Haliotis rufescens (red abalone): 124132663
Help
Entry
124132663 CDS
T07893
Name
(RefSeq) protocadherin-11 X-linked-like isoform X1
KO
K16498
protocadherin delta 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
124132663
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hrf01009
]
124132663
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hrf04515
]
124132663
Protein phosphatases and associated proteins [BR:
hrf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124132663
Cell adhesion molecules [BR:
hrf04515
]
Cadherins
Protocadherins
124132663
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Fibulin_C
CNOT1_HEAT_N
TMEM154
DUF4446
Motif
Other DBs
NCBI-GeneID:
124132663
NCBI-ProteinID:
XP_046352641
LinkDB
All DBs
Position
Unknown
AA seq
1158 aa
AA seq
DB search
MTVKMASKCVSKCVCVLFLQVCLIVLCRSQDSVITYHIPEEQDIGWFVGNLARDSTLYLT
IDESEFQRMKFNFFTQGNPYVKLFHMDEKSSTIRTAEVIDREEVCSFKILCEMKLEIAVY
IRDPKRGTYDLYKLMQVKMVVDDINDNTPMFPHKVIHLSVPESVPVNHRLLASGAIDKDM
GQNNSVQEYQLIPRNGMFGLDVVKNLDGSADLAIIVKHRLDRETRDFFQLMVKAMDGGMP
QKTGSAIINITVTDVNDNRPAFLDSTFNVSIQENKPKNSTVVVVSAVDQDAGSNGKISYY
FSQRVSQTVRQSFAIDERTGIVFANGPIDYETQTQFQFMVEAKDHGNPSLSSLAAVIINI
LDVNDNYPHISINLAPEASHISEGMETGKFIAHVSVSDADVGMNSLVMCSLNDHHFALEK
FYENLQNIYKVVLAQRLDHETAATHKVTITCKDQGDPPKSNSTSFIITVMDENDNAPVFS
GHSYSGSIIENNSVGEEILQVTANDWDGGENGRVTYSLDSAGKNYFSIIPDTGIIKAIKS
IDRERYPELHFHVVATDHGQSPKSSSSAVSIDVIDQNDEPPRFTKPVFFCYVQEHKPVGT
KAGNVSAYDPDNYRNAEYIYKLAPDSKMSEFFSVDTWNGIITTLKEFDREKQHMFNFSVI
VQDSQVPSFRDVANVSVFILDANDHKPMITYPSQSNNSVSVPYNTQIHTIIAHVKAHDTD
DMTYSRLYFKITEGNSRNIFHIDRISGELEVSSPMMPIDAGSHQLIIAVQDNGNPPKTAY
AELNIIVTANGTAATLNSSKDDNMLIVIILVAVTVVLTLAILTTICMIKRIDKDRQRTQV
VVLKGEDEKMFDEKKRDSFSSVSRDSNENEDAEMKKKNGRKEVSFTFDEDKEAHNTSGSS
GIGSFSTFRCQNPEQQDPNNLQDAPSHGIPTSDSDIPSPAPDQADRQWAPPTNGVEARTL
LEILKKNEIDVSSEMSGETGTSDSGHGGSEEDLHAKTGQAQETEETKPGQFFPTTFHGGS
SRVPVYNDGRQSRNGRKTAPSTLRGSRSQNFRSQPQQFPSNPRTFETMDNGYHYNTAPHP
PRSAQADNVLHTFSSPKSECKHFQPRHLDFVPGSSRGRPETPIRIEEDRSSTSGSYTLNS
NRRTPDIDHMMFSSDVVV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaagatggcatcaaagtgtgtttccaaatgtgtgtgtgtcttgttccttcaa
gtttgtttaattgtgctgtgtcgttcgcaggattctgtgatcacttatcatattccagag
gaacaggacattggatggtttgttgggaatcttgcacgagacagtacgttatatttaaca
atagatgaatctgaatttcagagaatgaagtttaattttttcactcaaggaaatccgtat
gtgaaactatttcatatggatgagaagagcagtacaataagaactgcagaagtcattgat
cgggaagaggtatgctcatttaaaatattgtgcgaaatgaaactggaaattgctgtttat
attcgtgatcccaaacgcggcacctatgatctgtacaagctaatgcaggtcaagatggtc
gtggatgacatcaatgacaacactcccatgtttccacacaaagtcattcatctctcagtc
ccagaatcagtacccgtcaaccatcgcctccttgccagtggtgccattgacaaggacatg
ggtcagaataattcagtccaagagtaccaacttattccaagaaatggcatgtttggtctt
gatgttgtgaaaaatctggatggaagcgctgatcttgctattattgtgaaacatagacta
gacagagaaacacgcgacttcttccaactgatggtcaaagcaatggatggaggtatgcca
cagaaaactggttctgccatcatcaatatcacagtcacagatgttaatgataaccgccct
