Haliotis rufescens (red abalone): 124134873
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Entry
124134873 CDS
T07893
Name
(RefSeq) uncharacterized protein LOC124134873 isoform X1
KO
K18409
ATP-dependent RNA helicase TDRD12 [EC:
5.6.2.5
]
Organism
hrf
Haliotis rufescens (red abalone)
Brite
KEGG Orthology (KO) [BR:
hrf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hrf03036
]
124134873
Enzymes [BR:
hrf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
124134873
Chromosome and associated proteins [BR:
hrf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124134873
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TUDOR
DEAD
Helicase_C
ARM_ARMC5
CS
ARM_PUB
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
124134873
NCBI-ProteinID:
XP_048253457
LinkDB
All DBs
Position
Unknown
AA seq
2056 aa
AA seq
DB search
MTMNNMGDNWQDITITEITDPGNFLAKECPGMNMSKECRQFNRMQDQMNQFFSNEQAVTT
IPPQPSVGDVYAGKRQSDRQWYRVEVERIMQTSRGPQASCYFVDHGESELIPVSFLRQLP
DHFCEVPRQIQKFSLWAIEPVTLTTTIEDGDIMATKQRCRKWDISAVDFLKRLVKDSSST
KVDIQHQDQERNTVYVKLYLNTPDGQICVNDQLVELEYAAKTVPKVHQPALNASEEIVKP
RRQKKKMTQEDYLRMIEDDRFNHQNTDSDSSHKAHSDPQVRHKVYRKTIIYDRSRDCESD
SPVRHRGARSDMFMSDTEHHHNTRSGGSLLQVSQSDTDLPRGLLNSRPHSGGRGKWLEGG
DGGQGNISLNKLMIDGATGGSDRLGVVLTGTSGDANSSSCFGKNVKGAESKHCYENALSD
PGQPKKIMLGRGFSFLSTSSDSDSPAKRTCDTKISYSSPNKTSSASMRVGMPVLETQSGD
SDTNSLASLMGLKPVRSSPGGAIPDSSSQSDRKSTEAPRDENFCEIFVPSRLPKCAMVSS
QSCSSKSESPEMKLGSILKKSPSPSTSSLEVNTVRFSKSGTQEWVRKKGKEEGRKLLQSL
SAGVGMRDHNISTIPQMSRPDRLEHTPFLGVVYHGVSQPSPILDFTNLPFTERVKQAFLK
KKFTSPMTIQAYCWPAVRRGRHVIGISPPGTGKTLAYLLPLLTQLSESKPYMPVPVGNGP
YALILVPSWKKAQNVFDACTDYLQGQKMPRVISIFAGGCEDSKVVPLINGCEVLVATPPC
LQRMMEKKYTNLSRLCHLVLDDAEILTEVFKSEVKYIMKTYADVVRESTLKRDVPRQRMV
FASQWTKGIDSFIAAYIHQPLLVITSKMEAAVYGQVKQIVHMCKYENRSYQLRSILEGIG
TPGNKIILCSSLVEEVEMLYGMLTTQSMHTLVCHDDMSLSDRDDMYRQWHNLNSRDAALI
MVMTDECVTDSNITDATHVIHYNLPKSKTRFGNRMACMLNFFYDFSKPQESSVTPTSYIF
VTDRNKKEVKSLASFLERSNSEIPKAMSSYMAGMQMGENEDEDKDLCRHIKAFGFCVNIN
KCQYRHRILPVSDCPRGRGFKDLPRTGEVKVRMNHILDANHYYVRLLEHRGEQKTDLNGI
YISLLFDIASFFANKNNCRSQSMAKKGELCAIRSNEQDFHRVEILKIMESEGLQTPTAKV
WYVDDGKTEIVDLCKLLTLPGHLKEVPYQAVEVYLCRVKPMDKDSEWTPRANMFIFEQLD
EITELEACVVLSFGNTLWLDPLVQRVTMETIKMTTNHMRVRDELLKNGLGSNNPKHIEQL
YQLCRECQVEVPRELLAKYLSGYEKTIDTESLPEDQEYHDIYVSAVVSPDLIFVQRKEHV
KQFEEMLDEINDKMAKVEMEFDKDLSLCPGTYCLAQFTQDDRWYRGQVIEKLSNDLYNVF
FCDFGDNDSLSPSRLCPLPDKYAGLPCQAIACKLAYVEPRGDNWDNNSGDALWDMTHFLT
