaaagaattacagagacga ggagtgtgtttgctgaaacttcgtttagctggaagaaattcaggtctctatggaagaaca ttagtgacgtttgaacctttctgggctggaaaagatttcccttcacacaatctcacccca ggtgatatcatcggtctgactttatcccagggagaaactcagaatgaagcactggcttct ggtattgtgtcaaaggtgggacagtcacagataagcattgcttttgatgagacacacgac atcttcagtcttgatgatgaagtccagtacaagctcaccaagcttgccaatgatgtgacc tacaggcgcctcaagagagcactgaatgacctgaacaactactccagtggccgagcatcc tgtcttgtcaatgttctgtttggcgtttcagagttgtctccccctactgacccaacagac atcaagtatgtgaatgagtccttggatacctctcagagagaggctgtagagtttgcactg cgacagcgtgaactgtcagtgatccatggtccccctgggacggggaagacgaccacggtg gtggagatcatcctccaggcagtcaggaggggcatgaaggtggtggcatgtgctccgtct aacgttgctgtcgacaatctggtcgagcgtctgtcccatcatctacaaaagattttgagg atcggccaccctgcccgtctgctcccgcatattcagaagtactccctcgatgccatcgtc tctggaagtgacgagaataaactggtgcacgatgttcggcgagaccttgacaaggccatt tccaaagtgaagcagacgcgcaacaagggagagaagcagggtttgcgggaggagatgcga catctccgcaaggagctggtccggagggaggagacggccaccagggagatactgcgacgc gctgatgttgtcttggtgacactgactagtgcctctaacgccggacctctgagacttctg gatgaggaacactttgacctggttgtcatcgatgaatgttcccaggcacttgaggctgcg tgttggatggccctgctccgggctcctcgctgcgtgttggctggggatcaccatcagctg cctcccactatactctcacatgaggcagcaaggggtggcctagagctgacgctgatggag cgagtgttgaaggagcagggggaggaggtggtgaggatgctgacgacgcagtaccgtatg aacgagaacatcatgcagtggtcctccgaccagctatacaatggtcgacttattgctcac gattctgtcaagacacatctgctgagagacctgcctggtgtgagtgactgtgaggaaacc agttgtcccctgctgctggtggatacagccggttgtgacctgtctgaactggaattacct gaagaagtgtccaagggaaatgaaggtgaagctgatattgtggcctcccatgttgagaag ttaatctctagtggtctgcaacctgagaatattgcagttattgccccttataaccttcag gtggagctgctgcgtgtgagactgtcgccaacctaccctaaactggagatcaagtccgtg gacggcttccaggggagggagaaggaagctgtagtcatctccttcgtcagaagtaattca aagggtgaagtgggcttcctgtccgagaatcgtagaataaatgtggccatcactcgagca cggcgccatgtcgcagtgatctgtgacagcgaaacggtcagccatgacaaattcctcaag accctggtggagtacttcacagagaggggcgaagtctggtcagcccaggaatacattcaa gacggcaaagtcacccacacaagttcccgtcctgaacaactggagaatctgttatctgtc aagtcttccaccaagcagaaatcggctagcaaaggtgaaggtcacaaacagcgtaaaggt gacaagggtcaccagaagcaggtgaagaaaccaggtcaaaggtcaaatgaaggaggagct agaccaaagcaaccagcttctgatgagggtgctgtgcgtgatgtggaagagaaggaggcg gagtatgtcaagtacctcgaggacttcctagccaaccctgaccagacgtacctcgacttc ccagcgtctctaaactcccatgacaggctggttgtacaccagttatcggagaaacttggc ttactccacaacagtaaaggagaagggaaagacaggcacattgtcgtatccaaacctgga attgaaggtcaggaggtcaaggttgtgacctctgagacaacaggtcaaggtcataaacct gatgtcaaggtcaaaactaagccaaatagaaaggaacagaagaatacacaagataaggaa aacaagcagattaatgacagcagtgtaatgcctgatggtatagagacagatacacccgag gaggttccttgtgggattaatggtgatcatgttgaaaagaaaagggataaagtaacttgt gaaatatgtggtaaggaggtcctgaatgcaaacatccaactgcattctgttcattgtgct agacaggtcaaggccaaactaactcaaggtcaaggccaaccatccaaagatgaggtcaaa tctaagaaaaagacaaaaaacacaaaacaggatgcagctttacaccgtaccgcatctgcc ctagaaaaaattgatgacgatgattttgacagtttgatagcaaccgtacagaaacttgac aataggtgctgctttacaaaatgtaaacagttcaccacaaccctgggtcatacgtgtgac ttctgtttgagaaggttctgcctggcccaccacattccagagatccatggatgcggagcg gatgccaaggtagcggccaggcaggccatggtgaaggaaggaatcctctttcgggggaat gttgcaccacagagaaaactggaccctaacaagcgagctggcctgcagagaaagctggac aagaaactggacgacatggcaggaaagcgttcatcaaagacgagcaagaagtga

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