Haliotis rufescens (red abalone): 124134315
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Entry
124134315 CDS
T07893
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrf03021
]
124134315
Transcription machinery [BR:
hrf03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124134315
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_2
HEAT_EZ
TPR_Trm732_C
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
124134315
NCBI-ProteinID:
XP_046355020
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MTTRLDRLFLLLDTGSTPLIRKSAADQLGEVQKLHPYELHNLLSKVHGYLCSSNWETRIA
AGLAVEAISKHVPQWEPRGAPKSEFPSPSSAHVAGRILFSHFDINKVLAYGTSLLGSEGA
QYDVDMSAMALGDQESLIRQRQLLNKRLGLDIAGNLGIETDNIFNDEDLMAAQSNGQSSS
RNICSQPVADIVKQQLLDVMGGMSARERNRAKRRAKHIIKQKSRESQSCDGSTEGEPPNK
RQRPTTPSSEDGVDDKLVIDSTDTTLNFEEMEEWPFESFCELMMNDLFHTSWETRHGAAT
GLREVIKLHGRGAGKTNDTPADQLPAVNHIWLSDLALRVLCVLALDRFGDFVSDEVVAPV
RETCAQTLGVIVKYLDMQEVEGIVGVLLQLLGQGQWEVRHGGLLCLKYLLAVRQDMSNAL
LPKVLPAVFLGLQDPDDDVRAVAAAALVPVTDTLVTLMPEQTPHVIQCLWETLLDLDDLT
ASTNSIMTLLSTLLGHPLTAATATVTASLSELTPRLFPFLRHNIVSVRRAAIQTLSTLLT
IATPDTKQPVVRSWLCPILQDVLRHVFQRSLLEERQELLDLVQKVWGQLLRCAPLDYLVA
AVMPWLGVWLCLLMQPASLPFDPQYLIEAKHRVRDQQHNRGRSFPEPATVKEQKDFIGGT
ETVNSHTTDRDAVVINARQTAAKLLGQLASFITMPIPNFPADVEKPVESLAKLFVFHLNT
KSAQQRFVIAQVVYHWFLQSPTCECPTDVKTKILECLGEAIYFDEIAISFTRMQSDCQDF
IASLRQQGIPIDSIFQPGAILTLDQANHLTMGLFEQVKGSIKPRSLQTLEDRRKQLQVTV
DQTSHEQNTLTIRVLSSLALAAVVLDVLPEKLNPVIRPLMDSIKKEQNRSLQSEASKGLA
RLLSKCAQRNPSPNSKVLKNLCAFLCCDPSSTPIVSQTGVQKHTEPHPHEMTCDTHTGIL
TLTNMQKAPERSRRWYKRSVSVKVDTEGSSETNSEVEKQLRIQRQGSESALFTICQHFGN
TLPDNAPSLWETCTAAFQHRIDNSQTVESAQELVNSLQVLETIGPALHNDLVETIFSHLE
SIRSCIESHYTGVRHMAARCFAMLTQLRTTVLMMFIIEEILLMLGATDSETKRQGAVETF
ANIIDVLGMELVPYVVLLVVPILGRMSDQNEAVRLMATHCFASLIRLMPLEAGIPDPPEM
TAALVARKEKERQFLEQLMDSSKLKSYEISVPILAELRKYQQDGVNWLAFLNKYQLHGIL
CDDMGLGKTLQSICILSSDHLLREHEYTKSSSPDSTPIPSIVVCPPTLVGHWVYEVNKFV
DKQYLNPLMYAGPPGERQRLQKKVKKHNLIVASYDVVRNDIDFFSTINWNYCILDEGHII
RNGKTKLSKAVKMLVCNHRLILSGTPIQNNVLDLWSLFDFLMPGFLGTERQFQARYGKPI
LQSRDAKSTTKEQEAGALAMESLHRQVLPFVLRRLKEDVLQDLPPKIIQDYYCDLSPLQV
ELYEDFARSRVKKGIDETLQDDTDKKVNSQGTTHIFQALQYLRKVCNHPALVLNPNHPKF
ESVCQHLKQQNSSLKDLTHAPKLTALKQLLNDCGIGVTVSTPGGSTGHLGTDVPVVNQHR
VLLFCQLKGMLDIVEKDLLKCQLPSVTYLRLDGSVPAGSRHDIVHRFNNDPSIDMLLLTT
HVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKVVNVYRLITRGTLEEKIMG
LQKFKLTIANTVITQDNSSLQTMGTDQLLDLFTLGDKKKGESAASAAKDGALKRETMRTI
LENLGDLWDEKQYENEFNLDNFMKSLAK
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgagattagatcgcctgttcctgttgctggacacagggtctacgcctctcatc
cggaagtcggccgctgaccagctgggagaggtgcagaagctgcatccttatgagctgcac
aaccttctgtccaaggtacatggctacctgtgcagcagcaactgggagactcgtattgcg
gcaggattagcagtagaagccatctccaaacatgtcccgcagtgggagcccagaggagct
