Haliotis rufescens (red abalone): 124134203
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Entry
124134203 CDS
T07893
Name
(RefSeq) nuclear cap-binding protein subunit 1-like
KO
K12882
nuclear cap-binding protein subunit 1
Organism
hrf
Haliotis rufescens (red abalone)
Pathway
hrf03013
Nucleocytoplasmic transport
hrf03015
mRNA surveillance pathway
hrf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124134203
09122 Translation
03013 Nucleocytoplasmic transport
124134203
03015 mRNA surveillance pathway
124134203
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrf03019
]
124134203
03041 Spliceosome [BR:
hrf03041
]
124134203
Messenger RNA biogenesis [BR:
hrf03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
124134203
Spliceosome [BR:
hrf03041
]
Common components
Common spliceosomal components
Cap binding complex
124134203
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G_like
MIF4G
MurL_epimerase_C
ParcG
Motif
Other DBs
NCBI-GeneID:
124134203
NCBI-ProteinID:
XP_046354877
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MSRRRRASYSDDEDDGPSRKRRRQSDVVDIEDRLESLITRVGEKSTSSLESNLEGLASVL
EADLPNYKHKILRILCECVVGMPEKLSVYTTLIGLLNAKNYNCGGEFIEMLVRNLKEALK
TAEFENARMIVRFLSDLVNCHVLVSGSLLQMFDNFIEVTLEDNIPQVRSDWYVYCVLTAL
PWVGQELHEKKETELSKLLATVDNYISKRQHIHVPALRVWATDDPHPQEEYLDCLWAQIK
NLRNNKWVEKQILRPYLAFDSVLCDALQHTLPQIIPPSHNEEIEYPLPTVTFRLFDYTDV
PEGSVLPGSHAIERYLIEEHLHKIIHTYYIERKDCAATLLSFTSKNKIPLNYMIVEVVFS
QLFQLPRPPYIEILYGSLFIELCKLQPGSMPQVLAQATEMLFERIDEMHTACIDRFTSWF
SYHLSNFQFRWSWDDWATCKDLDLERPKPKFIREVFLRCLRLSYHQRLVDVVPETFANLI
PIKPQPFFKYEQAGAGSLPGTTEAHALMAAIKSKCLPDEAAQVLKDLPNPLADDDRVDEP
PYHPLKIDVFVSTLLYLGSKSFSHSFAALAKFHPYLKSLGETEEAQICILKSLYEVFKTH
QQILVVLVDKLVRTQVVECSSVANWLFSNEMLPDFTCFFVWEIMHGTIHKMSNQVGKLQR
KVEDAKDKLEAAQRRLADGLELDPIEDEDVPTLEQIDRMEEKLEATQNQQKRLFLIIFQR
FIILLTEHLARCEGAGIDYNTPWYKWVIERLQQIFLQHHKLVYKYISTLETLLFTADIDI
HILEIFQQFCALRS
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgacgacgaagagcatcttacagtgacgatgaagatgatggtccatcacgtaaa
aggagacgtcagtcagatgttgtggacattgaagatcgcctggaatctcttatcacaaga
gtaggagaaaagagtacttcatcccttgagagcaacttggagggactggccagtgtgctg
gaagcagacttgcccaactacaagcacaagatactgagaatcctctgtgaatgtgtggtg
ggaatgccggagaagctgtctgtctacacaacattgattggtttgttgaacgcaaagaac
tacaactgtggaggagagttcatagaaatgttggttcgcaacttgaaagaagctctgaag
acagccgagtttgaaaatgcacgcatgattgtgcgcttcctgtccgacttggtcaactgc
catgtgctggtgtcagggtcgctgctgcagatgtttgacaacttcatcgaggtgactctt
gaggacaacataccacaggttcgatctgactggtatgtgtactgtgttctgacggccttg
ccttgggtcggacaggaactgcacgagaagaaggagactgagctcagtaagctcctggcc
accgtcgacaactacatcagcaaacgtcagcacatccatgtgccagcactgagagtgtgg
gctaccgatgaccctcacccacaggaagaatacctggactgtctgtgggcacagatcaag
aatctgcgcaacaacaagtgggtggagaagcagatcctgcgcccctacctggccttcgac
agtgtgttatgtgacgccctgcagcacactctcccccagatcatacccccctctcacaac
gaggagatcgagtaccccctacccaccgtcacattcagattgtttgactacacagatgta
cccgaggggagtgttttgccggggagccatgccattgagagatacctgattgaggagcat
ctccacaagatcatccacacatactacatcgagaggaaggactgtgcagcaacattgctg
agtttcaccagcaagaacaagatcccccttaactacatgatagtggaggtcgtgttcagt
cagctgttccagctgccacgcccaccctacattgagatcctgtacggctctctcttcatc
gagttgtgcaagctacagccaggctccatgccacaagttcttgcccaggcgacagaaatg
ttgttcgaaagaattgatgaaatgcatactgcctgcatagacagatttacgagttggttt
tcgtaccacttgagtaatttccagttccggtggagctgggacgactgggccacatgtaaa
gaccttgaccttgagagacccaaacctaagttcatccgagaagtcttcctgcgttgtctc
aggctatcctaccaccagcggctggtggacgttgtgcccgagaccttcgctaatctcatc
cccattaagccgcagccattcttcaagtacgagcaagccggagcagggtccctgcctggg
acaacggaggcacacgccctcatggcagccatcaagtccaagtgtctgccagacgaggcg
gcacaggtcctcaaagacctgcccaaccctctggctgatgacgacagagtggatgagcca
ccttatcatccgctgaagatcgatgtgtttgtgtcaaccctgctctacttgggaagcaag
tcatttagtcattctttcgcagcactcgccaaatttcacccctacctgaagtccttggga
gaaaccgaagaggcccagatttgcattctgaagagtctgtacgaggtgtttaagactcac
caacagattttggtggtgcttgtggacaagctggtgaggacgcaggtcgtggagtgctcc
tccgtggccaactggcttttctcaaatgagatgctccctgacttcacctgtttctttgta
tgggagataatgcatggcacaatccacaagatgagcaaccaggtgggaaagttacaacgc
aaagtagaggacgccaaggataagctggaggcggcacagcggaggctagcagatggcctt
gagcttgaccccatcgaggacgaagatgtgccaacactagagcagattgacaggatggag
gagaagctggaggcaacacagaaccagcagaagagactgttcctcatcatcttccagcgt
ttcatcatcctactgacggagcacctggcgcgctgtgaaggcgccggtattgactacaac
actccttggtacaagtgggtcatcgagagactccagcagatattcctccagcatcacaag
ttggtctacaagtacatcagtacactcgagacgcttctcttcacagccgacattgacatt
cacatcctggaaatatttcaacagttctgtgctcttcgatcataa
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