GEKKLLVAKILSKSAETSSGSYKYTIDLHDTNSTMDVHLPQELVWKRYASSPSLKDLMPK
PLSASRKIYDSPVHKLKDLCAAIYWGENEDVVIKKSKEVSTIVTSQNKTSAVEAMVSCGG
AAAVCRLIGYLRCLEAHQHIVQSLTLAILFSPRICEVTIAENVPQMLVRCLEQSNFPALH
KQAAKAISRLVTVSSYKVALERADATTTLCDLLDVTDNSQIQGLSLHALACLLKESQSVS
QAVMETPVCRKVPDLLNGENTHDVIEAALTFLASLAHWQNAHSELKRDVLVDAVIQRLED
TRCCKCVHQVVLLCHHLAQASRKNKTLLLEHRLVIVLQGVLQRDLEDHTTRKLCQELEAS
IAVRLPKQQQTLNHSRLLYDEEQDTNYVAVSWYQNTFRVVLTVRLKGISREDFTISHQHV
TFRSSKHNKSFDYELFEEILPQKTDIDVHENQTSVSLKKQIKGKWSRLLRQKQKPIGLTV
DFEKFVNSDSEVSDEDVPFLLSRRRERKLPDCSKGQHRKHRKPIVMDDLETTSENTSDLA
SYSDDEKKDDATYDFR
NT seq
6171 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgaacaacatgggagacaactggcaagatattacaatcacagagattacagat
cctggcaacttcctggccaaagaatgcccgggaatgaacatgtcaaaggaatgtcgccag
ttcaacagaatgcaggatcagatgaaccagtttttcagcaatgagcaagccgtgaccacc
attccaccccagccttctgtgggggatgtgtacgcagggaagcggcagagtgacagacag
tggtaccgcgtggaggtggagaggatcatgcagacatccaggggaccacaggcttcctgc
tactttgtggaccacggtgaatcggagctgatccctgtttccttcctgcgacaattacca
gatcatttttgtgaagtgcccaggcagattcagaagttttccttatgggctattgagcca
gtgaccctcactaccaccattgaagatggggatatcatggcaacaaaacaaaggtgtaga
aaatgggacatctctgctgttgatttcctaaagagacttgtgaaagattcgtcaagcacg
aaggttgacatccagcaccaggaccaggagaggaacactgtgtacgtgaagctgtacctc
aacactccagatgggcagatctgtgtgaatgatcagctcgtggagcttgagtatgcggca
aagaccgtccccaaagtacaccaaccagctctcaatgctagtgaggaaattgtcaaacca
agacgacagaagaagaaaatgacccaagaagattatctcaggatgattgaagacgacagg
tttaatcaccaaaacactgattcagacagtagtcacaaagcccacagtgacccacaagtc
cgacataaggtatacaggaagacaataatatatgacaggagtcgagattgtgagagtgac
agtccagtccgacatcggggagccaggtccgacatgttcatgtcagacactgagcatcat
cataacaccaggtcagggggatcactgctgcaagtcagtcagagtgacacggacctaccc
aggggcttgctgaacagcaggccacactctgggggacgggggaaatggctggagggaggg
gatggagggcagggaaacattagtttgaataaactgatgattgatggtgctaccggtgga
tctgatagacttggagtggtgttgacagggacttcaggagatgcaaactcctcgtcttgt
ttcggaaagaatgtgaaaggtgctgagtctaaacattgttatgagaatgccctgtctgac
cctggccaacccaagaagattatgttaggaagggggttttccttcttaagcacctcgtca
gactcggacagtcctgctaagagaacatgtgataccaagatttcttattctagtccaaac
aaaacgtccagtgcctctatgcgtgtggggatgccagttcttgaaactcagagcggagac
tcggacacaaactctctagccagtttaatgggtctgaaaccagttagaagtagcccaggc
ggcgcaatcccagacagttctagtcaaagcgatagaaaatctacagaggccccccgagat
gaaaatttctgtgaaatatttgttccatctcgcctccccaaatgtgcaatggtgtcttcc
cagtcctgttcttccaagtcagagtcccctgagatgaagcttgggtcgatcctgaagaag