gctttcctagactcaacattcaatgtaagcatccaggaaaataagcccaaaaattccaca
gtggttgtcgtgtcagcagtcgatcaagacgcaggaagcaatggcaagatatcatactac
ttcagtcaacgagtatcgcagacagtgcggcaatcatttgcaattgacgagaggactggt
attgtttttgcaaatggaccaatagattatgaaactcagactcagtttcagttcatggtg
gaagcaaaagatcatggcaatccgtcgctgtcttctctggcggccgtcatcatcaacatt
ctcgatgtcaatgataactatccccacatcagcatcaatctagccccagaagctagtcac
atttctgaaggtatggagacaggcaagttcatcgcacatgtgtcagtgtcagatgcggat
gtgggtatgaacagtcttgtcatgtgtagcctcaatgaccatcactttgcattagaaaag
ttttacgaaaacctacaaaatatatacaaggttgtactggcgcaaagacttgaccatgaa
acagctgccactcataaggtcaccataacatgcaaggaccaaggtgaccctccaaagtcc
aattcaacaagtttcattattactgtaatggatgaaaatgataatgctcctgtctttagt
ggtcattcctacagtgggtcaatcattgagaataactcagtgggggaggagattctccag
gtaactgccaatgattgggatggtggggaaaatggccgtgtgacttactctctagacagt
gctggaaaaaactacttctccattattccggatacaggtattatcaaagctatcaaatcc
attgaccgggaacgctaccctgaacttcatttccacgttgttgcaacagatcatggtcaa
agccccaagtcatcatcttcggctgtttctatcgatgtcattgatcaaaatgatgaacct
ccacgattcaccaaacctgttttcttctgctatgtccaagaacacaaacctgttggcacc
aaggcaggtaatgtttctgcctatgatcctgacaattaccgaaatgctgagtacatctac
aaattggcaccggattcaaagatgtctgagtttttttctgtggacacttggaatggaatc
atcacaaccttgaaggaatttgatcgtgagaagcaacacatgtttaacttttctgttatt
gttcaggatagccaagttccaagtttccgagatgttgcaaatgtctcagtcttcatcttg
gatgcaaatgatcataaaccaatgataacatatcccagccaatccaataacagtgtgtct
gttccatacaacacacaaattcatactattatcgcccatgtaaaggcccatgatactgat
gatatgacatacagtcgactatatttcaaaattactgaaggcaattcaagaaacattttt
catatagatcggataagtggggaacttgaagtgtccagtccaatgatgcccattgatgct
ggcagccatcaactgatcatcgcagtccaagataatggtaatccccctaaaactgcttat
gctgagttgaatattatcgtaacggcaaatggtaccgcggcaacattgaactcatctaaa
gatgacaacatgctaattgttatcattttagttgctgtcacagtggttctgacattggcc
attctgacaacaatttgcatgataaagagaattgataaagatcgccaaagaacacaagta
gtggtcctgaaaggagaagatgagaaaatgtttgatgagaagaaacgcgacagtttctcc
tcagtgtcacgtgactctaatgaaaatgaggatgctgaaatgaaaaagaagaatgggcga
aaagaagtcagtttcacgtttgacgaggacaaagaggctcacaatacaagtggttcatca
ggaattgggtcattctcaacattcaggtgtcagaatccagaacaacaggatcccaataat
ctccaggatgctccgagtcatggaattcccacgagtgatagcgacattccctccccagct
ccggaccaggctgatcgacagtgggcaccgcctaccaacggcgttgaggctcgaactctg
cttgaaatactgaaaaagaacgagatcgatgtttcaagtgagatgtcgggggagacaggt
acaagcgacagtggtcatgggggcagtgaagaagaccttcacgccaagacaggtcaagca
caggaaacagaagaaaccaagccaggccaattcttccctacgacattccatggtggcagt
agtcgtgttccagtctacaacgatggtcgtcaatcccgcaacggtcgcaagacagcgcca
tctacactccggggctcaagaagtcaaaacttccgctcacaaccccaacagtttccatcc
aatccaagaacatttgaaacaatggacaatggctaccattataacacagccccacaccca
ccaaggtcggcacaggctgacaatgtccttcacacatttagtagccccaagtcagaatgc
aaacactttcaacctcgccatttagactttgtcccagggtccagtcggggacgaccagag
actccgattcgtatcgaggaggatagaagttccacttcggggagttataccttgaattcc
aatcgaaggacaccagacattgatcacatgatgtttagcagtgatgtggtagtgtga
DBGET
integrated database retrieval system