cctaaatcagagttcccatcaccctcgtcggcacatgtggctggccgcatcctgttctcc
cacttcgacatcaacaaggtgttggcatacgggacgtcgctgctcggatctgagggtgcc
cagtacgacgtggacatgtcagctatggcactgggtgaccaagagtccctcattcggcag
cggcagctgctgaacaagcgccttgggttggatatagctggcaacctcgggatcgagaca
gacaacatttttaatgatgaagatcttatggctgcacagagcaatggacagtccagcagc
aggaacatctgcagccagcctgtggcagacatcgtgaagcaacagctgctggacgtgatg
ggcgggatgagtgcccgggaacgcaaccgggctaagcggagggcaaaacacatcatcaaa
cagaagtctcgagagtctcagagttgtgatggcagtacagaaggcgaacctccaaataaa
cgacaacgcccaacaacgccatcaagtgaggatggagttgatgacaagctggtcatagat
tccacagacactacactaaactttgaggagatggaggagtggccattcgagtctttctgt
gagctgatgatgaatgacttgttccacacgtcgtgggagacgaggcacggggcagctaca
gggcttcgggaggtcatcaagcttcacggacgaggggcagggaagacgaacgacacgccg
gccgatcagttgcctgctgtcaaccatatatggctgtctgaccttgcccttcgagtccta
tgtgttctagctctggataggttcggagactttgtgtccgatgaggtggttgcgccagtt
agggagacttgtgctcagacactcggtgtcatagttaagtatctggatatgcaggaagta
gagggcattgtgggagttttattacagttgttgggtcaaggacaatgggaggttcgacat
ggaggattgctttgtctcaagtatctccttgctgtcagacaggacatgtcaaatgcgttg
ttgcccaaggttctcccagctgtgtttctggggctacaagatcctgacgatgatgtgagg
gcagttgctgctgccgctcttgtacctgttacagacacactcgtcactctgatgccagaa
cagacgccccatgtgatccagtgtttatgggagaccctgctcgacctcgacgaccttact
gcttcaactaactccatcatgacgctgctgtcaacgttgttaggtcatcccctcacagca
gcaacagcaactgtaactgcatccctgtctgaactgacacctcgcctcttccccttcttg
cggcataatatagtgtccgtgcgacgtgccgcgatacaaacactgtccacgctcctcacc
attgccaccccagacacaaaacagccagtggtgcggagctggctgtgtccgatcctgcag
gacgtgctgcgtcacgtcttccagcggagtctcctggaggagcggcaggagttgcttgac
ctagtgcagaaggtgtggggtcagctgctccggtgtgcccccctcgactacctggtggct
gccgtcatgccctggctcggggtctggctttgtctcctcatgcagccagctagcctcccc
tttgacccccagtacctcatcgaagccaagcatcgtgttcgggatcagcaacacaatcgg
ggacggtcgttcccagagcctgccacagtgaaagaacagaaagattttataggtggcaca
gagacagtcaacagtcacaccacagacagagatgctgtcgtcatcaacgcccgacaaact
gcagctaaattactgggtcagttggcctccttcataacaatgccaatccccaacttccct
gctgatgtagagaaacctgttgaatcacttgccaaactgttcgtcttccacctcaacaca
aagtccgcccagcaacgttttgtaatagcacaagtagtctaccattggtttctgcagagt
ccaacctgtgaatgtcctacagatgttaaaaccaaaatcctagaatgtttaggtgaagca
atatactttgatgaaatagcaatatcgttcactcggatgcaatcggactgtcaagacttc
atcgccagtctacgacagcaggggatcccgatagactccatcttccagccaggagcgata
ttgacccttgaccaggcaaaccacctgaccatgggtttgtttgagcaggtgaagggctcc
atcaagccccggtcgctgcagacgttggaggacagacgcaaacagctgcaggtgacggtc
gaccagaccagccatgaacagaatacactgacaatacgggtactgagtagccttgcactg
gcagcggttgtgctggatgtgctcccggagaaactgaacccagtcatcagacccctcatg
gacagcatcaagaaggagcagaaccggagtctccagagtgaagcttccaagggtctagct
aggttgctgagtaaatgtgctcagcggaaccccagtccaaactccaaggtgctcaagaac
ttatgtgcattcctctgctgtgacccctcatctacccccattgtctcacaaacaggggta
cagaaacatacagaaccgcatcctcatgagatgacatgcgacacacacactggcattctg
acgctcaccaacatgcagaaggctccggagcgtagtcggagatggtacaagcgcagtgtc