tctccctccccatctacatcaagcctagaagtaaacactgtcagattctccaagtcagga
acacaagaatgggttcgcaaaaaaggcaaagaagaagggagaaaattgctgcagagcctg
tcagcaggtgtgggcatgagggatcataacatatctacaataccccagatgagtcgtcca
gatcgtttggaacacacaccgttcttgggggtcgtgtatcatggggtgtcacaacccagt
cccatcctggacttcaccaatctgccctttacagaacgtgttaaacaggcattcctgaaa
aagaaattcacaagtccgatgacgattcaggcgtactgttggcctgctgtgcgtcgaggc
cgccacgtgattggcatctcgccaccagggacagggaagacattggcatatctgctgcca
ttgttgacgcagctctccgagtccaagccatacatgccagtgcctgttggaaatggaccc
tatgccctgatactcgtcccgtcatggaagaaagcccagaatgtgtttgatgcctgcaca
gactacctacaggggcagaaaatgccaagagttatttccatcttcgctggtggatgcgaa
gattcaaaagtggtcccactgattaatggttgtgaagtccttgtggccacaccaccttgt
cttcaacgcatgatggaaaagaagtacacaaacctcagccgtctctgccatcttgtgctt
gatgatgccgaaatacttaccgaagtgttcaagtctgaggttaagtatataatgaaaacg
tatgctgacgttgtccgagaatctaccttgaaacgagatgttccgcgtcagagaatggtg
tttgcgagccagtggaccaagggaatcgactccttcatagccgcctacatccatcaaccc
ctactggtcatcacgtccaagatggaggcggctgtgtacggccaagtcaagcagattgtg
cacatgtgcaaatacgaaaataggtcctaccagctgcggagcatcttagagggcatcggg
acgcctggcaacaagataatcctttgttcatctctggttgaggaagtggagatgctgtat
gggatgttgacgacccagagcatgcacaccttagtctgccatgacgacatgtcgctttcg
gaccgtgacgacatgtaccggcagtggcacaacctcaactccagggacgccgcactcatc
atggtgatgacagatgaatgtgtaacggacagcaacatcaccgacgccacacatgtcatc
cactacaacctgccgaaatcaaaaactaggtttggcaacagaatggcgtgtatgctgaac
tttttctatgacttctccaagcctcaagagtcatcggtcacgccaacatcctacatattt
gtgacagacagaaacaagaaggaagtgaagagcttggccagcttcctggagcggagcaac
agtgagattcccaaggccatgtcaagctacatggccggcatgcagatgggagagaacgag
gatgaagacaaggacctctgcagacacatcaaggcttttggattctgtgtgaacatcaac
aagtgccagtatcgacatcgtatccttcctgtcagtgactgtcctcgtggccggggattc
aaagacctgcccagaactggggaagtcaaggtgaggatgaatcacatccttgacgccaac
cactactacgtgagacttctggagcaccggggagaacagaagaccgacctcaacggcatt
tacatctcactcctctttgacatcgcaagcttcttcgctaacaagaacaactgcaggtca
cagtcgatggccaagaagggggaactttgtgccatccggagcaacgaacaagacttccat
agagtggaaatcctcaaaataatggagtctgaagggctccaaactcccacagcaaaggtg
tggtatgttgacgacggcaagacagaaattgttgatctgtgcaagctcctcacactgcca
ggccacctgaaggaagtcccttaccaggctgtggaggtgtacctgtgtcgtgtgaagccc
atggacaaggactcagagtggacacccagggccaacatgttcatctttgagcagctggat
gagatcacggagctggaagcatgcgttgtactcagcttcgggaacaccctgtggctggac
cccctagtccagagagttaccatggaaaccattaagatgaccaccaaccatatgcgagtc
cgagatgagctgctcaaaaatggccttggatctaacaaccccaagcacatagagcagctg
