Haliotis rufescens (red abalone): 124134013
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Entry
124134013 CDS
T07893
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hrf03041
]
124134013
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124134013
Spliceosome [BR:
hrf03041
]
Complex C
Other components
Complex C specific factors
124134013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
Cas3-like_C_2
AAA_19
AAA_30
nSTAND3
ABC_tran
AAA_29
Motif
Other DBs
NCBI-GeneID:
124134013
NCBI-ProteinID:
XP_048253674
LinkDB
All DBs
Position
Unknown
AA seq
704 aa
AA seq
DB search
MTTRFTPKFWKPGTAGPGQGLQEERQSTKDAEAQPVKYNPNQSMSIEQQRQKLPVFQHRS
HILYLVERYQTVVIIGETGSGKSTQIPQYLLEAGWAAEGHVIAVTQPRRVAAITVADRIA
EERGTLLGDEVGYMIRFDDCSDPNNTRMLFLTDGMLIREIMKDPLLRKYSIIMVDEAHER
SINTDILLGLLRKIQKKRNDLKVIVASATLNAEEMRDFFNSNDTKEPLNDTATILTVEGR
EFPVDIHYLLDPHPDYLKATVETVMKIHFNQREGDVLAFLTGQEEVQRVVSMLIDEAKKL
KKDDLKMKVLPMHGSLPASEQMKVFERTSRYVRKIVVATNIAETSITINGIVYIVDCGFV
KIKAYNPTSGIESLVIVPVSQASANQRAGRAGRVRAGKAYRLYTETAYDGLPESTVAEMQ
RSDLAPVVLQLKALGISNVLRFHFLSAPPAQNMLRGLELLYALGALDDNGNLTSPLGLQM
AEFPLSPMFAKMLLVSGEFECSEEALTVAAMTQIQNVFVTPSGQKIRMDKAKRRFSCEEG
DHVSLINIFNAFLKYGKNSKWCHEYFLNYKGLCRAVEIRNQLHRLLKKYNVPLNSCEDNV
DAIRRCITASFFSNAAKLHYTGVYKTVRDEHVLNIHPTSVLFPEAPPQWVVFNEVVQTSK
DFMRDMTVIKPEWLCELAPHFYQLGTERELASKKLKTDTDEEDD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccagatttacgcccaaattctggaaaccaggaactgctggtccaggtcagggg
ttacaggaagagagacagtcaaccaaagatgcggaagcacagcctgtcaaatataacccc
aaccaatcaatgtctatagaacaacagagacagaagctgccagtgtttcagcataggagt
catatcctgtatctggtggagaggtaccagacggtggtgatcattggggagacaggcagt
gggaagagtactcaaatacctcagtacttgcttgaggctgggtgggctgctgagggtcac
gtgatcgctgtgacacaaccgagacgagtagcggccataacggttgcggaccgaattgcg
gaggagagagggaccctcctcggtgacgaagtcgggtacatgatccggtttgatgattgc
tctgaccccaacaacacacgcatgttgtttctcacagatgggatgctgatacgagaaata
atgaaagatccattactaagaaaatacagcatcattatggtggatgaagcacacgagaga
agcatcaacactgacatcctcctggggctgctacgcaagattcaaaagaagcggaatgat
cttaaagtgatagttgcatcagccacattgaatgctgaggaaatgagagatttcttcaac
agcaatgacacaaaagagccactgaatgacacagctaccatactgacggtggaaggccgg
gagttccctgtggacatccactacctcctggatccccaccctgactatctgaaagccacg
gtggagacagtgatgaagattcacttcaaccagcgggagggagatgtcttagctttccta
acaggccaggaagaagtacagagagtggtgtcaatgttgatcgatgaagcaaagaaactg
aagaaagacgacctgaagatgaaagtgttgccgatgcacgggagtttgccagcttcagaa
cagatgaaggtatttgagaggacatcccgttatgtcaggaagattgtcgtggcgaccaac
attgccgagacctccatcaccatcaacggcatagtttatattgtcgactgtggttttgtg
aagatcaaggcctacaatcccacttctggaattgagtcactggtgattgtccctgtgtcc
caggcttcagccaatcagagagcagggagagcgggacgtgtgcgtgcagggaaggcctac
agactgtacacagagacagcctatgacggcctgccggagtcgacagttgccgagatgcag
cggagtgaccttgcacctgtggtactgcagctcaaggctctcggcatctccaacgtcctc
cggttccacttcctgtcagcgccgccagcacaaaacatgctacgaggtctggagctgttg
tatgcacttggagccctggatgacaatggcaacttgacgtcccccctgggcctccagatg
gccgagttccctctgtcccccatgtttgccaagatgctgcttgtgtcaggagagtttgag
tgttccgaggaggcccttactgtggcggccatgactcagattcagaacgtgtttgtcacg
ccgtccggacagaaaataagaatggacaaagccaagagaagattctcctgtgaagaagga
gaccatgtgtcacttataaacatctttaatgcattcctgaagtatggtaagaactctaag
tggtgtcatgagtacttcctcaactacaagggtctgtgtcgggccgtggagattcgcaac
caacttcacagactcctgaagaagtacaacgttcctctcaactcctgtgaagacaatgtt
gatgcaatcagaagatgcatcacagccagtttcttctccaatgctgccaagctgcactat
actggtgtttacaagacagtgagagacgaacatgtccttaacatacatccaacatccgtc
ctctttccagaagctcctcctcagtgggtggtgtttaatgaggtcgtgcagacttctaag
gacttcatgcgtgacatgacggtcatcaaaccagaatggctgtgtgagctggcgccacat
ttctatcagctcggcacagagcgggagcttgcaagtaagaagctgaagactgacacagac
gaggaagatgattga
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