Haliotis rufescens (red abalone): 124132680
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Entry
124132680 CDS
T07893
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit pan3-like isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124132680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124132680
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124132680
mRNA degradation factors
3'-5' decay
Pan complex
124132680
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
zf-CCCH_4
Pkinase
zf-CCCH_2
zf-CCCH_9
Torus
TBPIP
Motif
Other DBs
NCBI-GeneID:
124132680
NCBI-ProteinID:
XP_046352688
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MTSAVPPGKKAALCRYYLNTGSCIYGDECQFLHQAPPGMQNSYSNGPSSSNGEPGLESMP
NNGDQYFNATFGSIPEFQPFSGRQRPRSRNVVLGSLSQNAKPFVPAGPPGPPGPGGLDQN
MANDFQALNLAGTPVPPGKGTPADFVKSAASLSHSSSTPSFTTYSSMFNTSTSSTPTSHI
AASSAYLFPVYSSASPNHSPGISPSGSPLTLRRTASPVAPLRQTTVPQKPQQHPQAPGGG
PGGAGGPGGPGGPGGPGGPGPGGPGGGGGTIQENFGGTTYFYHPDDFAPQYEGVQLPNFT
MYPGLPPHIAHMKVKVNMPQFFMPDEIKMELLNRHALTLAQIDPTQNPDVPTEVDNYHNL
FPLEPPPTTQLPKSSTFTYPTTCYKALNTKDGLTYCLRRVHGFRLANAKCMPLIDMWKKM
FHPNIVQLKEVFTSKAFGDSSIIFVYDYFPGAENLMSRHFNTPPTMNGYSSPFQGGEGPP
PGAGARPYSAGKGTGANANNSGMNGPRQHAGLLPESLIWTYVVQLSSALRAIHATGLACR
ALDPTKILVYSKSRMRLNCMGIMDVLTFDSNQANPLALIPHYQQEDLVALGRICLALACN
NIMGVQRDHLPAAMDLVARNYSPDLKNLILYLLTNQNRPRSINDVMPMIGARFFTQLDAA
QLRTDVLENELAKEVENGRLFRLLVKLGAINERPEFNMDPSWSETGDRYILKLFRDYLFH
QVDESGAPWIDLAHVIQCVNKVDAGVPEKICLMSRDEQSILVVSYAEIKRCFESAFSELL
NAGHQPSPFS
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgacaagtgcggttccccctggaaaaaaagccgcactatgccgctattacttaaacacg
gggtcatgtatttatggggatgagtgtcaatttctacatcaagcccctccaggaatgcaa
aattcgtattcgaacggacccagttcctcaaatggagaaccaggtctggagtccatgcct
aacaatggggatcagtatttcaatgctacctttggttccataccagagtttcagcctttc
tcagggagacaaaggccaagatcaagaaacgtcgtacttggatccctgtcccagaatgcc
aagccatttgtccccgcagggccaccgggtccccctgggcctggggggttggatcaaaac
atggccaatgactttcaagcgttgaacctggcaggaacccctgttccccccgggaagggt
accccggctgactttgtgaagtcagcagcatctttgtctcacagttccagcactccatct
ttcactacgtactcttccatgttcaacacttccacgtcatccactcccaccagtcacata
gctgccagtagtgcttatttgtttccagtttactcatctgccagtccaaatcacagccct
ggtatatctccaagtggttccccactgacgctgagaagaactgcatcgcctgtggcgccg
ctgcgacagaccacagtgccccagaaacctcagcagcacccacaggcaccggggggagga
ccagggggcgccggtggacctggtggacctggtggacctggaggacctggaggacctgga
cctggaggacctggagggggagggggcacaatccaagaaaactttggagggacaacatac
ttctaccatcctgatgattttgctcctcagtatgaaggagtgcaattgccaaatttcacc
atgtacccagggctgcctccccacattgctcacatgaaggtcaaggtcaacatgccacag
ttcttcatgcctgatgaaatcaagatggaacttcttaacagacatgccttaacactggca
caaattgaccctactcagaatccagatgtaccgacggaggtggacaactaccacaacttg
tttcccctggagccgccgcccaccacgcagctccccaagtccagtaccttcacatatccc
accacctgctataaggctctcaacaccaaagatggacttacatactgtcttagaagggtt
catggcttccgattggctaacgcaaagtgtatgccgctgattgacatgtggaagaagatg
tttcatcccaacattgtgcaattgaaggaggtcttcacctctaaagctttcggtgatagc
tctattatctttgtgtacgactacttccctggagccgagaacctgatgtcacgccatttc
aacacacctcccacaatgaatggctacagcagtcccttccagggtggggaagggcctcca
ccaggagccggtgcccgcccctacagtgctggcaaagggacaggagcaaatgccaacaac
tcgggcatgaacggccctcgccaacacgctggtctgctacccgagtcgctcatctggacc
tatgttgtccaactgagttcagcactccgtgccatacatgccactggccttgcctgcaga
gccctcgaccctaccaagatccttgtctacagcaagtccaggatgcgcctgaactgcatg
gggatcatggatgtgctgacctttgacagtaaccaggccaacccactagcattgatacca
cactaccagcaagaggatcttgttgccctcggccgcatctgtctggcactggcctgtaac
aacatcatgggggtacagcgagatcacctgccagccgccatggatcttgttgccaggaac
tactcacctgacctgaaaaatctcatcttgtatcttctgaccaatcagaatagaccaaga
agtatcaatgacgtgatgccaatgattggagcccgattcttcactcagcttgatgctgct
caacttcgaacggatgtgttggagaatgagttggccaaggaagttgaaaatggccgccta
ttccgtctgctggtgaaacttggtgcaattaacgagagacctgagttcaacatggacccg
agttggtcagagactggagatcgctacatcttgaagctgtttcgtgattacctgttccac
caagtggatgagagtggtgcaccatggattgatcttgctcatgtcattcagtgtgtcaat
aaggttgatgcaggtgtcccagagaagatttgtctgatgtcgagagacgaacagagcatc
cttgtcgtgtcctacgctgaaatcaaaagatgttttgagagtgctttctctgagctgctg
aatgccgggcaccagccgtccccgttctcatag
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