taccagctctgtagggagtgccaggtggaggtgcccagagaactcctggctaaatacctc
tcaggatatgagaagacaattgacacagagtctctgcctgaggatcaagaataccacgac
atctacgtgtcggcggtcgtctcacccgatctcatcttcgtgcagcgcaaagaacatgtg
aagcagttcgaggagatgctggacgagattaatgacaagatggccaaggttgagatggag
tttgacaaggatttgtctctctgcccggggacatactgcctggctcagttcacacaagat
gacaggtggtaccgaggacaggtcattgagaagctgtctaatgacctgtacaatgtcttc
ttctgtgactttggtgacaatgacagcttgtccccttcccgactctgccctctcccagac
aagtacgctggccttccttgtcaagccatagcatgcaagcttgcctatgtggaaccaagg
ggagacaactgggacaataatagtggcgatgcattgtgggatatgacacactttttgaca
ggggagaagaaactccttgtagccaagatattgtccaagtctgctgagacttcaagtgga
tcctacaagtacacaatcgacctgcacgacaccaactccacaatggacgtccacctcccc
caggagctggtgtggaagagatacgcctcctctccgagtctcaaggatttgatgcccaag
cctttgtctgcaagtcgaaagatctatgacagccctgtgcataaactcaaagatctgtgt
gctgccatctactggggcgagaatgaagatgtggttatcaagaagagcaaagaggtttcc
acaattgtcacctcccagaacaagacaagtgctgttgaggccatggtgtcctgtggtgga
gccgctgccgtgtgtcggctcattgggtatctgcgctgtcttgaagcccaccagcacatc
gtccagtctctcacacttgccatactcttctcaccaagaatctgtgaagtgaccatagct
gaaaatgtgccacagatgcttgttaggtgtttggagcagagtaacttcccagcgctccac
aagcaggcagccaaggccatctcgagactggtgactgtcagcagctacaaggtggcgcta
gagagggctgacgccacgacaacgctgtgtgacctgctggatgtcactgacaactcacag
atacagggcttgtctctccatgccctggcatgtctcctcaaggaatctcaaagtgtaagc
caggctgtgatggagacgccagtgtgcaggaaggttccggacttgctgaacggggaaaac
acgcatgacgtcatcgaggcggccctcaccttcctggcaagtctggcacactggcagaat
gcccactctgagctgaagagggacgtcctagtggatgccgtgatacagaggctggaggac
accaggtgttgcaagtgtgtccaccaggtggtgctgctgtgtcaccatcttgcacaggca
agtcgcaagaacaagacgctgttgttggagcacaggcttgtcatcgtgctacagggtgtc
ctgcagcgggacctggaggaccatacaacaaggaaactgtgccaggaactagaggcctcc
attgctgtacggttgcccaagcaacagcagacactcaatcattccaggctgctctacgac
gaggaacaagacacaaattatgttgctgtgagctggtaccagaacaccttccgagtcgtc
ctcactgtcagactgaagggaatctcccgggaggacttcaccatctctcaccaacatgtc
actttcagatcatcaaaacacaacaaatcttttgactatgagttgtttgaggaaattctg
cctcagaagacggacatagacgtccacgagaaccagacttccgtctccctcaagaagcag
atcaaggggaagtggagccgtctgctccgacagaaacaaaagcccattggcctgacggtg
gacttcgagaagtttgtcaactccgactcggaggtgtctgatgaagatgttcccttcctc
ctctccaggcggagagagaggaagttgccggattgctccaaggggcagcacaggaagcac
aggaagcccatagtcatggatgatctcgagaccacctcggagaacacgtcagacctcgcc
tcgtacagcgacgatgagaagaaggatgatgcaacctatgacttccggtag
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integrated database retrieval system