agtgttaaggtggacactgaaggatcgagtgaaaccaactcggaggtcgagaagcaactc
cggatacagcgccaggggtcagagagtgccttgttcacaatatgtcagcacttcggcaac
actctgccagacaatgctccatcactctgggaaacctgtactgctgcattccaacataga
atagataatagccagacggtagaatcagctcaagagttagttaactctttacaagtattg
gagactataggtcccgctcttcacaacgatctcgtagaaacaatatttagtcacctggaa
tccattaggtcatgtatagagagtcattacaccggcgtgcggcacatggcagccagatgt
ttcgccatgttgacgcagctgcgcaccacggtgttgatgatgttcattatagaggagata
ctgctgatgcttggagctacggacagcgagacgaagagacagggggccgtggagactttt
gccaacatcattgatgtgctggggatggagctggtgccgtatgtggtgctgctggtcgta
ccgatcctggggcgcatgtcagatcagaatgaggctgtacgcctgatggctacacactgc
tttgcttctctcatcagactcatgcccctagaggccggtatccccgacccgcctgagatg
acggcggcgctggtggcaaggaaggagaaggagagacagttcctggagcagctgatggac
agctccaagctcaagagctatgaaatctccgtccccatcctggccgaactacgcaagtat
cagcaggatggcgtgaactggctggccttcctcaacaagtaccagctacacggtatcctg
tgcgatgacatggggctggggaagacactgcagtccatttgcatcctctccagcgaccac
ctcctccgggaacacgagtacacaaagtcttcaagtccggacagcacaccaatcccatct
attgttgtgtgtccgcctaccttggtgggccactgggtgtatgaggtgaacaaatttgtg
gacaagcagtatctcaaccccctcatgtatgctgggcctcctggggaaagacagagactg
cagaagaaagtgaagaagcacaacctgattgttgcctcctatgatgtggtcaggaacgac
atagacttcttcagcaccatcaactggaactattgtatattggatgaaggtcatattatc
aggaatggaaaaacaaagctgtccaaggctgtgaagatgctggtgtgtaatcaccgcctg
atcctgtccggaactcctatacagaacaatgttctggacctgtggtctctgtttgacttc
ctgatgccgggattcctgggcacggagcggcagttccaggcccggtatgggaagccgatc
ctgcagagtcgggatgccaagagcacaaccaaggaacaggaagcaggtgccctcgctatg
gagtctctccaccgacaagtgctgcccttcgtcctgcgccgcctcaaggaggacgtgctg
caggacctgcccccgaagatcatccaggactactattgtgacctcagtcccctccaggtg
gagctgtacgaggacttcgcccgctcacgtgtcaagaagggcatcgatgagaccctgcag
gacgacacggacaagaaagttaactctcagggaactactcatatattccaagctctgcag
tatctgcggaaggtgtgcaaccacccggccctcgtgctcaaccccaaccaccccaagttt
gagtcagtctgccagcacctcaagcagcagaactcgtccctgaaggatctcacacacgcc
cccaaactcacagcactcaaacaattactaaacgactgcggtatcggtgtcactgtgtca
acacctgggggcagcactggtcatctcggtacagatgtaccggttgtcaaccagcatcga
gtgctgctcttctgtcagctgaaaggcatgctggatatagtagagaaagatttgctcaaa
tgtcagttgccatcggttacctacctccgtctagatggaagtgtccctgctggctccaga
catgatattgtacacagattcaacaacgatccgtctatagacatgcttctgctcaccacc
catgtcggagggctgggcctcaacctgaccggggccgacactgtgatatttgtggaacat
gactggaaccccatgaaggatttgcaggctatggacagagctcatcgtattgggcagaag
aaggtggtaaatgtttatcgtctcatcacccgtggcaccctggaggaaaagatcatgggg
ctgcagaagttcaagttgacaatagccaacaccgtgatcactcaggacaactccagcctg
cagaccatgggcaccgaccagctgctggacctcttcaccctgggggacaagaagaagggg
gagagtgccgccagcgcagccaaggacggcgccctcaagcgggagaccatgagaaccatc
ctggagaacctgggggatctctgggacgagaagcagtacgagaacgaattcaacctggac
aacttcatgaagtctctggccaagtag
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integrated database retrieval system
